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The map label for this gene is oppA [H]

Identifier: 118478827

GI number: 118478827

Start: 3415910

End: 3417688

Strand: Reverse

Name: oppA [H]

Synonym: BALH_3222

Alternate gene names: 118478827

Gene position: 3417688-3415910 (Counterclockwise)

Preceding gene: 118478828

Following gene: 118478826

Centisome position: 65.01

GC content: 35.02

Gene sequence:

>1779_bases
ATGATAATAAGTAAGAATTTTCTAATAATTAGAGAGAAATCTCTCAAAGTTAATATCGTACATATAATTGGGGAGGGTAC
AAAAATGAAGAGAAAAAAGATGAAAAAATTAACAGCGGTTGTAGCACCGGTTTTAGTAATGAGTATGGCATTAACAGCTT
GCTCTGGATCTGGGGAAAAAGATAAAGCAAGCACAACACCAAAAAGCGGTGAAAAAGAAGGCGGAAAACTAGCAGCGAAG
CAAGTGCTTAATTTAACAGAGTCTCAAGAGATTCCATCTATGGACTCTGCTAAAGCGACAGACCAAGTATCGTTTCTCGC
TTTAAACAACGTAATGGAAGGTTTATATCGACTTGATAAAGATAATAAAGCGACACCAGGAGTTGCTGAGTCATATAAAA
AGAGTGATGATGGTAAAAAATACACATTTACATTAAATAAAAATGCAAAATGGTCAAATGGAGAGCCTGTAACAGCGAAA
GATTTCGTGTTTGCTTGGAAACGTGCGGTAGATAAAAATACAGCAGCAGAATATGCATACATTATGTTTGATTTGAAAAA
TGCACAAGCGATTAATGAAGGAAAAGCTGAACTAGATACGTTAGGAGTAAAAGCTGTAGATGACTATACGTTAGAAGTAG
AATTAGAAAATCCAGTTCCTTACTTTGTAGAATTAACTTCATTTGGAACATTTTATCCATTAAACGAGAAATTTGTAAAA
GAAAAAGGAGAAAAGTACGGTTTAGAATCAGATACGACGTTATACAACGGACCGTTTACATTAACAGACTGGCAACATGA
AGAAGGTTGGAAGTTAAAGAAAAATGCACAATATTGGGATAATAAGACAGTTAAGTTGGAAGAAATTAATTTTAACGTAG
TAAAAGATAGCGGTACACGTGTTAACTTATATGAAAGTGGACAAATTGATCGTTCAGGACTTACATCTGAATTTGTTGAC
AAATATAAATCAAGCCCCGACTTCTTTACACAAAAAACACCGTCAACGTACTTCTTACGCTTAAACCAAAAACGTGGTGG
GCAAGATACAGTGTTAAAGAGCAAAGATTTACGTTTAGCGATTGCAAAAGCGTACGATAAAAAAGGCTTAACGAATGTAA
TTTTAAATGATGGTTCTACACCTGCGGATTACTTAGTACCAAAAGAATTTGCTAAGAGCCCAGATGGAAAAGACTTCCGT
AAAGAAAATGGAGATATTTTAAAAACAGATGTAAAAAAAGCAAAAGAGCATTGGGAAAAAGCGAAAAAAGAACTTGGAAA
AGATGCAATTACAGTGGAACTATTAAACTATGATGGGGATGGTGCGAAAAAAGTAGGAGAATTCTTAAAAGGAGAACTTG
AGAAAAACTTGCCAGGTTTAACAGTGAATTTGAAAAACCAGCCATTTAAACAAAAGTTAAAATTAGAATCAGATCTAGAT
TATGATTTATCTTACGCTGGTTGGGGCCCTGACTACTTAGATCCAATGACATTCATTGATATGTTCGTTACAAATGGCCC
TCATAACCAAACAGGATATTCAAATCCTAAATATGATGAAATTGTACAAAAAGGTAAAGGCGAGCTATTAACGAAAACGA
AAGAGCGTTGGGATAGCTTACTGAAAGCGGAGAAAATGTTACTGGAAGATGCGGCAATTGCACCATTATATCAACGTGGT
GATGCTATCGTTCAAAGACCTAAAGTAAAAGGTATTGTTCACCATCCAGTTGGTGGAGACTACAGCTATAAATGGGCATA
TATTACAGAGGATAAGTAA

Upstream 100 bases:

>100_bases
AGATGTGGGAGAATTCGTATAGTAATAGTTATTGCGGTTGTTAAGTTAATTATTCAGAATATTCATAAAAACACTTTACA
AATCCAGAGAAATTAGTAGA

Downstream 100 bases:

>100_bases
GATGGGGGGGCGTACAATACGCCCCTTTTTCTATGCACTTTTCTTCCGTCTTCGAATATATAAAATAAAAAAGGGAGAAT
CCCATGAAACGAAACACATA

Product: oligopeptide transporter, periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MIISKNFLIIREKSLKVNIVHIIGEGTKMKRKKMKKLTAVVAPVLVMSMALTACSGSGEKDKASTTPKSGEKEGGKLAAK
QVLNLTESQEIPSMDSAKATDQVSFLALNNVMEGLYRLDKDNKATPGVAESYKKSDDGKKYTFTLNKNAKWSNGEPVTAK
DFVFAWKRAVDKNTAAEYAYIMFDLKNAQAINEGKAELDTLGVKAVDDYTLEVELENPVPYFVELTSFGTFYPLNEKFVK
EKGEKYGLESDTTLYNGPFTLTDWQHEEGWKLKKNAQYWDNKTVKLEEINFNVVKDSGTRVNLYESGQIDRSGLTSEFVD
KYKSSPDFFTQKTPSTYFLRLNQKRGGQDTVLKSKDLRLAIAKAYDKKGLTNVILNDGSTPADYLVPKEFAKSPDGKDFR
KENGDILKTDVKKAKEHWEKAKKELGKDAITVELLNYDGDGAKKVGEFLKGELEKNLPGLTVNLKNQPFKQKLKLESDLD
YDLSYAGWGPDYLDPMTFIDMFVTNGPHNQTGYSNPKYDEIVQKGKGELLTKTKERWDSLLKAEKMLLEDAAIAPLYQRG
DAIVQRPKVKGIVHHPVGGDYSYKWAYITEDK

Sequences:

>Translated_592_residues
MIISKNFLIIREKSLKVNIVHIIGEGTKMKRKKMKKLTAVVAPVLVMSMALTACSGSGEKDKASTTPKSGEKEGGKLAAK
QVLNLTESQEIPSMDSAKATDQVSFLALNNVMEGLYRLDKDNKATPGVAESYKKSDDGKKYTFTLNKNAKWSNGEPVTAK
DFVFAWKRAVDKNTAAEYAYIMFDLKNAQAINEGKAELDTLGVKAVDDYTLEVELENPVPYFVELTSFGTFYPLNEKFVK
EKGEKYGLESDTTLYNGPFTLTDWQHEEGWKLKKNAQYWDNKTVKLEEINFNVVKDSGTRVNLYESGQIDRSGLTSEFVD
KYKSSPDFFTQKTPSTYFLRLNQKRGGQDTVLKSKDLRLAIAKAYDKKGLTNVILNDGSTPADYLVPKEFAKSPDGKDFR
KENGDILKTDVKKAKEHWEKAKKELGKDAITVELLNYDGDGAKKVGEFLKGELEKNLPGLTVNLKNQPFKQKLKLESDLD
YDLSYAGWGPDYLDPMTFIDMFVTNGPHNQTGYSNPKYDEIVQKGKGELLTKTKERWDSLLKAEKMLLEDAAIAPLYQRG
DAIVQRPKVKGIVHHPVGGDYSYKWAYITEDK
>Mature_592_residues
MIISKNFLIIREKSLKVNIVHIIGEGTKMKRKKMKKLTAVVAPVLVMSMALTACSGSGEKDKASTTPKSGEKEGGKLAAK
QVLNLTESQEIPSMDSAKATDQVSFLALNNVMEGLYRLDKDNKATPGVAESYKKSDDGKKYTFTLNKNAKWSNGEPVTAK
DFVFAWKRAVDKNTAAEYAYIMFDLKNAQAINEGKAELDTLGVKAVDDYTLEVELENPVPYFVELTSFGTFYPLNEKFVK
EKGEKYGLESDTTLYNGPFTLTDWQHEEGWKLKKNAQYWDNKTVKLEEINFNVVKDSGTRVNLYESGQIDRSGLTSEFVD
KYKSSPDFFTQKTPSTYFLRLNQKRGGQDTVLKSKDLRLAIAKAYDKKGLTNVILNDGSTPADYLVPKEFAKSPDGKDFR
KENGDILKTDVKKAKEHWEKAKKELGKDAITVELLNYDGDGAKKVGEFLKGELEKNLPGLTVNLKNQPFKQKLKLESDLD
YDLSYAGWGPDYLDPMTFIDMFVTNGPHNQTGYSNPKYDEIVQKGKGELLTKTKERWDSLLKAEKMLLEDAAIAPLYQRG
DAIVQRPKVKGIVHHPVGGDYSYKWAYITEDK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=545, Percent_Identity=29.9082568807339, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI1787495, Length=510, Percent_Identity=32.5490196078431, Blast_Score=218, Evalue=8e-58,
Organism=Escherichia coli, GI1789397, Length=547, Percent_Identity=26.8738574040219, Blast_Score=189, Evalue=5e-49,
Organism=Escherichia coli, GI1787762, Length=478, Percent_Identity=25.1046025104602, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1789887, Length=515, Percent_Identity=22.5242718446602, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1787052, Length=319, Percent_Identity=24.7648902821317, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 66597; Mature: 66597

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISKNFLIIREKSLKVNIVHIIGEGTKMKRKKMKKLTAVVAPVLVMSMALTACSGSGEK
CEEECCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DKASTTPKSGEKEGGKLAAKQVLNLTESQEIPSMDSAKATDQVSFLALNNVMEGLYRLDK
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DNKATPGVAESYKKSDDGKKYTFTLNKNAKWSNGEPVTAKDFVFAWKRAVDKNTAAEYAY
CCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE
IMFDLKNAQAINEGKAELDTLGVKAVDDYTLEVELENPVPYFVELTSFGTFYPLNEKFVK
EEEECCCCCHHHCCCHHHHHCCCEEECCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHH
EKGEKYGLESDTTLYNGPFTLTDWQHEEGWKLKKNAQYWDNKTVKLEEINFNVVKDSGTR
HCHHHCCCCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCE
VNLYESGQIDRSGLTSEFVDKYKSSPDFFTQKTPSTYFLRLNQKRGGQDTVLKSKDLRLA
EEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEE
IAKAYDKKGLTNVILNDGSTPADYLVPKEFAKSPDGKDFRKENGDILKTDVKKAKEHWEK
EEHHHCCCCCCEEEECCCCCCHHHCCCHHHHCCCCCCCHHHCCCCEEHHHHHHHHHHHHH
AKKELGKDAITVELLNYDGDGAKKVGEFLKGELEKNLPGLTVNLKNQPFKQKLKLESDLD
HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCC
YDLSYAGWGPDYLDPMTFIDMFVTNGPHNQTGYSNPKYDEIVQKGKGELLTKTKERWDSL
CCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHH
LKAEKMLLEDAAIAPLYQRGDAIVQRPKVKGIVHHPVGGDYSYKWAYITEDK
HHHHHHHHHHHHHCHHHHCCCHHHCCCCCCCEEECCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MIISKNFLIIREKSLKVNIVHIIGEGTKMKRKKMKKLTAVVAPVLVMSMALTACSGSGEK
CEEECCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DKASTTPKSGEKEGGKLAAKQVLNLTESQEIPSMDSAKATDQVSFLALNNVMEGLYRLDK
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DNKATPGVAESYKKSDDGKKYTFTLNKNAKWSNGEPVTAKDFVFAWKRAVDKNTAAEYAY
CCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE
IMFDLKNAQAINEGKAELDTLGVKAVDDYTLEVELENPVPYFVELTSFGTFYPLNEKFVK
EEEECCCCCHHHCCCHHHHHCCCEEECCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHH
EKGEKYGLESDTTLYNGPFTLTDWQHEEGWKLKKNAQYWDNKTVKLEEINFNVVKDSGTR
HCHHHCCCCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCE
VNLYESGQIDRSGLTSEFVDKYKSSPDFFTQKTPSTYFLRLNQKRGGQDTVLKSKDLRLA
EEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEE
IAKAYDKKGLTNVILNDGSTPADYLVPKEFAKSPDGKDFRKENGDILKTDVKKAKEHWEK
EEHHHCCCCCCEEEECCCCCCHHHCCCHHHHCCCCCCCHHHCCCCEEHHHHHHHHHHHHH
AKKELGKDAITVELLNYDGDGAKKVGEFLKGELEKNLPGLTVNLKNQPFKQKLKLESDLD
HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCC
YDLSYAGWGPDYLDPMTFIDMFVTNGPHNQTGYSNPKYDEIVQKGKGELLTKTKERWDSL
CCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHH
LKAEKMLLEDAAIAPLYQRGDAIVQRPKVKGIVHHPVGGDYSYKWAYITEDK
HHHHHHHHHHHHHCHHHHCCCHHHCCCCCCCEEECCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]