Click here to switch to the map view.

The map label for this gene is sipW [H]

Identifier: 118476852

GI number: 118476852

Start: 1296100

End: 1296714

Strand: Direct

Name: sipW [H]

Synonym: BALH_1140

Alternate gene names: 118476852

Gene position: 1296100-1296714 (Clockwise)

Preceding gene: 118476851

Following gene: 118476853

Centisome position: 24.65

GC content: 35.93

Gene sequence:

>615_bases
TTGCATACTTCAAATAATATAAAACAACGGAGAGGGAGAGAAACGATGAAATTAATTTGGAAGGTGATTAGCAACGTTAT
CTCATTTGTTTTATTTGCGTTAATGGTTTGCTTAGCTTTTGTAGTTATTTCTTCAAAAGCGAGCGGTGGTGATCCAACGG
TGATGGGATATCAATTTAAGAGCGTTCTTTCAGGGTCGATGGAACCAACATTTTTAACAGGATCAATTATTGCGATAGAG
CCGACGAAAGATGGTTCTAAATATCAAAAAGGTGATGTTATTACCTTTAAAGAGAAAGATGAAAAAATTATCACTCACCG
TATTATCGGTGTAAAAGATATAAATGGAAAAGTAATGTATGAAACAAAAGGAGATAACAACAACGGGCCAGATTTAGAAC
CGGTACTTGCGGAGAATGTTATTGGGAAATATGCAGATATTACAGTTCCTTATGCAGGGTATGCATTAAATTATGCGAAT
TCAAAAGCGGGAGCTGCTTTGCTTCTTATTATTCCAGGAGTCTTTTTACTAGGCTATTCCGCTATTACTATCTTTAGCGC
GATTCGTAGCATTGATGGAGAAAAGAAAGAGAAAAAAGTAGAACAATCCGTCTAG

Upstream 100 bases:

>100_bases
TATATTGAAAATAACTAATAATTGTAAATTTTCTTATTGCATTTCTAATATGTTCGTTATATTATTTAGTTGTGTTCTTG
TTAAAGAACATAACTAAATA

Downstream 100 bases:

>100_bases
TTTGTTTGGTTATACTTTCCGATTAGGAAGTTGACAAATATATAGATTAAGGGGATATGGACATGACTTTAAAGAAAAAA
TTAGGAATGGGTATCGCATC

Product: signal peptidase SipW

Products: NA

Alternate protein names: SPase I; Leader peptidase I [H]

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MHTSNNIKQRRGRETMKLIWKVISNVISFVLFALMVCLAFVVISSKASGGDPTVMGYQFKSVLSGSMEPTFLTGSIIAIE
PTKDGSKYQKGDVITFKEKDEKIITHRIIGVKDINGKVMYETKGDNNNGPDLEPVLAENVIGKYADITVPYAGYALNYAN
SKAGAALLLIIPGVFLLGYSAITIFSAIRSIDGEKKEKKVEQSV

Sequences:

>Translated_204_residues
MHTSNNIKQRRGRETMKLIWKVISNVISFVLFALMVCLAFVVISSKASGGDPTVMGYQFKSVLSGSMEPTFLTGSIIAIE
PTKDGSKYQKGDVITFKEKDEKIITHRIIGVKDINGKVMYETKGDNNNGPDLEPVLAENVIGKYADITVPYAGYALNYAN
SKAGAALLLIIPGVFLLGYSAITIFSAIRSIDGEKKEKKVEQSV
>Mature_204_residues
MHTSNNIKQRRGRETMKLIWKVISNVISFVLFALMVCLAFVVISSKASGGDPTVMGYQFKSVLSGSMEPTFLTGSIIAIE
PTKDGSKYQKGDVITFKEKDEKIITHRIIGVKDINGKVMYETKGDNNNGPDLEPVLAENVIGKYADITVPYAGYALNYAN
SKAGAALLLIIPGVFLLGYSAITIFSAIRSIDGEKKEKKVEQSV

Specific function: Unknown

COG id: COG0681

COG function: function code U; Signal peptidase I

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S26B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056
- InterPro:   IPR001733 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: =3.4.21.89 [H]

Molecular weight: Translated: 22272; Mature: 22272

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00061 ADH_SHORT ; PS00501 SPASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTSNNIKQRRGRETMKLIWKVISNVISFVLFALMVCLAFVVISSKASGGDPTVMGYQFK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHH
SVLSGSMEPTFLTGSIIAIEPTKDGSKYQKGDVITFKEKDEKIITHRIIGVKDINGKVMY
HHHCCCCCCEEEECEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHEEEEEECCCEEEE
ETKGDNNNGPDLEPVLAENVIGKYADITVPYAGYALNYANSKAGAALLLIIPGVFLLGYS
EECCCCCCCCCCCHHHHHHHHCCHHCEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
AITIFSAIRSIDGEKKEKKVEQSV
HHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MHTSNNIKQRRGRETMKLIWKVISNVISFVLFALMVCLAFVVISSKASGGDPTVMGYQFK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHH
SVLSGSMEPTFLTGSIIAIEPTKDGSKYQKGDVITFKEKDEKIITHRIIGVKDINGKVMY
HHHCCCCCCEEEECEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHEEEEEECCCEEEE
ETKGDNNNGPDLEPVLAENVIGKYADITVPYAGYALNYANSKAGAALLLIIPGVFLLGYS
EECCCCCCCCCCCHHHHHHHHCCHHCEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
AITIFSAIRSIDGEKKEKKVEQSV
HHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9823656 [H]