| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is comM [H]
Identifier: 118578722
GI number: 118578722
Start: 277065
End: 277994
Strand: Reverse
Name: comM [H]
Synonym: Ppro_0280
Alternate gene names: 118578722
Gene position: 277994-277065 (Counterclockwise)
Preceding gene: 118578723
Following gene: 118578721
Centisome position: 6.94
GC content: 64.95
Gene sequence:
>930_bases ATGCTTGCCAAAGTTCTCAGCAGCACCCTGATCGGGATCGACGCCATCATCGTCGATGTGGAGGTTGACCTGGCCCCCGG CCTGCCGGCTTTCGCCACCGTGGGGCTGCCGGACGGCGCGGTCAGGGAGAGCAAGGACCGGGTGCGGGCCGCGCTGAAGA ATTCGGGGTACGATTTCCCTACCCGGCGTATCACCGCAAATCTGGCGCCGGCCGATATCAGGAAAGAGGGGGCAGCCTTC GACCTCCCCATCTCCATCGGTATCCTGGCCGCCAGCGGGGTGATCAGGACCACCAGGTTGCAGCAGTTCATCCTGCTGGG GGAGCTCTCCCTGGACGGCAGCCTCAAGGCAGTGCGCGGGGCACTCTCCATGGCGGTGGCAGCCAGGCGGGCAGGTCTTT CCGGCATCATCCTGCCCCAGGAGAACGCCTGCGAAGCCGCCGTGGTGGAGGGAATCCAGGTCATCGGCGCCATGACCCTC TCCCAGGTGGTGGAATTCCTCTGCGACCGGATCAGCATCGAGCCGTACCGCATCGACCTGCAGGAGCTCTTCAGCAGGAG CTGCGGCTATGCCGAGGACTTCAGCGAAGTCAAAGGGCAGGAGCATGCCAAGCGGGCCATGGAGGTGGCTGCCAGCGGAG GCCACAACCTGCTGATGATCGGGCCGCCCGGTTCGGGCAAGACCATGCTGGCCCGCCGCATCCCCACCATCCTGCCGGCC ATGTCCTTCGAAGAGGCCATCGAGACCACCAAGATCTTCAGCGTCAGCGGCCTTTTGGAGCGTGAGTACGCCCTGCTGGC TGCGCGCCCCTTCCGTTCACCGCACCACACCATCTCCGACGTTGGACTGATCGGCGGCGGCACCACCCCCAAGCCGGGCG AAGTGTCCCTGGCCCACAACGGCGTACTGTTCCTAAACACGACAACTTAA
Upstream 100 bases:
>100_bases CATGCTGAAACCATAGAGTTTGATGGGCTCTATGACTTCGATGGGGTGACTCCGCTAACTCATTGAACTTATAGACCCCA TACACCTCAAGAGGTTAGCC
Downstream 100 bases:
>100_bases TAATCCCCATCCACTCAAAATTTCATATCCACAGAAATGGATCTTTGGTTCAAGGAGCTTCATAGCAATGAAGTGAATAT AAACCTGGAGGGATACTTTT
Product: magnesium chelatase, ChlI subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFPTRRITANLAPADIRKEGAAF DLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRGALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTL SQVVEFLCDRISIEPYRIDLQELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHNGVLFLNTTT
Sequences:
>Translated_309_residues MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFPTRRITANLAPADIRKEGAAF DLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRGALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTL SQVVEFLCDRISIEPYRIDLQELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHNGVLFLNTTT >Mature_309_residues MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFPTRRITANLAPADIRKEGAAF DLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRGALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTL SQVVEFLCDRISIEPYRIDLQELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHNGVLFLNTTT
Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]
COG id: COG0606
COG function: function code O; Predicted ATPase with chaperone activity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]
Homologues:
Organism=Escherichia coli, GI145693202, Length=305, Percent_Identity=45.9016393442623, Blast_Score=258, Evalue=4e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR001208 - InterPro: IPR004482 - InterPro: IPR000523 - InterPro: IPR020568 [H]
Pfam domain/function: PF01078 Mg_chelatase [H]
EC number: NA
Molecular weight: Translated: 32700; Mature: 32700
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00318 HMG_COA_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFP CHHHHHHHHHHCEEEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCC TRRITANLAPADIRKEGAAFDLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRG CCEEEECCCCHHHHCCCCEEECCEEEEEEHHCCHHHHHHHHHHHHHEECCCCCCHHHHHH ALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTLSQVVEFLCDRISIEPYRIDL HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECH QELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA HHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCC MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHN CCHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCCCCHHHCEEECCCCCCCCCEEEEEEC GVLFLNTTT CEEEEEECC >Mature Secondary Structure MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFP CHHHHHHHHHHCEEEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCC TRRITANLAPADIRKEGAAFDLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRG CCEEEECCCCHHHHCCCCEEECCEEEEEEHHCCHHHHHHHHHHHHHEECCCCCCHHHHHH ALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTLSQVVEFLCDRISIEPYRIDL HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECH QELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA HHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCC MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHN CCHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCCCCHHHCEEECCCCCCCCCEEEEEEC GVLFLNTTT CEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 9457884 [H]