| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yndJ [H]
Identifier: 118477281
GI number: 118477281
Start: 1738789
End: 1740414
Strand: Direct
Name: yndJ [H]
Synonym: BALH_1592
Alternate gene names: 118477281
Gene position: 1738789-1740414 (Clockwise)
Preceding gene: 118477280
Following gene: 118477283
Centisome position: 33.08
GC content: 33.89
Gene sequence:
>1626_bases ATGAAAAATATAATAGTTGGGCTTGCTTGTTATATTATTTTTCTAATATGTGAGTGGCCCGATGTAAACCCAGTTGAAGC AATTATTTTATTATCTATTTTGTTATTTATACCGATGTCTTTTTGTATTATTGATAAAAGAGCACGAAATGGATCGTATT TATTATTTTATAAATCCGTATCGTTTTTATATCCGATAGCAGCGATTTGTGCAATGTTAGCTTTCGTAACAAATCAATAT ATCTTTGCGATAATTTGGTTTGTATATACGGGGATCGTTGCGTTATTTGGTATAAATAGATTACTAGAAAGAGGATGGAA ACCGTTAGAAGAGACAGCTATCGATAGTGCGTTTATTTATTTGTTTTTAGGTGGTTTCTGGTTTTTTGCTTCTGTAGCAA AGATTTCGATTATGCAGTTTACTTCTGACATTGTTTTACTCACAGCTGCACACTTTCATTATTCGGCGTTTCTATTGCCA TTATCAGCTGGTTTAATAGGGCGGAAGAGAGAAAAGAGCAGTAAAGTATATGCTGCTATTATGTTTATCATCGTTATTTC ACCTATGACAGTTGCAATAGGGATTACATACTCAAGGGTATTTGAATTTTTTGCAGTGTGCCTATATTTATGTGCGATTT ATGGTTATAGCATTTACGTTTGGAAAGCGAAATTTAATGCTATCAGCGCAAAAATCCTTCTAATCATATCGTCTAGTACA CTCATGGTAACAATTATGTTTTCACTTATATATTCGTACGGGAATTTGAAACATGTAATGACGATTACAATTGCTCAAAT GGTTTGGATTCACGGTGTTGTTAATGGAATTGGAGTAGCGTTGCCGGCATTTGTCGGCTGGATGATTGAAAAGAGTGTTC CGAACTATAAATATTACGGGAAACCAATGAGCAGATTAAGAGGAAAGGCGGCAGTTGGTGAAGCATTTTTACATAACAAA AATTTAATAGATAGAAAGGAATGCAGAGGTTTAGTTGATAAAATGAATGATTATTATAGTGAAGCATTTGACGCGACGAA GATTCCTTTAAGTATTGTTCACTTTTATGAAAATACAAAAGAGTATGAGTTACAATCACATATTAAATGGACTCGCTGGT TCCGCCCGGTAGCATTTTGCTATGAGAAAATGAGTAAACGTGTAGGGCAAATACATTTAGGAATGGGCGGCAAGTGGGAA ACGATGCACGGCTCTATCATCGGGGTAATAGATGAGAAGGATGGAAGAGAGAATGTAAGGGGTTGGCTAAGAAAAAATGA AGCAGAAGAATCTATTTTTGTAGCTCTTTACTCAAAACATACATATGAGAACGAGACATACATGAATATTGCATTACCTT TACCATATTCGAATATGACAGGGGTTTTGAAAGTATGTAATAAGAGTAAGGATTTAATCATTACTAGTAAGTTAAGAGAA AATGGTCAGGGAGATGAGGGTATTTATTTGTATACTCGTTTCTTTACAATACGTTTACCATTAGCAGAAACTTTTATTAT TAAAGAGAACAAGGATCAAATATTAGTAGCAAAACATAGAATGTGGATATTCGGAGTTAAGTTTTTAGAAATTGATTATG AGATTAAGAAAATGGAGGAGAAGTAA
Upstream 100 bases:
>100_bases AAACAAAACAGTGCTTTCGAATTCATGTACAAGTACGCAATCCGTTAATTGGTTCATTATTTTCATATAGGGGAACATTT GTGGAGAGGAAATAAATGAT
Downstream 100 bases:
>100_bases GAAAAGCTTGGAGGGATTCCAAGCTTTTTTACGTATGGGTAAGGGTCATAGCAACTTGTTTATCTAAATCGCGATCCCAA ACACGTTGAATTTCAAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSVSFLYPIAAICAMLAFVTNQY IFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIYLFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLP LSAGLIGRKREKSSKVYAAIMFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYGKPMSRLRGKAAVGEAFLHNK NLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTKEYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWE TMHGSIIGVIDEKDGRENVRGWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEEK
Sequences:
>Translated_541_residues MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSVSFLYPIAAICAMLAFVTNQY IFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIYLFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLP LSAGLIGRKREKSSKVYAAIMFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYGKPMSRLRGKAAVGEAFLHNK NLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTKEYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWE TMHGSIIGVIDEKDGRENVRGWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEEK >Mature_541_residues MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSVSFLYPIAAICAMLAFVTNQY IFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIYLFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLP LSAGLIGRKREKSSKVYAAIMFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYGKPMSRLRGKAAVGEAFLHNK NLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTKEYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWE TMHGSIIGVIDEKDGRENVRGWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62149; Mature: 62149
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSV CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHH SFLYPIAAICAMLAFVTNQYIFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLPLSAGLIGRKREKSSKVYAAI HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST HHHHHHHCHHHEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEEEEEEEEECCH LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC KPMSRLRGKAAVGEAFLHNKNLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTK CCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHCCC EYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWETMHGSIIGVIDEKDGRENVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCEEEEEECCCCHHHHH GWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE HHHHCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEHHHC NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEE CCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEECCEEEEEEEEEEECHHHHHCCC K C >Mature Secondary Structure MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSV CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHH SFLYPIAAICAMLAFVTNQYIFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLPLSAGLIGRKREKSSKVYAAI HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST HHHHHHHCHHHEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEEEEEEEEECCH LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC KPMSRLRGKAAVGEAFLHNKNLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTK CCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHCCC EYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWETMHGSIIGVIDEKDGRENVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCEEEEEECCCCHHHHH GWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE HHHHCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEHHHC NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEE CCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEECCEEEEEEEEEEECHHHHHCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]