Definition Bacillus thuringiensis str. Al Hakam chromosome, complete genome.
Accession NC_008600
Length 5,257,091

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The map label for this gene is yndJ [H]

Identifier: 118477281

GI number: 118477281

Start: 1738789

End: 1740414

Strand: Direct

Name: yndJ [H]

Synonym: BALH_1592

Alternate gene names: 118477281

Gene position: 1738789-1740414 (Clockwise)

Preceding gene: 118477280

Following gene: 118477283

Centisome position: 33.08

GC content: 33.89

Gene sequence:

>1626_bases
ATGAAAAATATAATAGTTGGGCTTGCTTGTTATATTATTTTTCTAATATGTGAGTGGCCCGATGTAAACCCAGTTGAAGC
AATTATTTTATTATCTATTTTGTTATTTATACCGATGTCTTTTTGTATTATTGATAAAAGAGCACGAAATGGATCGTATT
TATTATTTTATAAATCCGTATCGTTTTTATATCCGATAGCAGCGATTTGTGCAATGTTAGCTTTCGTAACAAATCAATAT
ATCTTTGCGATAATTTGGTTTGTATATACGGGGATCGTTGCGTTATTTGGTATAAATAGATTACTAGAAAGAGGATGGAA
ACCGTTAGAAGAGACAGCTATCGATAGTGCGTTTATTTATTTGTTTTTAGGTGGTTTCTGGTTTTTTGCTTCTGTAGCAA
AGATTTCGATTATGCAGTTTACTTCTGACATTGTTTTACTCACAGCTGCACACTTTCATTATTCGGCGTTTCTATTGCCA
TTATCAGCTGGTTTAATAGGGCGGAAGAGAGAAAAGAGCAGTAAAGTATATGCTGCTATTATGTTTATCATCGTTATTTC
ACCTATGACAGTTGCAATAGGGATTACATACTCAAGGGTATTTGAATTTTTTGCAGTGTGCCTATATTTATGTGCGATTT
ATGGTTATAGCATTTACGTTTGGAAAGCGAAATTTAATGCTATCAGCGCAAAAATCCTTCTAATCATATCGTCTAGTACA
CTCATGGTAACAATTATGTTTTCACTTATATATTCGTACGGGAATTTGAAACATGTAATGACGATTACAATTGCTCAAAT
GGTTTGGATTCACGGTGTTGTTAATGGAATTGGAGTAGCGTTGCCGGCATTTGTCGGCTGGATGATTGAAAAGAGTGTTC
CGAACTATAAATATTACGGGAAACCAATGAGCAGATTAAGAGGAAAGGCGGCAGTTGGTGAAGCATTTTTACATAACAAA
AATTTAATAGATAGAAAGGAATGCAGAGGTTTAGTTGATAAAATGAATGATTATTATAGTGAAGCATTTGACGCGACGAA
GATTCCTTTAAGTATTGTTCACTTTTATGAAAATACAAAAGAGTATGAGTTACAATCACATATTAAATGGACTCGCTGGT
TCCGCCCGGTAGCATTTTGCTATGAGAAAATGAGTAAACGTGTAGGGCAAATACATTTAGGAATGGGCGGCAAGTGGGAA
ACGATGCACGGCTCTATCATCGGGGTAATAGATGAGAAGGATGGAAGAGAGAATGTAAGGGGTTGGCTAAGAAAAAATGA
AGCAGAAGAATCTATTTTTGTAGCTCTTTACTCAAAACATACATATGAGAACGAGACATACATGAATATTGCATTACCTT
TACCATATTCGAATATGACAGGGGTTTTGAAAGTATGTAATAAGAGTAAGGATTTAATCATTACTAGTAAGTTAAGAGAA
AATGGTCAGGGAGATGAGGGTATTTATTTGTATACTCGTTTCTTTACAATACGTTTACCATTAGCAGAAACTTTTATTAT
TAAAGAGAACAAGGATCAAATATTAGTAGCAAAACATAGAATGTGGATATTCGGAGTTAAGTTTTTAGAAATTGATTATG
AGATTAAGAAAATGGAGGAGAAGTAA

Upstream 100 bases:

>100_bases
AAACAAAACAGTGCTTTCGAATTCATGTACAAGTACGCAATCCGTTAATTGGTTCATTATTTTCATATAGGGGAACATTT
GTGGAGAGGAAATAAATGAT

Downstream 100 bases:

>100_bases
GAAAAGCTTGGAGGGATTCCAAGCTTTTTTACGTATGGGTAAGGGTCATAGCAACTTGTTTATCTAAATCGCGATCCCAA
ACACGTTGAATTTCAAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSVSFLYPIAAICAMLAFVTNQY
IFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIYLFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLP
LSAGLIGRKREKSSKVYAAIMFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYGKPMSRLRGKAAVGEAFLHNK
NLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTKEYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWE
TMHGSIIGVIDEKDGRENVRGWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE
NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEEK

Sequences:

>Translated_541_residues
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSVSFLYPIAAICAMLAFVTNQY
IFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIYLFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLP
LSAGLIGRKREKSSKVYAAIMFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYGKPMSRLRGKAAVGEAFLHNK
NLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTKEYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWE
TMHGSIIGVIDEKDGRENVRGWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE
NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEEK
>Mature_541_residues
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSVSFLYPIAAICAMLAFVTNQY
IFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIYLFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLP
LSAGLIGRKREKSSKVYAAIMFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYGKPMSRLRGKAAVGEAFLHNK
NLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTKEYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWE
TMHGSIIGVIDEKDGRENVRGWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE
NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62149; Mature: 62149

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSV
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHH
SFLYPIAAICAMLAFVTNQYIFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLPLSAGLIGRKREKSSKVYAAI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
HHHHHHHCHHHEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEEEEEEEEECCH
LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
KPMSRLRGKAAVGEAFLHNKNLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTK
CCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHCCC
EYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWETMHGSIIGVIDEKDGRENVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCEEEEEECCCCHHHHH
GWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE
HHHHCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEHHHC
NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEE
CCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEECCEEEEEEEEEEECHHHHHCCC
K
C
>Mature Secondary Structure
MKNIIVGLACYIIFLICEWPDVNPVEAIILLSILLFIPMSFCIIDKRARNGSYLLFYKSV
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHH
SFLYPIAAICAMLAFVTNQYIFAIIWFVYTGIVALFGINRLLERGWKPLEETAIDSAFIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LFLGGFWFFASVAKISIMQFTSDIVLLTAAHFHYSAFLLPLSAGLIGRKREKSSKVYAAI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MFIIVISPMTVAIGITYSRVFEFFAVCLYLCAIYGYSIYVWKAKFNAISAKILLIISSST
HHHHHHHCHHHEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEEEEEEEEECCH
LMVTIMFSLIYSYGNLKHVMTITIAQMVWIHGVVNGIGVALPAFVGWMIEKSVPNYKYYG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
KPMSRLRGKAAVGEAFLHNKNLIDRKECRGLVDKMNDYYSEAFDATKIPLSIVHFYENTK
CCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHCCC
EYELQSHIKWTRWFRPVAFCYEKMSKRVGQIHLGMGGKWETMHGSIIGVIDEKDGRENVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEECCCEEEEEECCCCHHHHH
GWLRKNEAEESIFVALYSKHTYENETYMNIALPLPYSNMTGVLKVCNKSKDLIITSKLRE
HHHHCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEHHHC
NGQGDEGIYLYTRFFTIRLPLAETFIIKENKDQILVAKHRMWIFGVKFLEIDYEIKKMEE
CCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEECCEEEEEEEEEEECHHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]