| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118475938
Identifier: 118475938
GI number: 118475938
Start: 178981
End: 180267
Strand: Reverse
Name: 118475938
Synonym: BALH_0170
Alternate gene names: NA
Gene position: 180267-178981 (Counterclockwise)
Preceding gene: 118475940
Following gene: 118475937
Centisome position: 3.43
GC content: 34.03
Gene sequence:
>1287_bases ATGTCAAAAAAATTACTTTCTTTATTTTCTGCAGTAATCGTAGCAGCTTTTGTAATAACCGGCTGTGGTCAAAGCGATAC GACAAATAAAGAACAAAAAGAAAATGCAGCCAAAGAAAACAAAACAGAAAAAACGGATACAACAAAAGAAAATAAACCTG AAGAAAAAAAATCTGAAGACAAGAAAACGGAAGATACCGCTACTAGCTCCAGCGATTATTCTAAACTTATTTCCTATATG GAAAAAGAAACAGGCGGAAAAACAAAAGTTCTTTTTGAAAATAAGGAACCACAAGTCTATAAATCTGAAGATGTTTCAGT ATCGATGAACAGTTATACATTAGTTGAATTAAATGGATTCCATACGGACTTTAATATTCCATTTAACCGTCAAACAGAGG GCGGAGTTATTCTTGTGAACTATAGCGTAAAAAATAGTTCAGCTAAAGATATTTATTATATGCCAGCATTGGACATATCG TTTACTGGTGCGCAGAAAGTATATAGTAACTATAAAGATTTAATTCCAAAAGAAGATCAACTGCCAACTAAGCTTGCTCC AACGAATGATTACTTAGTAAAAGCAGGAGAAACTATTTCTGGTTATATCGCGTATCCATTTGGAAAAGATGATCTAGCAA AAATTTCAAGTCTCTCAACAGTCTCAGTCACAGTCCCAACTGCACAAGCTAATAAAGGAAAATTCGATGCTCCAATCGGC AGTCCCGGAAGCTTTTCATTAAGTTTAAACAAACAAGGTGCTGAAAAGGTTGCAACAGATAAAGCTTTCTACCAAGATAA AGCTACAGCTAATAACATGGGCGATAAAAAAATGTTAAAAGAGAAATCAAGTATTAATAACAGCCAAGAATTAGGCGCTG TTAATGTTACATTAGATGGATACCAATTTACTCAATTCACACCAAATTCCGTCGAAGCACCGCGCTTTGCAAATTTCAAA AACGGTATTGTTCTATTAACGGTGAAATTCAAGCTTGATAACAAAGATACTCAAGATGTTTCACTATCTCCTATAAGCTC TACATTGAGAGTGAATGATGGTACACAATATACGATTAATGAAGGGATGCTACTAAATTACGACTATAACGCTTTAGTCA AAACGGGAACATCTGGAGAGTTACTGCAAGTATTTATTTTAGATCAAGAGCAGTATGAGAAGATTTGGAAGGAAAAAAGC TTCGAGATTGAGTTAGGACCTATGAGAAATAAAGAAGCTAAAGATATTTCACAAGGTAAAAAAGCTAAGTTTACATTACC TAAATAA
Upstream 100 bases:
>100_bases ATAATTAGAAAAAAACACTGGTAAATATTGACTAGCCTTCTTATAATAAAACGTGGGGCTAATGTGAGAGTTTAGTTTTA TACAAATAGGGGGAAGAAAC
Downstream 100 bases:
>100_bases ATTACTAAATATATAATAGAAAAGGCATATAACATATGATTGTTATATGCCTTTTTTATTTGTATCAAGAACAAAACTTT AATTTAAGTGTATACATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEKKSEDKKTEDTATSSSDYSKLISYM EKETGGKTKVLFENKEPQVYKSEDVSVSMNSYTLVELNGFHTDFNIPFNRQTEGGVILVNYSVKNSSAKDIYYMPALDIS FTGAQKVYSNYKDLIPKEDQLPTKLAPTNDYLVKAGETISGYIAYPFGKDDLAKISSLSTVSVTVPTAQANKGKFDAPIG SPGSFSLSLNKQGAEKVATDKAFYQDKATANNMGDKKMLKEKSSINNSQELGAVNVTLDGYQFTQFTPNSVEAPRFANFK NGIVLLTVKFKLDNKDTQDVSLSPISSTLRVNDGTQYTINEGMLLNYDYNALVKTGTSGELLQVFILDQEQYEKIWKEKS FEIELGPMRNKEAKDISQGKKAKFTLPK
Sequences:
>Translated_428_residues MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEKKSEDKKTEDTATSSSDYSKLISYM EKETGGKTKVLFENKEPQVYKSEDVSVSMNSYTLVELNGFHTDFNIPFNRQTEGGVILVNYSVKNSSAKDIYYMPALDIS FTGAQKVYSNYKDLIPKEDQLPTKLAPTNDYLVKAGETISGYIAYPFGKDDLAKISSLSTVSVTVPTAQANKGKFDAPIG SPGSFSLSLNKQGAEKVATDKAFYQDKATANNMGDKKMLKEKSSINNSQELGAVNVTLDGYQFTQFTPNSVEAPRFANFK NGIVLLTVKFKLDNKDTQDVSLSPISSTLRVNDGTQYTINEGMLLNYDYNALVKTGTSGELLQVFILDQEQYEKIWKEKS FEIELGPMRNKEAKDISQGKKAKFTLPK >Mature_427_residues SKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEKKSEDKKTEDTATSSSDYSKLISYME KETGGKTKVLFENKEPQVYKSEDVSVSMNSYTLVELNGFHTDFNIPFNRQTEGGVILVNYSVKNSSAKDIYYMPALDISF TGAQKVYSNYKDLIPKEDQLPTKLAPTNDYLVKAGETISGYIAYPFGKDDLAKISSLSTVSVTVPTAQANKGKFDAPIGS PGSFSLSLNKQGAEKVATDKAFYQDKATANNMGDKKMLKEKSSINNSQELGAVNVTLDGYQFTQFTPNSVEAPRFANFKN GIVLLTVKFKLDNKDTQDVSLSPISSTLRVNDGTQYTINEGMLLNYDYNALVKTGTSGELLQVFILDQEQYEKIWKEKSF EIELGPMRNKEAKDISQGKKAKFTLPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47408; Mature: 47277
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEKKSED CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH KKTEDTATSSSDYSKLISYMEKETGGKTKVLFENKEPQVYKSEDVSVSMNSYTLVELNGF CCCHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCEEEECCEEEEEEECC HTDFNIPFNRQTEGGVILVNYSVKNSSAKDIYYMPALDISFTGAQKVYSNYKDLIPKEDQ EEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEECEECEEECCHHHHHHHHHHHCCCCCC LPTKLAPTNDYLVKAGETISGYIAYPFGKDDLAKISSLSTVSVTVPTAQANKGKFDAPIG CCCEECCCCCEEEECCCCEEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC SPGSFSLSLNKQGAEKVATDKAFYQDKATANNMGDKKMLKEKSSINNSQELGAVNVTLDG CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHCCEEEEEECC YQFTQFTPNSVEAPRFANFKNGIVLLTVKFKLDNKDTQDVSLSPISSTLRVNDGTQYTIN EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCEEEEECCCCEEEEC EGMLLNYDYNALVKTGTSGELLQVFILDQEQYEKIWKEKSFEIELGPMRNKEAKDISQGK CCEEEEECCCEEEEECCCCCEEEEEEECHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCC KAKFTLPK CCEEECCC >Mature Secondary Structure SKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEKKSED CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH KKTEDTATSSSDYSKLISYMEKETGGKTKVLFENKEPQVYKSEDVSVSMNSYTLVELNGF CCCHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCEEEECCEEEEEEECC HTDFNIPFNRQTEGGVILVNYSVKNSSAKDIYYMPALDISFTGAQKVYSNYKDLIPKEDQ EEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEECEECEEECCHHHHHHHHHHHCCCCCC LPTKLAPTNDYLVKAGETISGYIAYPFGKDDLAKISSLSTVSVTVPTAQANKGKFDAPIG CCCEECCCCCEEEECCCCEEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC SPGSFSLSLNKQGAEKVATDKAFYQDKATANNMGDKKMLKEKSSINNSQELGAVNVTLDG CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHCCEEEEEECC YQFTQFTPNSVEAPRFANFKNGIVLLTVKFKLDNKDTQDVSLSPISSTLRVNDGTQYTIN EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCEEEEECCCCEEEEC EGMLLNYDYNALVKTGTSGELLQVFILDQEQYEKIWKEKSFEIELGPMRNKEAKDISQGK CCEEEEECCCEEEEECCCCCEEEEEEECHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCC KAKFTLPK CCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA