Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is 118578605

Identifier: 118578605

GI number: 118578605

Start: 167022

End: 168314

Strand: Reverse

Name: 118578605

Synonym: Ppro_0161

Alternate gene names: NA

Gene position: 168314-167022 (Counterclockwise)

Preceding gene: 118578606

Following gene: 118578604

Centisome position: 4.2

GC content: 57.54

Gene sequence:

>1293_bases
ATGTCGAGTGAAAGAGCTCTCATCTCTGCCCTCCAGGCTTATAACACATTTACCGTCACCTCAGCACCGTTCAGCGACTA
TGTCCACCTGATCCACCCCGGCGACTTTGGCTCGTGGCTGGGGATGCTGAACGCCGACCAAATCGGGGTACCCCCACGCG
CACCGCTCATGGGACTCACAGCCGAGGTATCAGGCGCAACGCTTCTCATCGGTGATGCCGACGGCGCCATCCTGGTCGAT
CCGGGCAGGTATACTCCAATGCCGCTCCAGAGTAGGCCCCCTCTGGCCATTGTGATCACCCACGCACACAGGGATCACTT
CGACGGCCTATCCGATGCTTTGCAAAGTTGGAAGGATGTCCCGGTCTACCTCAGTGAAATTACTCGCACGCTGCTGACGG
ACTCATTGCAGCGCGACAATGCCAACGCCCTGGCCAGGGAACTCTCGGAACGAGCGATACTCGTTGCTCCCGACGCCACT
CTCACCGTGGGGCGTTTCCGCATGACCGCCTACGATGCCGGACATTGCTTGGGAGCGACCGCCGTCCACCTAGAGGATGC
TGAGACTGGTCAGGGAATCTTGATAGCCGGCGAGTTCAGCCGAAGGAAAGTAGGCAGCGTCTGTCATAAAATTCCGCAGC
TCTCGGTCAATACCCTCTTCGTCGAGGCCATACACGCCGACGACCATCTGCCGACCGGCGTCAACGGTCAGAACAACGTT
GAGTTCACCTCCAAGCTTGATGCCGCCTATGCCCAAGGAAAGACCATCGTCATCGCTGCGGCGTCTCTGGCAGAGATGCA
GGAAGTCTACGCCATCTGCGCGCTCCATCAGCGGCGCGGCGGACTCCCGGAGTACCCTCTGTACGTCGGGAACCTCCGCC
CCGTGATGAAGAGCGCTTTGAAGCATCTCGAGAGAGTGGAACCGTGGGACCTCGATGTCACTTTCACTAACTCCATTCAG
GAAGAAGCCATAAATATCCTCACCTGCGCCTTCGAGGGACAAACGGACGACGGGCACTTCTCCAGTGCCTATGCGCAGGA
CTCGGCTAACGAAGATATTCTCTGGCTCTATCCCGAAAGGTATTCCGCTCTAAAGCCTGAAAAGGCAGCACTCTACCGCG
TATTTACCCATGCAAGCCTCTGTGAGATAGGAGAGATGGTCCTAGTTCAAAAGCCGGCAAATGTTTGCCTTTACTCCGGC
GGATGTCATGGCAGTGTGTTGGCGGGGTTCCTTGCGAGGTCAGGGTTTGCCCTTCACGATTTTTCGGGCGCGGCAGGCAG
TTTCCACTTTTGA

Upstream 100 bases:

>100_bases
GGCACGCCTACAGAGCAACTCTTTGCCGCCATAGCTGCCGAACGGTGCGGGGAGTCGGGGAGTCCCGACCGTTTCCTCGA
GGCTTGGGAGAACTTCATTG

Downstream 100 bases:

>100_bases
AAGCATCAAGACGAGGAGAATGTCAATGGGACCCTACAGCAAACACAAAAACGACAGGGAGCGAGGCAAACACTCGCCTT
CCCATTTCCCCGTCAAAGAC

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLTAEVSGATLLIGDADGAILVD
PGRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDVPVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDAT
LTVGRFRMTAYDAGHCLGATAVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNV
EFTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSALKHLERVEPWDLDVTFTNSIQ
EEAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPERYSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSG
GCHGSVLAGFLARSGFALHDFSGAAGSFHF

Sequences:

>Translated_430_residues
MSSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLTAEVSGATLLIGDADGAILVD
PGRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDVPVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDAT
LTVGRFRMTAYDAGHCLGATAVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNV
EFTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSALKHLERVEPWDLDVTFTNSIQ
EEAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPERYSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSG
GCHGSVLAGFLARSGFALHDFSGAAGSFHF
>Mature_429_residues
SSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLTAEVSGATLLIGDADGAILVDP
GRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDVPVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDATL
TVGRFRMTAYDAGHCLGATAVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNVE
FTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSALKHLERVEPWDLDVTFTNSIQE
EAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPERYSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSGG
CHGSVLAGFLARSGFALHDFSGAAGSFHF

Specific function: Unknown

COG id: COG1782

COG function: function code R; Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46551; Mature: 46420

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLT
CCCHHHHHHHHHHCCEEEEECCCHHCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEE
AEVSGATLLIGDADGAILVDPGRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDV
EECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCC
PVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDATLTVGRFRMTAYDAGHCLGAT
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEECCCCCCCCE
AVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNV
EEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
EFTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSAL
CHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHH
KHLERVEPWDLDVTFTNSIQEEAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPER
HHHHHCCCCCEEEEECCCHHHHHEEEEEEEECCCCCCCCCCHHHHCCCCCCCEEEECCCH
YSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSGGCHGSVLAGFLARSGFALHD
HCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHCCCEEEE
FSGAAGSFHF
CCCCCCCCCC
>Mature Secondary Structure 
SSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLT
CCHHHHHHHHHHCCEEEEECCCHHCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEE
AEVSGATLLIGDADGAILVDPGRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDV
EECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCC
PVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDATLTVGRFRMTAYDAGHCLGAT
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEECCCCCCCCE
AVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNV
EEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
EFTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSAL
CHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHH
KHLERVEPWDLDVTFTNSIQEEAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPER
HHHHHCCCCCEEEEECCCHHHHHEEEEEEEECCCCCCCCCCHHHHCCCCCCCEEEECCCH
YSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSGGCHGSVLAGFLARSGFALHD
HCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHCCCEEEE
FSGAAGSFHF
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA