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The map label for this gene is yifB [H]

Identifier: 118578596

GI number: 118578596

Start: 159234

End: 159662

Strand: Reverse

Name: yifB [H]

Synonym: Ppro_0152

Alternate gene names: 118578596

Gene position: 159662-159234 (Counterclockwise)

Preceding gene: 118578598

Following gene: 118578587

Centisome position: 3.98

GC content: 54.08

Gene sequence:

>429_bases
ATGCGTGAACTAATCCAATATCGCTCCCGCATCTCCGGCCCACTCATGGACCGGATCGACATCCACATCGAAGTTCCTGC
TGTAAAATACCGGGAGTTGGCAGAACAATCCGAAGGCGAGAGTTCAGCAGTTATTGCCAAGCGTGTCGAAGCGGCACGGG
GTATTCAGCTTGAACGTTTCAAGGGAACCAAGGTCCACTGCAACGCCCACATGAATCCCCGGCAGATACGAAAATTTTGT
GAACCCGATGCAGCTGGACACCGTTTGCTTGAGATGGTGACGGAGCGGCTCGGCTTCTCAGCCAGGGCTTATACCCGGAT
ACTGAAGGTTGCCCGCACGATTGCTGATCTTGAATACTCTGAATCTGTCAGGGAGCAGCATCTTGCCGAGGCGATCCAGT
ACAGGAGCCTGGACAGGAAGACGTCCTGA

Upstream 100 bases:

>100_bases
GAGAACGAGTGCCGTTTTGTATAAGAGTTGTAGAGAAAGGTTAACACACCTATGCAAGTGCTCCGGGAACCCAGCAAATT
CAGATAGTTGCACATGTACC

Downstream 100 bases:

>100_bases
CATATAGATTGCTTCCGGGAGCTACATCGCCTGCCAGATGAGCCAGGCTCCGGCAAGCGAGATTATGATGCCGCTTGCTT
TCCTGCTCCAGGCCGAAGCA

Product: Mg chelatase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRELIQYRSRISGPLMDRIDIHIEVPAVKYRELAEQSEGESSAVIAKRVEAARGIQLERFKGTKVHCNAHMNPRQIRKFC
EPDAAGHRLLEMVTERLGFSARAYTRILKVARTIADLEYSESVREQHLAEAIQYRSLDRKTS

Sequences:

>Translated_142_residues
MRELIQYRSRISGPLMDRIDIHIEVPAVKYRELAEQSEGESSAVIAKRVEAARGIQLERFKGTKVHCNAHMNPRQIRKFC
EPDAAGHRLLEMVTERLGFSARAYTRILKVARTIADLEYSESVREQHLAEAIQYRSLDRKTS
>Mature_142_residues
MRELIQYRSRISGPLMDRIDIHIEVPAVKYRELAEQSEGESSAVIAKRVEAARGIQLERFKGTKVHCNAHMNPRQIRKFC
EPDAAGHRLLEMVTERLGFSARAYTRILKVARTIADLEYSESVREQHLAEAIQYRSLDRKTS

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=138, Percent_Identity=40.5797101449275, Blast_Score=103, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568
- InterPro:   IPR002078 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 16366; Mature: 16366

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELIQYRSRISGPLMDRIDIHIEVPAVKYRELAEQSEGESSAVIAKRVEAARGIQLERF
CHHHHHHHHHCCCCCHHHEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEC
KGTKVHCNAHMNPRQIRKFCEPDAAGHRLLEMVTERLGFSARAYTRILKVARTIADLEYS
CCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ESVREQHLAEAIQYRSLDRKTS
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRELIQYRSRISGPLMDRIDIHIEVPAVKYRELAEQSEGESSAVIAKRVEAARGIQLERF
CHHHHHHHHHCCCCCHHHEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEC
KGTKVHCNAHMNPRQIRKFCEPDAAGHRLLEMVTERLGFSARAYTRILKVARTIADLEYS
CCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ESVREQHLAEAIQYRSLDRKTS
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]