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The map label for this gene is yjhR [C]

Identifier: 118478490

GI number: 118478490

Start: 3033456

End: 3035765

Strand: Reverse

Name: yjhR [C]

Synonym: BALH_2863

Alternate gene names: 118478490

Gene position: 3035765-3033456 (Counterclockwise)

Preceding gene: 118478493

Following gene: 118478489

Centisome position: 57.75

GC content: 38.1

Gene sequence:

>2310_bases
ATGTTTGGGGAGAAGGAAGGAGATTATACGATGAATACACCTACTCAAACTCCTTCATTATCGGAAACGATGAAAGAGTG
GCATTATGCATTAGCATATGAAATTAAACATTGGAAAACGATAGGCGGTAGTAAAATTTCTATCATGAACGGTCGTTTTT
TATATACAGATTATGAAAGTACAGTATACGTATTTCAGCTTATTTCGGAAGTAAGCTTACCGGAAGGTTCACCAATTCGA
ATTGAGTTCGATGGTGAGGAAGCGACAGGAGAAGTATTATCTGTACATGGATTAGAAATAGAATTGAAATTAAATGATTA
TATACAAGGTGAAATACGAGAAGCTGTTTTATACAGTGAACCGTGGCAATTGTTAGAGCAACTACAAGAGCGATTGAAAG
AAGCACGTAAAGATAAGTTAAAACGTAATCGTATAAAGCGTCTTGTTGATGGGACGAGCAGTCCGAAGCATATTGAAAAG
ATGAAAAATCCGAAAAATGAATTGGCGTATCGTTCGTTTTACAATCCGACAACGTACGTGTGGGGACCACCTGGAACAGG
GAAGTCTTACAATTTATCACGTATTATTTCGGCACATTATCAAAAAGGAAAATCGGTACTTGTATTAGCTCATAGTAATG
CGGCAGTGGACGTATTAATGAGTGAAGTCACGAAGCAAATTGAGAAGAAGAAGAAATGGACACCTGGCGAAATTGTTCGT
TACGGTTATAGCCAGCATGATCATATACGAAATCATGAAACGTTACTTGCGTCGAAGTTAGTTGAAACGACGAACGGATC
TTGGGGAGAAGAAAGACTCTATTTAGAGGAAACACGCCAAGATCTTCGAGAAAAGATTTTATCATATAAAGCGACTTCTG
CTGATAAGAAGCGTATACAAGAGATTGAAAGTGACCTTCGAAAGCAAAAAGCGAAAATTAAAGAAGTAGAAAAAGAATAC
ATTGAAAATGCGAAAGTAATCGGCGCGACTTTATCGAAATGTGCCATTGATTCACTTATTTATGAGCGTACATTTGATTT
AGTTGTCGTAGATGAAGTGAGTATGGCATATGTTCCGCAAATTGCATTAGCTGCTTCACTTGGAAAACGCATCGTAGTTT
GTGGGGACTTTTTACAGTTACCTCCAATTGCGATGGCGAACCATGAACTCGTTCGAAAATGGCTTGGGGAAGATATGTTT
TATCATGCTGGGATTGTTGAGTCTGTTAATAAATCAGAAGCACATCCGAACCTGTTTATGCTGCAGGAACAAAGACGTAT
GCATGCGGATATATCGAAGTTTACAAACTCATTTATTTATAAAAATAGAGTATATGATCATCCGTCTGTTTCAGAGCGTA
AAGAACTTGCGCAACTACAACCATTCGCAAATGAGGCGAGTGTTTTATTTGATACGGGATTAATGGGCGCTTTTTCGTTA
AAAGACGCTGCATCTGGTTCTCGTTTTAACATTATGTCTGGTTTAGTAGCGATGCAAATGATGTTAATTGGACTGTTAGA
CGGTGTTCAATCGATCGGTGTTGTTACACCTTACAGAGCACAATCCCGTTTCTTATCAACGTGTATCAGGGAAATATTGC
AGAGAACGAAATATCAAAATATACCAGTTTTAGCAGCAACAGTTCATAAGTTTCAAGGGTCTGAAAGGGACATGATGATT
TTTGATACAGTGGATAGTTATCCGCAAGAACGACCTGGTGTATTATTCTTTGATCACAAAAACCATCGCCTCGTCAATGT
AGCAGTGACAAGGGCGAGAGGGAAGTTCATTCAATTATCAGATTGTCATTATATGCGTAAAAACCTTTCTAGAAAACAAG
CGTTGTCACAATTAACGGCTCATATAGAACGCCACGGAGATGTGTATGATCGCACGACATCAAGACAATTGTGGGAACGA
AAAATATCGAAACGATTACGCTGGTTTATGGAAATGAATCTTGAGGAAACGAAAGGGCTATTAAAAGATATTTTAGCCGC
AAAACGAAAAATTATTATTTCACTTCCAAGTACAAAACAAGTAGATAAAAGAGTGTGGCAAGCGTTAATGCGTACAAATG
CGCAAATAACGGTGTATAGTGATGGACCAGTTCCACTGAAAAATGTAAAGTTACAAAGACAAAATAAAGCATTCCCGTTT
ATCGTAATTGATGATGAAATCTTCTGGGCAGGCGCACCGCTCACATCTCAAATGATATTTGAAGGTAGTACGGAATTTCC
GTACGTATGTGCAAGACTGCAAGCATCTGAGACAATTGGTGTATTAAAAGGATTTTTAGATATTCGGTAA

Upstream 100 bases:

>100_bases
CTTTCTGAAAATTATATACAATATAATATTGAAAATTAAGAAAATAAGCAAGATAAAAACCTTACAAATTTTAGCGTGTT
ATATGGTATAGTGAGAAAGT

Downstream 100 bases:

>100_bases
ATTCGGATAGGAATTCCTTGACTTTTAATCAGAATGAACTTAGAATGAATGTAATTTAATATAATTTTATGAAAATTCTT
ATCGCGAGAGGTTGAGGGAC

Product: DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MFGEKEGDYTMNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYESTVYVFQLISEVSLPEGSPIR
IEFDGEEATGEVLSVHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQERLKEARKDKLKRNRIKRLVDGTSSPKHIEK
MKNPKNELAYRSFYNPTTYVWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVR
YGYSQHDHIRNHETLLASKLVETTNGSWGEERLYLEETRQDLREKILSYKATSADKKRIQEIESDLRKQKAKIKEVEKEY
IENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAYVPQIALAASLGKRIVVCGDFLQLPPIAMANHELVRKWLGEDMF
YHAGIVESVNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTGLMGAFSL
KDAASGSRFNIMSGLVAMQMMLIGLLDGVQSIGVVTPYRAQSRFLSTCIREILQRTKYQNIPVLAATVHKFQGSERDMMI
FDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMRKNLSRKQALSQLTAHIERHGDVYDRTTSRQLWER
KISKRLRWFMEMNLEETKGLLKDILAAKRKIIISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPF
IVIDDEIFWAGAPLTSQMIFEGSTEFPYVCARLQASETIGVLKGFLDIR

Sequences:

>Translated_769_residues
MFGEKEGDYTMNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYESTVYVFQLISEVSLPEGSPIR
IEFDGEEATGEVLSVHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQERLKEARKDKLKRNRIKRLVDGTSSPKHIEK
MKNPKNELAYRSFYNPTTYVWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVR
YGYSQHDHIRNHETLLASKLVETTNGSWGEERLYLEETRQDLREKILSYKATSADKKRIQEIESDLRKQKAKIKEVEKEY
IENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAYVPQIALAASLGKRIVVCGDFLQLPPIAMANHELVRKWLGEDMF
YHAGIVESVNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTGLMGAFSL
KDAASGSRFNIMSGLVAMQMMLIGLLDGVQSIGVVTPYRAQSRFLSTCIREILQRTKYQNIPVLAATVHKFQGSERDMMI
FDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMRKNLSRKQALSQLTAHIERHGDVYDRTTSRQLWER
KISKRLRWFMEMNLEETKGLLKDILAAKRKIIISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPF
IVIDDEIFWAGAPLTSQMIFEGSTEFPYVCARLQASETIGVLKGFLDIR
>Mature_769_residues
MFGEKEGDYTMNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYESTVYVFQLISEVSLPEGSPIR
IEFDGEEATGEVLSVHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQERLKEARKDKLKRNRIKRLVDGTSSPKHIEK
MKNPKNELAYRSFYNPTTYVWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVR
YGYSQHDHIRNHETLLASKLVETTNGSWGEERLYLEETRQDLREKILSYKATSADKKRIQEIESDLRKQKAKIKEVEKEY
IENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAYVPQIALAASLGKRIVVCGDFLQLPPIAMANHELVRKWLGEDMF
YHAGIVESVNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTGLMGAFSL
KDAASGSRFNIMSGLVAMQMMLIGLLDGVQSIGVVTPYRAQSRFLSTCIREILQRTKYQNIPVLAATVHKFQGSERDMMI
FDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCHYMRKNLSRKQALSQLTAHIERHGDVYDRTTSRQLWER
KISKRLRWFMEMNLEETKGLLKDILAAKRKIIISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPF
IVIDDEIFWAGAPLTSQMIFEGSTEFPYVCARLQASETIGVLKGFLDIR

Specific function: Unknown

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA2/NAM7 helicase family [H]

Homologues:

Organism=Homo sapiens, GI119392094, Length=474, Percent_Identity=26.5822784810127, Blast_Score=97, Evalue=7e-20,
Organism=Homo sapiens, GI18375673, Length=433, Percent_Identity=25.1732101616628, Blast_Score=96, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71981659, Length=468, Percent_Identity=25, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17510163, Length=455, Percent_Identity=26.8131868131868, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17533987, Length=353, Percent_Identity=24.6458923512748, Blast_Score=71, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17533985, Length=353, Percent_Identity=24.3626062322946, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322835, Length=494, Percent_Identity=25.3036437246964, Blast_Score=92, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6323726, Length=467, Percent_Identity=24.1970021413276, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323462, Length=502, Percent_Identity=23.3067729083665, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI18859757, Length=460, Percent_Identity=26.0869565217391, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI221330969, Length=459, Percent_Identity=23.9651416122004, Blast_Score=81, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24660647, Length=459, Percent_Identity=23.5294117647059, Blast_Score=80, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR004483 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88254; Mature: 88254

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGEKEGDYTMNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYES
CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCEEEEECCCH
TVYVFQLISEVSLPEGSPIRIEFDGEEATGEVLSVHGLEIELKLNDYIQGEIREAVLYSE
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECEEEEEEECCHHHHHHHHHHHHCC
PWQLLEQLQERLKEARKDKLKRNRIKRLVDGTSSPKHIEKMKNPKNELAYRSFYNPTTYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCCEE
WGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVR
ECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHH
YGYSQHDHIRNHETLLASKLVETTNGSWGEERLYLEETRQDLREKILSYKATSADKKRIQ
CCCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EIESDLRKQKAKIKEVEKEYIENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAYVPQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHH
IALAASLGKRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFM
HHHHHHCCCEEEEECCHHHCCCCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEE
LQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTGLMGAFSL
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEC
KDAASGSRFNIMSGLVAMQMMLIGLLDGVQSIGVVTPYRAQSRFLSTCIREILQRTKYQN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
IPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLS
CCCHHHHHHHHCCCCCCEEEEECHHCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEEC
DCHYMRKNLSRKQALSQLTAHIERHGDVYDRTTSRQLWERKISKRLRWFMEMNLEETKGL
CHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LKDILAAKRKIIISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPF
HHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCEEECCCCCCCE
IVIDDEIFWAGAPLTSQMIFEGSTEFPYVCARLQASETIGVLKGFLDIR
EEECCCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGEKEGDYTMNTPTQTPSLSETMKEWHYALAYEIKHWKTIGGSKISIMNGRFLYTDYES
CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCEEEEECCCH
TVYVFQLISEVSLPEGSPIRIEFDGEEATGEVLSVHGLEIELKLNDYIQGEIREAVLYSE
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECEEEEEEECCHHHHHHHHHHHHCC
PWQLLEQLQERLKEARKDKLKRNRIKRLVDGTSSPKHIEKMKNPKNELAYRSFYNPTTYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCCEE
WGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVR
ECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHH
YGYSQHDHIRNHETLLASKLVETTNGSWGEERLYLEETRQDLREKILSYKATSADKKRIQ
CCCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EIESDLRKQKAKIKEVEKEYIENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAYVPQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHH
IALAASLGKRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFM
HHHHHHCCCEEEEECCHHHCCCCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEE
LQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTGLMGAFSL
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEC
KDAASGSRFNIMSGLVAMQMMLIGLLDGVQSIGVVTPYRAQSRFLSTCIREILQRTKYQN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
IPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLS
CCCHHHHHHHHCCCCCCEEEEECHHCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEEC
DCHYMRKNLSRKQALSQLTAHIERHGDVYDRTTSRQLWERKISKRLRWFMEMNLEETKGL
CHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LKDILAAKRKIIISLPSTKQVDKRVWQALMRTNAQITVYSDGPVPLKNVKLQRQNKAFPF
HHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCEEECCCCCCCE
IVIDDEIFWAGAPLTSQMIFEGSTEFPYVCARLQASETIGVLKGFLDIR
EEECCCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]