| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is 118476571
Identifier: 118476571
GI number: 118476571
Start: 975280
End: 976140
Strand: Direct
Name: 118476571
Synonym: BALH_0844
Alternate gene names: NA
Gene position: 975280-976140 (Clockwise)
Preceding gene: 118476570
Following gene: 118476572
Centisome position: 18.55
GC content: 47.15
Gene sequence:
>861_bases ATGGCGGTGTATCGTACTGTGCAGGTGAATTTTTGGCAGGATGATTTTGTTTTGGATTTAACGCCGGAGGAGCGGTATTT TTATGTGTATTTGTTAACTTGTTCGAAGACGACGCAGTGTGGGATTTTTCCTTTTCCGAAGCGGTTAGCTGAGATGGAGA CTGGTTATAATCGGGAGACTGTTGATAAGCTTGTGCAGCGCTTCATTGATTATGGGAAGATTCTTTATGATGCGGATACG CGGGAGTTATTTATTTTGAATTGGCTTCGTTATAATCCGGTGACGAATACGAATGTGGAGAAGTGTGTGCTTCGTGAGCT TAAGGGTGTGAAGAATAAGGAGTTTGTACATATGTTTCTTCAGAAGTGCGTAGAGGAGGAGCTGAATGTTCCGATGCTTT TAGCGCATTTCGGTATGCCGAGTGATTTGGCTGTGGATGATGTTGAGCCAGTTTGCGAGGAGACAGAGGAAGAAGAGGTT ATAGAGGAAGAGACGGGAAGTCGCGTGTTTTCTTTTTATGAGCAACATTTCGGTAGTTTGTCTCCGCATACTGTGGAGGA ACTGAGTGCGTGGATGGAGGATTTGTCAGAGGAGCTTGTGCTGAAGGCTCTTCAAATTGCGTTTGAGAATAATAAGCGGA CGGTTGCTTATGTGAAGGGGATTTTGAGAGGGTGGCACGGGAAAGGATTTACGAAAGTTTCTGAGGTTGAGGCGGATACG GCGAGCTTTAGGAAGAAGGAGTCGTCTGTTAGTACGGGGGAGACGGAGGAGTTTTTGGCGAGGTGTGGGGAGTGGGAGAA GAATGCGCCGTCTGAGGAAGAGTTGCAGCGCTTTTTAGCGGAGCGCGGGTGGCGTCCATGA
Upstream 100 bases:
>100_bases AAAAAATTTTTGAAATAATACGCCAAAAACCCGCCCCTCCTTCCTATATATAGTACAAAGAGGAAATTTTCATTTTTGAA TTAGGACGGGAGGAATTGGG
Downstream 100 bases:
>100_bases GTATTCAAAATGTGGAGGCGGAAAAGACGGTATTAGGTTCTCTATTACTTGATGGAGAGCTTATTAAGGAGTGCCGTTTG ACGGAGCAGTATTTTTCGAT
Product: DnaD domain-containing protein
Products: NA
Alternate protein names: DNAD Domain Protein; Phage Protein; Primosome DNAD Subunit; DNAA Analog DnaD Domain Protein; DNAD Protein; DNAA Domain-Containing Protein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAVYRTVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRETVDKLVQRFIDYGKILYDADT RELFILNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFLQKCVEEELNVPMLLAHFGMPSDLAVDDVEPVCEETEEEEV IEEETGSRVFSFYEQHFGSLSPHTVEELSAWMEDLSEELVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVSEVEADT ASFRKKESSVSTGETEEFLARCGEWEKNAPSEEELQRFLAERGWRP
Sequences:
>Translated_286_residues MAVYRTVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRETVDKLVQRFIDYGKILYDADT RELFILNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFLQKCVEEELNVPMLLAHFGMPSDLAVDDVEPVCEETEEEEV IEEETGSRVFSFYEQHFGSLSPHTVEELSAWMEDLSEELVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVSEVEADT ASFRKKESSVSTGETEEFLARCGEWEKNAPSEEELQRFLAERGWRP >Mature_285_residues AVYRTVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRETVDKLVQRFIDYGKILYDADTR ELFILNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFLQKCVEEELNVPMLLAHFGMPSDLAVDDVEPVCEETEEEEVI EEETGSRVFSFYEQHFGSLSPHTVEELSAWMEDLSEELVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVSEVEADTA SFRKKESSVSTGETEEFLARCGEWEKNAPSEEELQRFLAERGWRP
Specific function: Unknown
COG id: COG3935
COG function: function code L; Putative primosome component and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33370; Mature: 33239
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYRTVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRET CCEEEEEEEEEECCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHH VDKLVQRFIDYGKILYDADTRELFILNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFL HHHHHHHHHHHCCEEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH QKCVEEELNVPMLLAHFGMPSDLAVDDVEPVCEETEEEEVIEEETGSRVFSFYEQHFGSL HHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC SPHTVEELSAWMEDLSEELVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVSEVEADT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH ASFRKKESSVSTGETEEFLARCGEWEKNAPSEEELQRFLAERGWRP HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure AVYRTVQVNFWQDDFVLDLTPEERYFYVYLLTCSKTTQCGIFPFPKRLAEMETGYNRET CEEEEEEEEEECCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHH VDKLVQRFIDYGKILYDADTRELFILNWLRYNPVTNTNVEKCVLRELKGVKNKEFVHMFL HHHHHHHHHHHCCEEECCCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH QKCVEEELNVPMLLAHFGMPSDLAVDDVEPVCEETEEEEVIEEETGSRVFSFYEQHFGSL HHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC SPHTVEELSAWMEDLSEELVLKALQIAFENNKRTVAYVKGILRGWHGKGFTKVSEVEADT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH ASFRKKESSVSTGETEEFLARCGEWEKNAPSEEELQRFLAERGWRP HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA