| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118578587
Identifier: 118578587
GI number: 118578587
Start: 153218
End: 153556
Strand: Reverse
Name: 118578587
Synonym: Ppro_0143
Alternate gene names: NA
Gene position: 153556-153218 (Counterclockwise)
Preceding gene: 118578596
Following gene: 118578584
Centisome position: 3.83
GC content: 53.1
Gene sequence:
>339_bases ATGGCCTCTCCAGTTAACCGCACATATCTCCGTCAGACCCGGGATGCAGTTGAACTGTTGGGCAAGCTCATCCGGCTTGG CAGGAAAGAACGCAAGATGACCGAGGAAGAGCTGTCCGGACGGGCGGGGATTTCCAGAAGGACCTTGCAGAAGATCGAGC GTGGTGATCCGAAGTGTGAGATCGGTTTGGTGTTTGAGGTTGCCCACATCGTCGGGGTGAAACTTTTCAGCGATGAGGAA AATTCGATCCGCTACACTTTCGGCAGGCACATTGACGATAAGCTGGCCTTGCTGCCCAAGCGGGTTCGTAAGACAGTAAA GGTCAATGATGATTTCTGA
Upstream 100 bases:
>100_bases ACCGGTCGGATGTAAAGCGGTTGACGCAATTACCATAATTTGGATATTATCGTAAACAATAAATGCTGTTATGACTATGA TAATATCCTAGTGGTGATTT
Downstream 100 bases:
>100_bases CGGAAACTTTCTCTGCACGGAAGAAAGTATTCACTATTCATTCCTCTGACAGAAGGAAGGGGCCTGTCAATCTGATTGTG TAAATGACTTTTCGGTTTTC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator-Like Protein; Xin-Antitoxin System Antitoxin Component Xre Family
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MASPVNRTYLRQTRDAVELLGKLIRLGRKERKMTEEELSGRAGISRRTLQKIERGDPKCEIGLVFEVAHIVGVKLFSDEE NSIRYTFGRHIDDKLALLPKRVRKTVKVNDDF
Sequences:
>Translated_112_residues MASPVNRTYLRQTRDAVELLGKLIRLGRKERKMTEEELSGRAGISRRTLQKIERGDPKCEIGLVFEVAHIVGVKLFSDEE NSIRYTFGRHIDDKLALLPKRVRKTVKVNDDF >Mature_111_residues ASPVNRTYLRQTRDAVELLGKLIRLGRKERKMTEEELSGRAGISRRTLQKIERGDPKCEIGLVFEVAHIVGVKLFSDEEN SIRYTFGRHIDDKLALLPKRVRKTVKVNDDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12924; Mature: 12793
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPVNRTYLRQTRDAVELLGKLIRLGRKERKMTEEELSGRAGISRRTLQKIERGDPKCE CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC IGLVFEVAHIVGVKLFSDEENSIRYTFGRHIDDKLALLPKRVRKTVKVNDDF HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ASPVNRTYLRQTRDAVELLGKLIRLGRKERKMTEEELSGRAGISRRTLQKIERGDPKCE CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC IGLVFEVAHIVGVKLFSDEENSIRYTFGRHIDDKLALLPKRVRKTVKVNDDF HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA