| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118476184
Identifier: 118476184
GI number: 118476184
Start: 492537
End: 493232
Strand: Reverse
Name: 118476184
Synonym: BALH_0432
Alternate gene names: NA
Gene position: 493232-492537 (Counterclockwise)
Preceding gene: 118476185
Following gene: 118476180
Centisome position: 9.38
GC content: 35.63
Gene sequence:
>696_bases ATGCTCAACATTTTTTCAACAATAAAAAGGAGTGTCTTCGCTATGCCTAAAGAAAATCCAAATGAGCGGCTTAGTAGATT AATAAAAAAACTTTTAAAAGAACGTGCCTTATCTATGCGCCAACTCGGAATGCTTACAAATATTGATCCCGCAACAATCT CAAGAATTATGAATGGTAAACAACCGCCAAAACAAAAGCATCTACAAAAATTCGCAGAATGTCTGCAAGTTCCACCCCAA TTGTTATTTGATGAAATGTATCCAGATTCTCCTCACATTAATAAAGAAAAGACGGATATGTACACATCTCTTGATACAAT TCAGCAAACGCTGCAATCCTCTAACTTATTCGATTTCGACTACACAACAACCCGCGTAAAACAAGAACTTGAAAACTATG AACGATATGCTCAAACAACAGAGGGTGAAAAGCGTATTCATGAAAGTTTCGCAAGCAAGTTAGAACAAATTGATAGTGCT GGCCCTTTCATTGAACAATTAACAGATATGTATCAACAATTTTGCAATGAAACGATTCCAAAAGAAGAGCGTGCAGTTCT TGGCGGCGCATTACTGTATTTCATTTTATCGACAGATATTATTCCTGACTATCTCTTTCCAATTGGCTATTTAGATGATG CAATTGCTGTTGAATTAGCAAAAGAGAAATTAATCGAACTAAAACGAAAGACATAG
Upstream 100 bases:
>100_bases CTGCCGTACTCATAAACAGTCACCCCTTTTTCTCACTTTTCCATGCATCTTATGAAAATGTTGAGCAACTGTGCCTGTCT GTTTCATATACATGTAATAA
Downstream 100 bases:
>100_bases AAAAATAAAGAACTATTTCAGTTGTTTCTATTCAACTCTGAAATAGTTCACTAAAAAATCGTACAAGTATACATACCTGT ACGATTTCAACATACTAATC
Product: transcriptional regulator
Products: NA
Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; XRE Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator XRE Family
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLNIFSTIKRSVFAMPKENPNERLSRLIKKLLKERALSMRQLGMLTNIDPATISRIMNGKQPPKQKHLQKFAECLQVPPQ LLFDEMYPDSPHINKEKTDMYTSLDTIQQTLQSSNLFDFDYTTTRVKQELENYERYAQTTEGEKRIHESFASKLEQIDSA GPFIEQLTDMYQQFCNETIPKEERAVLGGALLYFILSTDIIPDYLFPIGYLDDAIAVELAKEKLIELKRKT
Sequences:
>Translated_231_residues MLNIFSTIKRSVFAMPKENPNERLSRLIKKLLKERALSMRQLGMLTNIDPATISRIMNGKQPPKQKHLQKFAECLQVPPQ LLFDEMYPDSPHINKEKTDMYTSLDTIQQTLQSSNLFDFDYTTTRVKQELENYERYAQTTEGEKRIHESFASKLEQIDSA GPFIEQLTDMYQQFCNETIPKEERAVLGGALLYFILSTDIIPDYLFPIGYLDDAIAVELAKEKLIELKRKT >Mature_231_residues MLNIFSTIKRSVFAMPKENPNERLSRLIKKLLKERALSMRQLGMLTNIDPATISRIMNGKQPPKQKHLQKFAECLQVPPQ LLFDEMYPDSPHINKEKTDMYTSLDTIQQTLQSSNLFDFDYTTTRVKQELENYERYAQTTEGEKRIHESFASKLEQIDSA GPFIEQLTDMYQQFCNETIPKEERAVLGGALLYFILSTDIIPDYLFPIGYLDDAIAVELAKEKLIELKRKT
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26806; Mature: 26806
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNIFSTIKRSVFAMPKENPNERLSRLIKKLLKERALSMRQLGMLTNIDPATISRIMNGK CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC QPPKQKHLQKFAECLQVPPQLLFDEMYPDSPHINKEKTDMYTSLDTIQQTLQSSNLFDFD CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC YTTTRVKQELENYERYAQTTEGEKRIHESFASKLEQIDSAGPFIEQLTDMYQQFCNETIP HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC KEERAVLGGALLYFILSTDIIPDYLFPIGYLDDAIAVELAKEKLIELKRKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLNIFSTIKRSVFAMPKENPNERLSRLIKKLLKERALSMRQLGMLTNIDPATISRIMNGK CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC QPPKQKHLQKFAECLQVPPQLLFDEMYPDSPHINKEKTDMYTSLDTIQQTLQSSNLFDFD CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC YTTTRVKQELENYERYAQTTEGEKRIHESFASKLEQIDSAGPFIEQLTDMYQQFCNETIP HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC KEERAVLGGALLYFILSTDIIPDYLFPIGYLDDAIAVELAKEKLIELKRKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA