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The map label for this gene is yrkF [H]

Identifier: 118476441

GI number: 118476441

Start: 814712

End: 815287

Strand: Direct

Name: yrkF [H]

Synonym: BALH_0705

Alternate gene names: 118476441

Gene position: 814712-815287 (Clockwise)

Preceding gene: 118476440

Following gene: 118476442

Centisome position: 15.5

GC content: 38.72

Gene sequence:

>576_bases
GTGGAGGAATCGACTATGAGTATAAAAGTGGATATGAGTTTAGATTGCAAAGGTTTGGCTTGTCCGATGCCGATTGTGAA
AACGAAGAAGGCGATAGAAGGATTAGCATCAGGGCAAGTGATTGAAGTTAAGGCAACAGATAAAGGGTCTACTGTAGATA
TAAAAAGTTGGGCGAATAAAGTAGGGCATCAATATATCGGTACAAAACACGAGGGCGATATTTTGATGCATTACGTTAGA
AAAGCACATGAGCATGAAGTGAATGAAGTTGTGAAATATCCTCATACAATTACGAATACAGAGTTGGAAGAGATATTAGT
AAGTGGTGAAGAGTGTACTGTATTAGATGTTCGTGAAGCAGCGGAATTCGCTTTTGGTCATATTCCATCTGCTACTTCGA
TGCCGTTAGGTGAACTAGAAAGTCTAGTCTTAGATAAGACGAAGCAAATTTATGTTGTTTGCCGAACTGGTAACCGCAGT
GATGTAGCTTGCCAAATGTTGAAAGAGAAAGGTTATACAAATGTGAAAAATGTTATTCCCGGTATGATAGAGTGGCAAGG
GAATATAGAGAATTAA

Upstream 100 bases:

>100_bases
GTTCAATTACTTGTAAAAAGCCGATAATCTGTCAAACGTAAGTGTTGACAGATTTTCAAAAACATTTTAGTATACCCCTG
CAGGTATATGTATATAAATT

Downstream 100 bases:

>100_bases
ATTTTTTTAAATAAAAATATACCTCAGGGGGTAAGAAGATGGAAGTTAAATTATTACAAGCAAAAGATGTTGCAGAGAAA
GTTTTATTCGGAGAGTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MEESTMSIKVDMSLDCKGLACPMPIVKTKKAIEGLASGQVIEVKATDKGSTVDIKSWANKVGHQYIGTKHEGDILMHYVR
KAHEHEVNEVVKYPHTITNTELEEILVSGEECTVLDVREAAEFAFGHIPSATSMPLGELESLVLDKTKQIYVVCRTGNRS
DVACQMLKEKGYTNVKNVIPGMIEWQGNIEN

Sequences:

>Translated_191_residues
MEESTMSIKVDMSLDCKGLACPMPIVKTKKAIEGLASGQVIEVKATDKGSTVDIKSWANKVGHQYIGTKHEGDILMHYVR
KAHEHEVNEVVKYPHTITNTELEEILVSGEECTVLDVREAAEFAFGHIPSATSMPLGELESLVLDKTKQIYVVCRTGNRS
DVACQMLKEKGYTNVKNVIPGMIEWQGNIEN
>Mature_191_residues
MEESTMSIKVDMSLDCKGLACPMPIVKTKKAIEGLASGQVIEVKATDKGSTVDIKSWANKVGHQYIGTKHEGDILMHYVR
KAHEHEVNEVVKYPHTITNTELEEILVSGEECTVLDVREAAEFAFGHIPSATSMPLGELESLVLDKTKQIYVVCRTGNRS
DVACQMLKEKGYTNVKNVIPGMIEWQGNIEN

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 21148; Mature: 21148

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS50206 RHODANESE_3 ; PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEESTMSIKVDMSLDCKGLACPMPIVKTKKAIEGLASGQVIEVKATDKGSTVDIKSWANK
CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHH
VGHQYIGTKHEGDILMHYVRKAHEHEVNEVVKYPHTITNTELEEILVSGEECTVLDVREA
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEHHHH
AEFAFGHIPSATSMPLGELESLVLDKTKQIYVVCRTGNRSDVACQMLKEKGYTNVKNVIP
HHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHCC
GMIEWQGNIEN
CEEEECCCCCC
>Mature Secondary Structure
MEESTMSIKVDMSLDCKGLACPMPIVKTKKAIEGLASGQVIEVKATDKGSTVDIKSWANK
CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHH
VGHQYIGTKHEGDILMHYVRKAHEHEVNEVVKYPHTITNTELEEILVSGEECTVLDVREA
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEHHHH
AEFAFGHIPSATSMPLGELESLVLDKTKQIYVVCRTGNRSDVACQMLKEKGYTNVKNVIP
HHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHCC
GMIEWQGNIEN
CEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]