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The map label for this gene is splB [H]

Identifier: 118479393

GI number: 118479393

Start: 4022805

End: 4023998

Strand: Reverse

Name: splB [H]

Synonym: BALH_3810

Alternate gene names: 118479393

Gene position: 4023998-4022805 (Counterclockwise)

Preceding gene: 118479396

Following gene: 118479392

Centisome position: 76.54

GC content: 37.94

Gene sequence:

>1194_bases
TTGGCTGTGCATGATTTCACCACCTTTTACTCAGGTAACTTGCTGTGCAAGGTAGCTGTTATCCAAATTATAACATTCAG
TAACTTGCAACGCAAGTTACTGAAGTGGAAAACTTTAATGCGTGTTAATTTTTCAACGTTTCCCATACTAACGAGAGGAG
GGAAGCATATGAAACCGTTTATGCCAAAACTTGTTTACTTTGAACCGAAGGCCCTTGAATATCCACTTGGAAAAGAGCTG
TATGAGAAGTTTACGAAGATGGGATTAGAAATTCGTGAAACGACATCCCATAATCAAATTCGAAATTTGCCGGGTGAAAA
TGATTTGCAAAAGTATCGTAATGCAAAAGCAACGCTTGTCGTTGGGGTGAGGAAGACATTAAAGTTTGATACGTCAAAAC
CGTCAGCTGAATATGCAATTCCGCTTGCAACAGGATGTATGGGACATTGTCATTATTGTTACTTGCAAACGACACTTGGG
AGTAAGCCTTACGTTCGCGTGTATGTGAATCTTGATGAAATATTTGAGAAGGCACAGCAATATATGGATGAAAGAGCACC
TGAAATAACAAGGTTTGAAGCTGCTTGTACATCAGATATCGTTGGGATTGATCATTTAACACATGCATTAAAGCGCGCGA
TCGAATTCATTGGAGAAAGTGAGCATGGGCGTTTACGTTTCGTTACGAAATATTCGCACGTTGATCATTTATTAGATGCA
AAACATAACGGGAAAACTCGTTTCAGGTTTAGTATTAATTCACGTTATGTAATTAAAAATTTTGAACCAGGGACATCACC
GTTTGAAGAAAGAATTGAAGCGGCTCGTAAAGTAGCAGGCGCGGGTTATCCACTTGGATTTATAGTGGCGCCGCTTTATA
TGCATGAAGGATGGGAAGAAGGATATCGTGAACTATTTGAGCGATTGTACAATGCATTAAACGATTTGTCGATACCGAAT
TTAACATTTGAATTAATTCAACATCGCTTTACAAAGCCAGCAAAAAAGGTTATTCAAGAGCGTTATCCGAATACGAAGCT
TGAAATGGATGAAGAGAAGCGTAAATATAAATGGGGACGATATGGCATTGGAAAATACGTATATAAAAAAGATGATGCGG
AAGTATTGGAAGAAACGATAAGAGGTTATATATATGAGTTTTTTCCTGATGCAGAAATACAATACTTTACTTAA

Upstream 100 bases:

>100_bases
TAAATCCGTGTTTATTTAATTTTGTACTCAGTTCATATCCGTACACTTCTTCTTGTGAAATGATGTACAGGATACAACCT
TCGAGTACACCTTTTAACAT

Downstream 100 bases:

>100_bases
GAGGAGTCTGTATGCAAATACAGATTCTTTTTTGTTTTATATATTTAGGCTTGTTTTCAACTTGTCACGTTATTCTTTCT
GGTGTATCATTTTATTGATT

Product: spore photoproduct lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MAVHDFTTFYSGNLLCKVAVIQIITFSNLQRKLLKWKTLMRVNFSTFPILTRGGKHMKPFMPKLVYFEPKALEYPLGKEL
YEKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAKATLVVGVRKTLKFDTSKPSAEYAIPLATGCMGHCHYCYLQTTLG
SKPYVRVYVNLDEIFEKAQQYMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEFIGESEHGRLRFVTKYSHVDHLLDA
KHNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHEGWEEGYRELFERLYNALNDLSIPN
LTFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKYKWGRYGIGKYVYKKDDAEVLEETIRGYIYEFFPDAEIQYFT

Sequences:

>Translated_397_residues
MAVHDFTTFYSGNLLCKVAVIQIITFSNLQRKLLKWKTLMRVNFSTFPILTRGGKHMKPFMPKLVYFEPKALEYPLGKEL
YEKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAKATLVVGVRKTLKFDTSKPSAEYAIPLATGCMGHCHYCYLQTTLG
SKPYVRVYVNLDEIFEKAQQYMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEFIGESEHGRLRFVTKYSHVDHLLDA
KHNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHEGWEEGYRELFERLYNALNDLSIPN
LTFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKYKWGRYGIGKYVYKKDDAEVLEETIRGYIYEFFPDAEIQYFT
>Mature_396_residues
AVHDFTTFYSGNLLCKVAVIQIITFSNLQRKLLKWKTLMRVNFSTFPILTRGGKHMKPFMPKLVYFEPKALEYPLGKELY
EKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAKATLVVGVRKTLKFDTSKPSAEYAIPLATGCMGHCHYCYLQTTLGS
KPYVRVYVNLDEIFEKAQQYMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEFIGESEHGRLRFVTKYSHVDHLLDAK
HNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHEGWEEGYRELFERLYNALNDLSIPNL
TFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKYKWGRYGIGKYVYKKDDAEVLEETIRGYIYEFFPDAEIQYFT

Specific function: Involved in repair of UV radiation-induced DNA damage during spore germination. Can repair thymine dimer 5-thyminyl-5,6- dihydrothymine (known as spore photoproduct (SP)) by in situ monomerization of SP to two thymines [H]

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. SPL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004594 [H]

Pfam domain/function: NA

EC number: =4.1.99.14 [H]

Molecular weight: Translated: 46384; Mature: 46253

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVHDFTTFYSGNLLCKVAVIQIITFSNLQRKLLKWKTLMRVNFSTFPILTRGGKHMKPF
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
MPKLVYFEPKALEYPLGKELYEKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAKATLV
CCHHEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHCCCCCHHHHHHCCCCEEEE
VGVRKTLKFDTSKPSAEYAIPLATGCMGHCHYCYLQTTLGSKPYVRVYVNLDEIFEKAQQ
EEEHHHHEECCCCCCCCEEEEHHHCCCCCCEEEEEEECCCCCCEEEEEECHHHHHHHHHH
YMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEFIGESEHGRLRFVTKYSHVDHLLDA
HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHCC
KHNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHEGWEE
CCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHH
GYRELFERLYNALNDLSIPNLTFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKYKWGR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHCCCC
YGIGKYVYKKDDAEVLEETIRGYIYEFFPDAEIQYFT
CCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEECC
>Mature Secondary Structure 
AVHDFTTFYSGNLLCKVAVIQIITFSNLQRKLLKWKTLMRVNFSTFPILTRGGKHMKPF
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
MPKLVYFEPKALEYPLGKELYEKFTKMGLEIRETTSHNQIRNLPGENDLQKYRNAKATLV
CCHHEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHCCCCCHHHHHHCCCCEEEE
VGVRKTLKFDTSKPSAEYAIPLATGCMGHCHYCYLQTTLGSKPYVRVYVNLDEIFEKAQQ
EEEHHHHEECCCCCCCCEEEEHHHCCCCCCEEEEEEECCCCCCEEEEEECHHHHHHHHHH
YMDERAPEITRFEAACTSDIVGIDHLTHALKRAIEFIGESEHGRLRFVTKYSHVDHLLDA
HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHCC
KHNGKTRFRFSINSRYVIKNFEPGTSPFEERIEAARKVAGAGYPLGFIVAPLYMHEGWEE
CCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHH
GYRELFERLYNALNDLSIPNLTFELIQHRFTKPAKKVIQERYPNTKLEMDEEKRKYKWGR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHCCCC
YGIGKYVYKKDDAEVLEETIRGYIYEFFPDAEIQYFT
CCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA