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The map label for this gene is rbsK [H]

Identifier: 117921914

GI number: 117921914

Start: 4171135

End: 4172046

Strand: Direct

Name: rbsK [H]

Synonym: Shewana3_3477

Alternate gene names: 117921914

Gene position: 4171135-4172046 (Clockwise)

Preceding gene: 117921913

Following gene: 117921915

Centisome position: 83.89

GC content: 54.28

Gene sequence:

>912_bases
ATGAGCCACATACTCGTTATAGGCAGTGCCAACGCCGATCATGTTATGAATTTTGAGTATTTGCCCGTTCCCGGCCAAAC
CTTAATGAGCCGAGCCTATCGCTTGGAACACGGTGGCAAAGGAGCCAATCAGGCGGTAGCCTGTGCCCGTTTATGCCAAG
GGGATGCGGAAGTGGCATTTATCTGCCATCTCGGCCAAGACAGTGTCGGCAATGACATGCGTACAAGCTGGCTCAAGGAT
GGCATTAAGGCCGAAGGTATTACCCAAGTCGCCAATATGAGTACGGGCACGGCGCTGATTTTTGTCGGCGATAATGGGGA
GAACTCCATCGGGATCGCCGCGGGCGCCAATGCCGATCTCACCCCAAGCGAGTTAGAGAAGCATTACGCCCTGTTTGCCA
ATGCCCAATTCTTACTGATCCAGCTCGAAACGCCGATGGAGACGGTTCACCACGCATTGCAAACCGCCAAGCGCCTCGGT
ATTACCACAGTGCTGAATCCTGCGCCTGCAACCAGTCAGGAGTTGGATTACCTCAAATGGGTCGACATCATTACTCCCAA
TGAGACCGAGGCCGAAGCACTTACAGGCATTGAGGTCAATAACGAAGAAGATGCCGAGCTTGCCGCCCAATGGCTACATC
AGCAGGGCGTTGCAACTGTCGTCATAACCTTAGGCAGTAAAGGCGCGTTTATCAGCAGTGCCGGTTTTACCGGGTTAATT
CCGGCGCTGACAGTGCAAGCCATAGATACGGTTGCCGCGGGCGATACCTTTAATGGCGCCTTAGTGGTGGGTTTAAGTGA
AGGGATGTCAATTGCAGCGGCCGTCGGGTTTGCCAATGCCGCCTCTGCCATTACCGTTACCCGAGAAGGCGCCCAGCGCG
CGATTCCCTATCGCCACGAAGTCCAACGTTAA

Upstream 100 bases:

>100_bases
CGGCATTGATAGACAGGGCTTTGTTGACTTGTTAGTTGACAGTTTAGCGGTCTACACACCAACCTATCTCAATCGCAGAT
GAACTTAAGGTAACGCTTCC

Downstream 100 bases:

>100_bases
CCCATGAGTGCGGCAAGTTGTCGCACTCGACCTCTTTCATTCAAAAGTACTATATACATAATTTACATACCGAATTCATT
CCCATTTAATGAATTCAGCC

Product: ribokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSHILVIGSANADHVMNFEYLPVPGQTLMSRAYRLEHGGKGANQAVACARLCQGDAEVAFICHLGQDSVGNDMRTSWLKD
GIKAEGITQVANMSTGTALIFVGDNGENSIGIAAGANADLTPSELEKHYALFANAQFLLIQLETPMETVHHALQTAKRLG
ITTVLNPAPATSQELDYLKWVDIITPNETEAEALTGIEVNNEEDAELAAQWLHQQGVATVVITLGSKGAFISSAGFTGLI
PALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVGFANAASAITVTREGAQRAIPYRHEVQR

Sequences:

>Translated_303_residues
MSHILVIGSANADHVMNFEYLPVPGQTLMSRAYRLEHGGKGANQAVACARLCQGDAEVAFICHLGQDSVGNDMRTSWLKD
GIKAEGITQVANMSTGTALIFVGDNGENSIGIAAGANADLTPSELEKHYALFANAQFLLIQLETPMETVHHALQTAKRLG
ITTVLNPAPATSQELDYLKWVDIITPNETEAEALTGIEVNNEEDAELAAQWLHQQGVATVVITLGSKGAFISSAGFTGLI
PALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVGFANAASAITVTREGAQRAIPYRHEVQR
>Mature_302_residues
SHILVIGSANADHVMNFEYLPVPGQTLMSRAYRLEHGGKGANQAVACARLCQGDAEVAFICHLGQDSVGNDMRTSWLKDG
IKAEGITQVANMSTGTALIFVGDNGENSIGIAAGANADLTPSELEKHYALFANAQFLLIQLETPMETVHHALQTAKRLGI
TTVLNPAPATSQELDYLKWVDIITPNETEAEALTGIEVNNEEDAELAAQWLHQQGVATVVITLGSKGAFISSAGFTGLIP
ALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVGFANAASAITVTREGAQRAIPYRHEVQR

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=300, Percent_Identity=36.3333333333333, Blast_Score=162, Evalue=4e-40,
Organism=Escherichia coli, GI1790193, Length=298, Percent_Identity=49.6644295302013, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI87081971, Length=318, Percent_Identity=27.3584905660377, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788491, Length=290, Percent_Identity=24.4827586206897, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082343, Length=299, Percent_Identity=27.7591973244147, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788417, Length=304, Percent_Identity=25.3289473684211, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17532905, Length=303, Percent_Identity=34.983498349835, Blast_Score=158, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6319884, Length=337, Percent_Identity=27.5964391691395, Blast_Score=114, Evalue=1e-26,
Organism=Drosophila melanogaster, GI20128807, Length=308, Percent_Identity=35.7142857142857, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24583886, Length=301, Percent_Identity=29.9003322259136, Blast_Score=106, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 31880; Mature: 31749

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHILVIGSANADHVMNFEYLPVPGQTLMSRAYRLEHGGKGANQAVACARLCQGDAEVAF
CCEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEE
ICHLGQDSVGNDMRTSWLKDGIKAEGITQVANMSTGTALIFVGDNGENSIGIAAGANADL
EEECCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCC
TPSELEKHYALFANAQFLLIQLETPMETVHHALQTAKRLGITTVLNPAPATSQELDYLKW
CHHHHHHHHEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCEEE
VDIITPNETEAEALTGIEVNNEEDAELAAQWLHQQGVATVVITLGSKGAFISSAGFTGLI
EEEECCCCCCHHHEECEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCHHH
PALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVGFANAASAITVTREGAQRAIPYRHE
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEHHHCCCCCCCEEEEECCCHHHCCCCHHH
VQR
CCC
>Mature Secondary Structure 
SHILVIGSANADHVMNFEYLPVPGQTLMSRAYRLEHGGKGANQAVACARLCQGDAEVAF
CEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEE
ICHLGQDSVGNDMRTSWLKDGIKAEGITQVANMSTGTALIFVGDNGENSIGIAAGANADL
EEECCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCC
TPSELEKHYALFANAQFLLIQLETPMETVHHALQTAKRLGITTVLNPAPATSQELDYLKW
CHHHHHHHHEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCEEE
VDIITPNETEAEALTGIEVNNEEDAELAAQWLHQQGVATVVITLGSKGAFISSAGFTGLI
EEEECCCCCCHHHEECEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCHHH
PALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVGFANAASAITVTREGAQRAIPYRHE
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEHHHCCCCCCCEEEEECCCHHHCCCCHHH
VQR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]