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The map label for this gene is yybA [H]

Identifier: 118478529

GI number: 118478529

Start: 3078455

End: 3078907

Strand: Direct

Name: yybA [H]

Synonym: BALH_2905

Alternate gene names: 118478529

Gene position: 3078455-3078907 (Clockwise)

Preceding gene: 118478525

Following gene: 118478530

Centisome position: 58.56

GC content: 30.91

Gene sequence:

>453_bases
ATGAAAGAAATTCTTCGTGAAATTGGCATGATTGCAAGGGCATTAGATTCTATTAGTAATATAGAATTTAAAGAATATGA
GCTTACAAAAGGTCAGTATTTGTACCTTGTGCGAATATGTGAAAACCCAGGAATCATTCAAGAAAAGCTATCTGAGATGA
TAAAAGTAGATCGTACAACTGCAGCCCGGGCTATCAAAAAGCTTGAAATCAATGGATTTATCGAAAAGAAAGAAGATGAA
TCTAACAAAAAAATTAAAAAACTTTTCCCGACAGAAAAAGGAAAAAATGTTTATCCTTTCATTAAGAGAGAAAATGATTA
TTCCAATACTGTTGCATTAGAGGGATTTTCGGAAACAGAAGAGGAAACTATTTCTAACCTTCTTCAAAGAGTAAGAAAAA
ATATAGAAAAAGATTGGGAATTTGTAAAAAAGGGAAATAAGAGAGATTATTGA

Upstream 100 bases:

>100_bases
TCATCGTTATTTTTGTTGCATTTACAATAAAAATATTTTATATTAAATGTAACTTCAAATTGTTGCATTTGCAATAAAAA
TAAAAGATAAGGAGTTCATT

Downstream 100 bases:

>100_bases
TTATATAAAGGAGCGAACTATTAATATGACTACACATATAGAAAAGTGCACCCTTGAAGATATACACAAACTTCAAGAAA
TTAGTTATGAAACATTTAAT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKEILREIGMIARALDSISNIEFKEYELTKGQYLYLVRICENPGIIQEKLSEMIKVDRTTAARAIKKLEINGFIEKKEDE
SNKKIKKLFPTEKGKNVYPFIKRENDYSNTVALEGFSETEEETISNLLQRVRKNIEKDWEFVKKGNKRDY

Sequences:

>Translated_150_residues
MKEILREIGMIARALDSISNIEFKEYELTKGQYLYLVRICENPGIIQEKLSEMIKVDRTTAARAIKKLEINGFIEKKEDE
SNKKIKKLFPTEKGKNVYPFIKRENDYSNTVALEGFSETEEETISNLLQRVRKNIEKDWEFVKKGNKRDY
>Mature_150_residues
MKEILREIGMIARALDSISNIEFKEYELTKGQYLYLVRICENPGIIQEKLSEMIKVDRTTAARAIKKLEINGFIEKKEDE
SNKKIKKLFPTEKGKNVYPFIKRENDYSNTVALEGFSETEEETISNLLQRVRKNIEKDWEFVKKGNKRDY

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17673; Mature: 17673

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEILREIGMIARALDSISNIEFKEYELTKGQYLYLVRICENPGIIQEKLSEMIKVDRTT
CHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH
AARAIKKLEINGFIEKKEDESNKKIKKLFPTEKGKNVYPFIKRENDYSNTVALEGFSETE
HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEECCCCCCH
EETISNLLQRVRKNIEKDWEFVKKGNKRDY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKEILREIGMIARALDSISNIEFKEYELTKGQYLYLVRICENPGIIQEKLSEMIKVDRTT
CHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH
AARAIKKLEINGFIEKKEDESNKKIKKLFPTEKGKNVYPFIKRENDYSNTVALEGFSETE
HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEECCCCCCH
EETISNLLQRVRKNIEKDWEFVKKGNKRDY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]