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The map label for this gene is yoqW [H]

Identifier: 118578633

GI number: 118578633

Start: 190921

End: 191637

Strand: Reverse

Name: yoqW [H]

Synonym: Ppro_0189

Alternate gene names: 118578633

Gene position: 191637-190921 (Counterclockwise)

Preceding gene: 118578634

Following gene: 118578618

Centisome position: 4.78

GC content: 52.3

Gene sequence:

>717_bases
ATGTGCGGTCGTCTGGTCATTGATCTGTCACCGGAAATGATCACTGAGATTTACGGGATCATCAGGGACATCGAGCGCGA
ACTAAATCCGAGATATAACGTTACTCCATCCCAGACCATACCAATTGTCAAAGTTGATGCGGATGGTGGCCGGGAGCTTG
CTTTCGTCAGATGGGGACTCATTCCGTCCTGGGCGAAAGATATCGCGATCGGCAATAGCCTGATCAATGCCCGGTCGGAG
ACCGCCGCGGAAAAACCGTCATTCAGGTCTGCTTTCAAGCGTCGGCGCTGCATCATTCCGACGGGAGGGTTTTATGAATG
GCAGCGGCAGGATGGGAAACGAAAACAGCCATGGTATTTCCGGATGGCTGATGGAAGTCCGGTGTCGATTGCGGGGTTAT
GGGAGCATTGGCAGGGGAGCGATGGACAGGTTATCGAGTCCTGTTCCATCCTGACAACCAGCGCCAATGAACTGATGGCA
CCAATCCATGAGAGGATGCCGGTGATTCTCAGTCATGAGTGTCAAGCGGCCTGGCTCAATCCGAAGCTTACAGATGTTGC
AGTACTGCAGGAGTTTTGCCGGCCTTGCTCTTCAGAACTACTGAGTGCGTATCCTGTTTCGTCACTGGTAAACAGTCCGA
AAAACGATTCTGCTGAATGTATCGTCCCCGTCAGAATCCTTGGCAGTTCCAAAGGGCAGATAACCGATTGCAGATGA

Upstream 100 bases:

>100_bases
GTTCGGAAGTCTTTTGGGCAACAATGATGAGAAGGGTTCACACGTAATCTCGCCGGCTTGGAAGCCGGAGGGAATCAGGA
ACGTGCAAGTGAGGTAAGCC

Downstream 100 bases:

>100_bases
CTTCGATCAGCTGCCTGACGAAATTATCGACGAATTTTACAAGTAGCGCAAAAAAAGTTCATGGCTGTACCTTATCAATA
AACTCAACTTTCGCAGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MCGRLVIDLSPEMITEIYGIIRDIERELNPRYNVTPSQTIPIVKVDADGGRELAFVRWGLIPSWAKDIAIGNSLINARSE
TAAEKPSFRSAFKRRRCIIPTGGFYEWQRQDGKRKQPWYFRMADGSPVSIAGLWEHWQGSDGQVIESCSILTTSANELMA
PIHERMPVILSHECQAAWLNPKLTDVAVLQEFCRPCSSELLSAYPVSSLVNSPKNDSAECIVPVRILGSSKGQITDCR

Sequences:

>Translated_238_residues
MCGRLVIDLSPEMITEIYGIIRDIERELNPRYNVTPSQTIPIVKVDADGGRELAFVRWGLIPSWAKDIAIGNSLINARSE
TAAEKPSFRSAFKRRRCIIPTGGFYEWQRQDGKRKQPWYFRMADGSPVSIAGLWEHWQGSDGQVIESCSILTTSANELMA
PIHERMPVILSHECQAAWLNPKLTDVAVLQEFCRPCSSELLSAYPVSSLVNSPKNDSAECIVPVRILGSSKGQITDCR
>Mature_238_residues
MCGRLVIDLSPEMITEIYGIIRDIERELNPRYNVTPSQTIPIVKVDADGGRELAFVRWGLIPSWAKDIAIGNSLINARSE
TAAEKPSFRSAFKRRRCIIPTGGFYEWQRQDGKRKQPWYFRMADGSPVSIAGLWEHWQGSDGQVIESCSILTTSANELMA
PIHERMPVILSHECQAAWLNPKLTDVAVLQEFCRPCSSELLSAYPVSSLVNSPKNDSAECIVPVRILGSSKGQITDCR

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=275, Percent_Identity=29.4545454545455, Blast_Score=104, Evalue=7e-23,
Organism=Homo sapiens, GI54607104, Length=275, Percent_Identity=29.4545454545455, Blast_Score=104, Evalue=7e-23,
Organism=Escherichia coli, GI48994894, Length=233, Percent_Identity=31.7596566523605, Blast_Score=98, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6323761, Length=200, Percent_Identity=27, Blast_Score=85, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21355761, Length=248, Percent_Identity=29.0322580645161, Blast_Score=85, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 26608; Mature: 26608

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRLVIDLSPEMITEIYGIIRDIERELNPRYNVTPSQTIPIVKVDADGGRELAFVRWGL
CCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECC
IPSWAKDIAIGNSLINARSETAAEKPSFRSAFKRRRCIIPTGGFYEWQRQDGKRKQPWYF
CHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCEEECCCCCCCHHHHCCCCCCCCEEE
RMADGSPVSIAGLWEHWQGSDGQVIESCSILTTSANELMAPIHERMPVILSHECQAAWLN
EECCCCCEEEEEEHHHCCCCCCCEEHHCEEEEECHHHHHHHHHHCCCEEEECCCCEEECC
PKLTDVAVLQEFCRPCSSELLSAYPVSSLVNSPKNDSAECIVPVRILGSSKGQITDCR
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCCEECCC
>Mature Secondary Structure
MCGRLVIDLSPEMITEIYGIIRDIERELNPRYNVTPSQTIPIVKVDADGGRELAFVRWGL
CCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECC
IPSWAKDIAIGNSLINARSETAAEKPSFRSAFKRRRCIIPTGGFYEWQRQDGKRKQPWYF
CHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCEEECCCCCCCHHHHCCCCCCCCEEE
RMADGSPVSIAGLWEHWQGSDGQVIESCSILTTSANELMAPIHERMPVILSHECQAAWLN
EECCCCCEEEEEEHHHCCCCCCCEEHHCEEEEECHHHHHHHHHHCCCEEEECCCCEEECC
PKLTDVAVLQEFCRPCSSELLSAYPVSSLVNSPKNDSAECIVPVRILGSSKGQITDCR
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]