Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is comM [H]

Identifier: 118578722

GI number: 118578722

Start: 277065

End: 277994

Strand: Reverse

Name: comM [H]

Synonym: Ppro_0280

Alternate gene names: 118578722

Gene position: 277994-277065 (Counterclockwise)

Preceding gene: 118578723

Following gene: 118578721

Centisome position: 6.94

GC content: 64.95

Gene sequence:

>930_bases
ATGCTTGCCAAAGTTCTCAGCAGCACCCTGATCGGGATCGACGCCATCATCGTCGATGTGGAGGTTGACCTGGCCCCCGG
CCTGCCGGCTTTCGCCACCGTGGGGCTGCCGGACGGCGCGGTCAGGGAGAGCAAGGACCGGGTGCGGGCCGCGCTGAAGA
ATTCGGGGTACGATTTCCCTACCCGGCGTATCACCGCAAATCTGGCGCCGGCCGATATCAGGAAAGAGGGGGCAGCCTTC
GACCTCCCCATCTCCATCGGTATCCTGGCCGCCAGCGGGGTGATCAGGACCACCAGGTTGCAGCAGTTCATCCTGCTGGG
GGAGCTCTCCCTGGACGGCAGCCTCAAGGCAGTGCGCGGGGCACTCTCCATGGCGGTGGCAGCCAGGCGGGCAGGTCTTT
CCGGCATCATCCTGCCCCAGGAGAACGCCTGCGAAGCCGCCGTGGTGGAGGGAATCCAGGTCATCGGCGCCATGACCCTC
TCCCAGGTGGTGGAATTCCTCTGCGACCGGATCAGCATCGAGCCGTACCGCATCGACCTGCAGGAGCTCTTCAGCAGGAG
CTGCGGCTATGCCGAGGACTTCAGCGAAGTCAAAGGGCAGGAGCATGCCAAGCGGGCCATGGAGGTGGCTGCCAGCGGAG
GCCACAACCTGCTGATGATCGGGCCGCCCGGTTCGGGCAAGACCATGCTGGCCCGCCGCATCCCCACCATCCTGCCGGCC
ATGTCCTTCGAAGAGGCCATCGAGACCACCAAGATCTTCAGCGTCAGCGGCCTTTTGGAGCGTGAGTACGCCCTGCTGGC
TGCGCGCCCCTTCCGTTCACCGCACCACACCATCTCCGACGTTGGACTGATCGGCGGCGGCACCACCCCCAAGCCGGGCG
AAGTGTCCCTGGCCCACAACGGCGTACTGTTCCTAAACACGACAACTTAA

Upstream 100 bases:

>100_bases
CATGCTGAAACCATAGAGTTTGATGGGCTCTATGACTTCGATGGGGTGACTCCGCTAACTCATTGAACTTATAGACCCCA
TACACCTCAAGAGGTTAGCC

Downstream 100 bases:

>100_bases
TAATCCCCATCCACTCAAAATTTCATATCCACAGAAATGGATCTTTGGTTCAAGGAGCTTCATAGCAATGAAGTGAATAT
AAACCTGGAGGGATACTTTT

Product: magnesium chelatase, ChlI subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFPTRRITANLAPADIRKEGAAF
DLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRGALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTL
SQVVEFLCDRISIEPYRIDLQELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA
MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHNGVLFLNTTT

Sequences:

>Translated_309_residues
MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFPTRRITANLAPADIRKEGAAF
DLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRGALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTL
SQVVEFLCDRISIEPYRIDLQELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA
MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHNGVLFLNTTT
>Mature_309_residues
MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFPTRRITANLAPADIRKEGAAF
DLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRGALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTL
SQVVEFLCDRISIEPYRIDLQELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA
MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHNGVLFLNTTT

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=305, Percent_Identity=45.9016393442623, Blast_Score=258, Evalue=4e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 32700; Mature: 32700

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00318 HMG_COA_REDUCTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFP
CHHHHHHHHHHCEEEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
TRRITANLAPADIRKEGAAFDLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRG
CCEEEECCCCHHHHCCCCEEECCEEEEEEHHCCHHHHHHHHHHHHHEECCCCCCHHHHHH
ALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTLSQVVEFLCDRISIEPYRIDL
HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECH
QELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA
HHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCC
MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHN
CCHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCCCCHHHCEEECCCCCCCCCEEEEEEC
GVLFLNTTT
CEEEEEECC
>Mature Secondary Structure
MLAKVLSSTLIGIDAIIVDVEVDLAPGLPAFATVGLPDGAVRESKDRVRAALKNSGYDFP
CHHHHHHHHHHCEEEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
TRRITANLAPADIRKEGAAFDLPISIGILAASGVIRTTRLQQFILLGELSLDGSLKAVRG
CCEEEECCCCHHHHCCCCEEECCEEEEEEHHCCHHHHHHHHHHHHHEECCCCCCHHHHHH
ALSMAVAARRAGLSGIILPQENACEAAVVEGIQVIGAMTLSQVVEFLCDRISIEPYRIDL
HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECH
QELFSRSCGYAEDFSEVKGQEHAKRAMEVAASGGHNLLMIGPPGSGKTMLARRIPTILPA
HHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCC
MSFEEAIETTKIFSVSGLLEREYALLAARPFRSPHHTISDVGLIGGGTTPKPGEVSLAHN
CCHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCCCCHHHCEEECCCCCCCCCEEEEEEC
GVLFLNTTT
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]