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The map label for this gene is 118578502

Identifier: 118578502

GI number: 118578502

Start: 62017

End: 62700

Strand: Direct

Name: 118578502

Synonym: Ppro_0054

Alternate gene names: NA

Gene position: 62017-62700 (Clockwise)

Preceding gene: 118578501

Following gene: 118578503

Centisome position: 1.55

GC content: 62.28

Gene sequence:

>684_bases
ATGAACCACAGCGAAACCGACTTTCAGGGCGGAATCGAGCATTACAAGCTGGGACTGTTGCCCCAGGCAAAGACGCTGCT
GAAGAGCTGCGTCACCCGGGACCCGCGTCATGCCGAGGCCCACAACCTGCTGGGGATCGTCTGCTATCAGCGGGAGGAGT
TCGGCGAGTCCCTGGCTTGGCTGCGGCGCGCCATCGCCCTGCGGCCCCACGAACCCAACTACTGCAACAACGCCGGGGTG
ACGGCCCATGCCCTGCGGCTCTACGAAGAGGCGCGCACCTTTTTCCTGCAAGCCATGGAGCTGAGCCCTGATTATCACGA
TCCCTACAACAACCTGGGCAATCTGCTGCGGGACCTGTTCCGTTTTGATGAGGCGGTCCTGCATTTCAAACAGGCCCTGG
CTCTGAAGCCTGATTTCAGCGAGGCCTGCTTCAACCTGGCCATGACCCTGGAACAGAAGGGTCACACCATTGAGGCGATC
TTCTACCTGCAACAGACCGTGAAGATGGCGCCGGACCACCTCCAGGCCCACCAGCATCTGGCCCGGCTGCTGCCGAAGCA
GCGGCGCGGCGACGAGGCCGGCGACCACGCCCGCCAGGCCGTATACCTGCAACCGCGTCAGAAAGTCTTCTTCAAAGACA
CCCCGGTGTGGTTGGCCCCGGACTATCGGGGGCTGTTATCGTGA

Upstream 100 bases:

>100_bases
CAACCCGGGACACCGCAGGCAAGTCAAGCCCTGGCGGCGAGTCCGGCATTACAACCGGACTATCTTAATCATTCTGGCAA
GAAGGCCTTTAACAGTCATT

Downstream 100 bases:

>100_bases
GGATTGCGGTTCTGTGCAGCGGCAGCGTACTGCAACCGGTTCTGGAGGCGCTCTACAGCCAGGGGTTGCTGGCCGGCGTG
GCCGTGCCAGCGGCACCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Tetratricopeptide TPR_1 Repeat-Containing Protein; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Repeat Domain Protein; TPR Repeat Protein; TPR Domain Protein; Methyltransferase Type; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; TPR Repeat; Tetratricopeptide Repeat-Containing Protein; Glycosyl Transferase Family Protein; O-GlcNAc Transferase; Porphyrin Biosynthesis Protein; Sulfotransferase; Type IV Pilus Biogenesis/Stability Protein PilW; Peptidase S1 And S6 Chymotrypsin/Hap; Protein Prenyltransferase Subunit Alpha; Flp Pilus Assembly Protein TadD; Tetratricopeptide Repeat Domain-Containing Protein; Protein With TPR Motifs; Tetratricopeptide Domain-Containing Protein; TPR Domain/Sulfotransferase Domain Protein; TPR Repeat-Containing Methyltransferase; Peptidase; O-Linked GlcNAc Transferase

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNHSETDFQGGIEHYKLGLLPQAKTLLKSCVTRDPRHAEAHNLLGIVCYQREEFGESLAWLRRAIALRPHEPNYCNNAGV
TAHALRLYEEARTFFLQAMELSPDYHDPYNNLGNLLRDLFRFDEAVLHFKQALALKPDFSEACFNLAMTLEQKGHTIEAI
FYLQQTVKMAPDHLQAHQHLARLLPKQRRGDEAGDHARQAVYLQPRQKVFFKDTPVWLAPDYRGLLS

Sequences:

>Translated_227_residues
MNHSETDFQGGIEHYKLGLLPQAKTLLKSCVTRDPRHAEAHNLLGIVCYQREEFGESLAWLRRAIALRPHEPNYCNNAGV
TAHALRLYEEARTFFLQAMELSPDYHDPYNNLGNLLRDLFRFDEAVLHFKQALALKPDFSEACFNLAMTLEQKGHTIEAI
FYLQQTVKMAPDHLQAHQHLARLLPKQRRGDEAGDHARQAVYLQPRQKVFFKDTPVWLAPDYRGLLS
>Mature_227_residues
MNHSETDFQGGIEHYKLGLLPQAKTLLKSCVTRDPRHAEAHNLLGIVCYQREEFGESLAWLRRAIALRPHEPNYCNNAGV
TAHALRLYEEARTFFLQAMELSPDYHDPYNNLGNLLRDLFRFDEAVLHFKQALALKPDFSEACFNLAMTLEQKGHTIEAI
FYLQQTVKMAPDHLQAHQHLARLLPKQRRGDEAGDHARQAVYLQPRQKVFFKDTPVWLAPDYRGLLS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=180, Percent_Identity=28.3333333333333, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI32307150, Length=180, Percent_Identity=28.3333333333333, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI118766330, Length=189, Percent_Identity=25.3968253968254, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI118766328, Length=189, Percent_Identity=25.3968253968254, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=204, Percent_Identity=25.4901960784314, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115532692, Length=203, Percent_Identity=25.615763546798, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17647755, Length=197, Percent_Identity=28.4263959390863, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24585827, Length=197, Percent_Identity=28.4263959390863, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24585829, Length=197, Percent_Identity=28.4263959390863, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26176; Mature: 26176

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHSETDFQGGIEHYKLGLLPQAKTLLKSCVTRDPRHAEAHNLLGIVCYQREEFGESLAW
CCCCCCCHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEEECHHHHHHHHHH
LRRAIALRPHEPNYCNNAGVTAHALRLYEEARTFFLQAMELSPDYHDPYNNLGNLLRDLF
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RFDEAVLHFKQALALKPDFSEACFNLAMTLEQKGHTIEAIFYLQQTVKMAPDHLQAHQHL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHH
ARLLPKQRRGDEAGDHARQAVYLQPRQKVFFKDTPVWLAPDYRGLLS
HHHCCHHHCCCCCHHHHHHEEEECCCCCEEECCCCEEECCCHHHHCC
>Mature Secondary Structure
MNHSETDFQGGIEHYKLGLLPQAKTLLKSCVTRDPRHAEAHNLLGIVCYQREEFGESLAW
CCCCCCCHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEEECHHHHHHHHHH
LRRAIALRPHEPNYCNNAGVTAHALRLYEEARTFFLQAMELSPDYHDPYNNLGNLLRDLF
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RFDEAVLHFKQALALKPDFSEACFNLAMTLEQKGHTIEAIFYLQQTVKMAPDHLQAHQHL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHH
ARLLPKQRRGDEAGDHARQAVYLQPRQKVFFKDTPVWLAPDYRGLLS
HHHCCHHHCCCCCHHHHHHEEEECCCCCEEECCCCEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA