| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yndH [H]
Identifier: 118477280
GI number: 118477280
Start: 1738178
End: 1738783
Strand: Direct
Name: yndH [H]
Synonym: BALH_1591
Alternate gene names: 118477280
Gene position: 1738178-1738783 (Clockwise)
Preceding gene: 118477279
Following gene: 118477281
Centisome position: 33.06
GC content: 33.5
Gene sequence:
>606_bases ATGGCTAATATGTATGAAAGACTATTAGGGGATTCTTATAAAAAACTTCATCCAAAATTACAGAAACGCTATGAGATTAC AGAAGAAAATAGCTTTACTGGAGAAGGAAAGATGGATGAAATTTACGGAGGTTCTTTTTTCGTAAAATTGATATTAAAAA TTGCATCGAAGTTTCGAATGTTTTTCTCTGAGCGGGGGAAGGAAGTGCCATTTACAATACATAATACCGCTGAGCGAGAT GGAAACGGAAATGAATTTGTGCGATGGAATCGTACTTTTTACTTTCGTAATAAGAAAAGATATTTTAATGCGGTAATGAA ATTCGATGAAAATGAAATTGTAGATTATTTTGGTGAACCACACATACTTGTTTCTACACTGAATTTTCATATTGATGAGA TGGGGGCGATGCATATTTCTTCAAAGAAACAATGGTTTTACATGTTTAGAAGAAAAATCCCGTTACCTAGATTCTTATAC GGAGAGGCCAACATTGTAGAAAGTTATGATGAAACAAAACAGTGCTTTCGAATTCATGTACAAGTACGCAATCCGTTAAT TGGTTCATTATTTTCATATAGGGGAACATTTGTGGAGAGGAAATAA
Upstream 100 bases:
>100_bases ATTAAACGTTTTACTAATGGGGGTATCGATTGTCGGTTATATAAATAGTTTTGATTTACCAAGTGCAAAAAATTGCAAGA GGAAGAGAAAGGGATAATGT
Downstream 100 bases:
>100_bases ATGATATGAAAAATATAATAGTTGGGCTTGCTTGTTATATTATTTTTCTAATATGTGAGTGGCCCGATGTAAACCCAGTT GAAGCAATTATTTTATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MANMYERLLGDSYKKLHPKLQKRYEITEENSFTGEGKMDEIYGGSFFVKLILKIASKFRMFFSERGKEVPFTIHNTAERD GNGNEFVRWNRTFYFRNKKRYFNAVMKFDENEIVDYFGEPHILVSTLNFHIDEMGAMHISSKKQWFYMFRRKIPLPRFLY GEANIVESYDETKQCFRIHVQVRNPLIGSLFSYRGTFVERK
Sequences:
>Translated_201_residues MANMYERLLGDSYKKLHPKLQKRYEITEENSFTGEGKMDEIYGGSFFVKLILKIASKFRMFFSERGKEVPFTIHNTAERD GNGNEFVRWNRTFYFRNKKRYFNAVMKFDENEIVDYFGEPHILVSTLNFHIDEMGAMHISSKKQWFYMFRRKIPLPRFLY GEANIVESYDETKQCFRIHVQVRNPLIGSLFSYRGTFVERK >Mature_200_residues ANMYERLLGDSYKKLHPKLQKRYEITEENSFTGEGKMDEIYGGSFFVKLILKIASKFRMFFSERGKEVPFTIHNTAERDG NGNEFVRWNRTFYFRNKKRYFNAVMKFDENEIVDYFGEPHILVSTLNFHIDEMGAMHISSKKQWFYMFRRKIPLPRFLYG EANIVESYDETKQCFRIHVQVRNPLIGSLFSYRGTFVERK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24132; Mature: 24001
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANMYERLLGDSYKKLHPKLQKRYEITEENSFTGEGKMDEIYGGSFFVKLILKIASKFRM CCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH FFSERGKEVPFTIHNTAERDGNGNEFVRWNRTFYFRNKKRYFNAVMKFDENEIVDYFGEP HHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHCCCCHHHHHCCCC HILVSTLNFHIDEMGAMHISSKKQWFYMFRRKIPLPRFLYGEANIVESYDETKQCFRIHV EEEEEEEHHHHHHHCCEECCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHEEEE QVRNPLIGSLFSYRGTFVERK EECCCHHHHHHHHCCCEECCC >Mature Secondary Structure ANMYERLLGDSYKKLHPKLQKRYEITEENSFTGEGKMDEIYGGSFFVKLILKIASKFRM CHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH FFSERGKEVPFTIHNTAERDGNGNEFVRWNRTFYFRNKKRYFNAVMKFDENEIVDYFGEP HHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHCCCCHHHHHCCCC HILVSTLNFHIDEMGAMHISSKKQWFYMFRRKIPLPRFLYGEANIVESYDETKQCFRIHV EEEEEEEHHHHHHHCCEECCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHEEEE QVRNPLIGSLFSYRGTFVERK EECCCHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]