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The map label for this gene is ypaA [H]

Identifier: 118478493

GI number: 118478493

Start: 3036358

End: 3036729

Strand: Reverse

Name: ypaA [H]

Synonym: BALH_2866

Alternate gene names: 118478493

Gene position: 3036729-3036358 (Counterclockwise)

Preceding gene: 118478494

Following gene: 118478490

Centisome position: 57.76

GC content: 34.14

Gene sequence:

>372_bases
ATGGAAATAATCGCAGCTATTTTAGTCGGGATTGTAGCATTAGAACATTTGTTTATCATGATCCTCGAAATGTTTTTTAT
TAATTCAAAAGTAGCGAAACGTGCTTTCAAATTACCGAAGCATTTAGAAGGAGATCGAAACGTAGCTGTTATGTTTGCAA
ACCAAGGGTTATATAATGGATTTTTAGCTGCTGGTCTCATTTGGGGACTTATAATTGGGTTTAACCCAATTGGTTATATG
GTGCAATTATTTTTCGTGATTTGTGTGGTGATTGCAGCTATTTTTGGAGGTTTCACATCTAATAAATCAATTATTATGAA
ACAAGGACTTCCAGCTATTTTAGCATTGGTTGCTCTATTAACTGTGATGTAG

Upstream 100 bases:

>100_bases
ATCGATAAAGCAGCCGACGAAGGGAATCGTTTCTTAGTTGATAGAATTCACAATGGAAATAATATAGAACGGATATTACG
GAGAGAGGGGGTAGAATGGT

Downstream 100 bases:

>100_bases
AAACGAAGATTTTCAATAAAAATTTCATTGCTACTGGTTAAAAACAAGGGCCGGAATTCCGGCTCCTTTTCTATACTAAA
GTCTTACTTTACCTCTCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MEIIAAILVGIVALEHLFIMILEMFFINSKVAKRAFKLPKHLEGDRNVAVMFANQGLYNGFLAAGLIWGLIIGFNPIGYM
VQLFFVICVVIAAIFGGFTSNKSIIMKQGLPAILALVALLTVM

Sequences:

>Translated_123_residues
MEIIAAILVGIVALEHLFIMILEMFFINSKVAKRAFKLPKHLEGDRNVAVMFANQGLYNGFLAAGLIWGLIIGFNPIGYM
VQLFFVICVVIAAIFGGFTSNKSIIMKQGLPAILALVALLTVM
>Mature_123_residues
MEIIAAILVGIVALEHLFIMILEMFFINSKVAKRAFKLPKHLEGDRNVAVMFANQGLYNGFLAAGLIWGLIIGFNPIGYM
VQLFFVICVVIAAIFGGFTSNKSIIMKQGLPAILALVALLTVM

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 13430; Mature: 13430

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIAAILVGIVALEHLFIMILEMFFINSKVAKRAFKLPKHLEGDRNVAVMFANQGLYNG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEECCCHHHH
FLAAGLIWGLIIGFNPIGYMVQLFFVICVVIAAIFGGFTSNKSIIMKQGLPAILALVALL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHH
TVM
HCC
>Mature Secondary Structure
MEIIAAILVGIVALEHLFIMILEMFFINSKVAKRAFKLPKHLEGDRNVAVMFANQGLYNG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEECCCHHHH
FLAAGLIWGLIIGFNPIGYMVQLFFVICVVIAAIFGGFTSNKSIIMKQGLPAILALVALL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHH
TVM
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]