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The map label for this gene is ssb [H]

Identifier: 118578889

GI number: 118578889

Start: 472424

End: 472855

Strand: Reverse

Name: ssb [H]

Synonym: Ppro_0449

Alternate gene names: 118578889

Gene position: 472855-472424 (Counterclockwise)

Preceding gene: 118578893

Following gene: 118578888

Centisome position: 11.8

GC content: 60.42

Gene sequence:

>432_bases
ATGGCCAGTCTCAACAAAGTAATGCTGATCGGAAATCTGGGCAGGGACCCGGAGGTGCGCTACACCGCATCCGGTCAGGC
CGTTGCCAGCTTCAACCTGGCGACCACCGAAAAATTCAAGAACAGGAACGGGGAATGGGAGGAGCGCACTGAATGGCACC
GGGTGACCCTCTGGGCCCGTCTGGCCGAGATCGCCGGGGAGTACCTCTCCAAGGGCAAAACCGTCTACATCGAGGGACGC
CTACAGACCAGGGAATACGAGAAGGACGGTATCAAGCGCTATACCACCGAGATCGTGGGAGAAAAGATGCAGATGCTCTC
CCCCAAGGGTGAGCGCCGCAGCAGTGGTGATTCCTACTCCCCCGCACCGGCGGGCACCAGTGGCGGCGGCTATGAACCGC
CCCCCTTCCAGGATGACGACATTCCGTTCTGA

Upstream 100 bases:

>100_bases
AGCCTTGCATCTGAGGTATTGTTTGCAAAAAATTGCACAGTCTGTTTTGGGGCGAGGGAGGTCCTGTCCACGCGCCCTTT
TACACACAAGGAGCACAACC

Downstream 100 bases:

>100_bases
CGACTACCCCTTTTGTTTTGCCAAAAATACAAGCCGTAAAACCTCATGGTTTTGCGGCTTGTGCCGTTTCAGGACGAGAA
AAAGGGCATCCGATATCAAA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MASLNKVMLIGNLGRDPEVRYTASGQAVASFNLATTEKFKNRNGEWEERTEWHRVTLWARLAEIAGEYLSKGKTVYIEGR
LQTREYEKDGIKRYTTEIVGEKMQMLSPKGERRSSGDSYSPAPAGTSGGGYEPPPFQDDDIPF

Sequences:

>Translated_143_residues
MASLNKVMLIGNLGRDPEVRYTASGQAVASFNLATTEKFKNRNGEWEERTEWHRVTLWARLAEIAGEYLSKGKTVYIEGR
LQTREYEKDGIKRYTTEIVGEKMQMLSPKGERRSSGDSYSPAPAGTSGGGYEPPPFQDDDIPF
>Mature_142_residues
ASLNKVMLIGNLGRDPEVRYTASGQAVASFNLATTEKFKNRNGEWEERTEWHRVTLWARLAEIAGEYLSKGKTVYIEGRL
QTREYEKDGIKRYTTEIVGEKMQMLSPKGERRSSGDSYSPAPAGTSGGGYEPPPFQDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=115, Percent_Identity=32.1739130434783, Blast_Score=70, Evalue=8e-13,
Organism=Escherichia coli, GI1790494, Length=178, Percent_Identity=43.2584269662921, Blast_Score=121, Evalue=1e-29,
Organism=Drosophila melanogaster, GI85725234, Length=103, Percent_Identity=31.0679611650485, Blast_Score=66, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24647376, Length=103, Percent_Identity=31.0679611650485, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16069; Mature: 15938

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLNKVMLIGNLGRDPEVRYTASGQAVASFNLATTEKFKNRNGEWEERTEWHRVTLWAR
CCCCCEEEEEECCCCCCCEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHH
LAEIAGEYLSKGKTVYIEGRLQTREYEKDGIKRYTTEIVGEKMQMLSPKGERRSSGDSYS
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAPAGTSGGGYEPPPFQDDDIPF
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASLNKVMLIGNLGRDPEVRYTASGQAVASFNLATTEKFKNRNGEWEERTEWHRVTLWAR
CCCCEEEEEECCCCCCCEEEECCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHH
LAEIAGEYLSKGKTVYIEGRLQTREYEKDGIKRYTTEIVGEKMQMLSPKGERRSSGDSYS
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAPAGTSGGGYEPPPFQDDDIPF
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]