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The map label for this gene is fyuA [H]

Identifier: 117921895

GI number: 117921895

Start: 4143817

End: 4146093

Strand: Direct

Name: fyuA [H]

Synonym: Shewana3_3458

Alternate gene names: 117921895

Gene position: 4143817-4146093 (Clockwise)

Preceding gene: 117921894

Following gene: 117921896

Centisome position: 83.34

GC content: 48.97

Gene sequence:

>2277_bases
ATGAAACAGAATACTATCAAAATGAGTTGCATTGCTTTAGCTATCTCATCTGCATTGGCAGCACAATATGCTGTTGCCGA
GGATGAAAATAGCACCGGGGAGAAGCAAGCTACCTTAGAACGCATTGAAGTCACCGCTCGTAAGTCCATTGAGAGCCTGC
AAAACGTACCAGTTGCAGTGACCTCGGTCAGTGCTGACGATTTGGCGGAAAATGGCATCAGTGTGATGACTGAAATCCAG
CAATTTTCACCCAACACTACGCTGCAATCCAGTCGCGGCACTAACTCTACCCTCACGGCCTTTATTCGCGGTGTCGGCCA
GGAAGATCCGCTCTGGGGCTATGAGCCCGGCGTCGGTATCTATATCGACGATGTGTATATCGCCCGCCCACAGGGCGCGG
TGCTCGATATCCTCGATGTGCAACGTATCGAAGTACTGCGTGGCCCACAGGGCACCCTCTATGGTAAAAATACCATCGGC
GGCGCGGTCAAATACGTGACCAAGAAGATGAGCGGTGACGCTGAGTTAAACCTCAATGCCACCATCGGCAGCTACAACCA
GCAAGACTACAAGATAGCAGGTCAATTACCTTTAATTGATAACAAGCTGTATATTGGTGGCGCCTTCGCAAGCTTAAATC
GCGATGGTTATGGTGATTTCATCACCTCAGCATTACCAGACCAAGACACTGAAAACTATAACAAAGATGTTATGGCAGGG
CGTGTGAGCTTAGAATACACGCCAACCGACGATCTGTTTATGCGCCTCAACTACGACAAAACCACAGATGAGTCGAATTC
AAAGGGGGGCTACCGCATGCTCCCCAGTGTCCTGACCGATGCCCCTGTACCAGACAGCAAATACGACTCTTACACCAGTA
TGCCAACCTGGAACAAAGTGGAAACCGAAGGTTGGGGGCTGACCATTGAATACGGCTTGAACGATGATTGGACACTGAAA
TCCGTGACCTCATCCCGCGAGAGCTATTCGCCCACCAACATCGACTTTGACAACACCAGCCTGCGTATTTTGGACGTTCC
AGCCATCTACGATGACGAACAATTTAGTCAGGAATTCCAAGCTAACTACGACGGCGATAACTTGAAACTCGTCTCAGGCC
TTTATTACTTTAAAGGCGATTCCTGCGGGATGTTCGATTCCATCCTGTATGAATATTACAAAGCCTACGGTGGTCTCACT
CGTGAAGTTCGTGGTTGCAACAACAGTGAAAGCTATGCCGCCTACGCTCAGGGCTCTTACGACATCACTGATAAATTGTC
GATGACCGCAGGTTTGCGTTATACCCGCGAAACGAAGGATGCCACTGTCTATAACGGCATCATGTTTACGACGCTTTATC
CCGAAACTGGCTGGATCCCAGGATATGTTCGCGATGAAGATGCCATCAACGCCAGTATTCCTAAGGTGTTAGATGATGAA
GAAACCTGGTCGAAACTCAATCCACGCTTAGGTTTAGAGTACCAACTCAGCGACGATATGATGCTCTTTACCAGCTATTC
ACAGGGCTTCAAGTCGGGCACCTTTAACCCAAGGGCAACGGGTCCAGAACCCGCAGTAGACCCAGAAGTCGTTGATTCCT
ATGAGCTGGGTATGAAGAGTGAATGGTTTGACAGGCTGCGAGTTAACGCAACCGCCTTCTACTTAGACCATAAAGACAGA
CAGTTCGTGACCGTATTACCCGGTGAAAACGCGTCCGATCTTAACCAACGTCTAGGCAACATTGGTAAATCGACCGCCAC
GGGTCTAGAACTCGAAGTGGAATACGCCGCGACTGAGTCATTAAATCTGTTCGCGACTCTGGGCTTAATCGATGCCAGCT
TCGAGGAAGTAATCTCCTACGATAGCGATGGAAACCGCATCGATATCAGCGACACTTACACTATCACCAACACCCCAGAT
ACCACGGCAAACGTTGGATTTAGCTACAATATCGACACGGATATCGGCAGCTTTGTGGCCAACGGTAACTACTACTATCG
CAGCGACTACGACTTAGCCGTAGTAAATAACCTGCTGAGCCAAGACGGTTATGGCCTGCTAAACCTCGGCTTGAACTGGT
ATAGCAACGACGGTCACTGGCAAGCGGGTCTGCATTGGAAAAACGTCACTAACGAAGAATATCTGGTCGGTAACTACGCC
TTCGTCACCCCAGATGGTAATGGCGGATATATTCCAGGTTTAGGCGGTGACAATACATTAATTGGTTATTATGGCGATCC
AGAGACTATCTCTCTCACCGTTGGCTATAATTTCTAG

Upstream 100 bases:

>100_bases
CGATTTAAATTTTAAATAATTACTATAGAGTCAATGTGAATCAGAAAAATAGTAGTAAGTACCAACCTTTAAAAAATAAA
TACTACAACGGGAAATCTGT

Downstream 100 bases:

>100_bases
AATATAATGTTATTGACAAATAATAATAACCGACTCCCATGAGTCGGTTATTAATTTAACGGCTTTAAATATTATCTAGC
ATTAATTTCCAATAGGATTA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: IPR65; IRPC [H]

Number of amino acids: Translated: 758; Mature: 758

Protein sequence:

>758_residues
MKQNTIKMSCIALAISSALAAQYAVAEDENSTGEKQATLERIEVTARKSIESLQNVPVAVTSVSADDLAENGISVMTEIQ
QFSPNTTLQSSRGTNSTLTAFIRGVGQEDPLWGYEPGVGIYIDDVYIARPQGAVLDILDVQRIEVLRGPQGTLYGKNTIG
GAVKYVTKKMSGDAELNLNATIGSYNQQDYKIAGQLPLIDNKLYIGGAFASLNRDGYGDFITSALPDQDTENYNKDVMAG
RVSLEYTPTDDLFMRLNYDKTTDESNSKGGYRMLPSVLTDAPVPDSKYDSYTSMPTWNKVETEGWGLTIEYGLNDDWTLK
SVTSSRESYSPTNIDFDNTSLRILDVPAIYDDEQFSQEFQANYDGDNLKLVSGLYYFKGDSCGMFDSILYEYYKAYGGLT
REVRGCNNSESYAAYAQGSYDITDKLSMTAGLRYTRETKDATVYNGIMFTTLYPETGWIPGYVRDEDAINASIPKVLDDE
ETWSKLNPRLGLEYQLSDDMMLFTSYSQGFKSGTFNPRATGPEPAVDPEVVDSYELGMKSEWFDRLRVNATAFYLDHKDR
QFVTVLPGENASDLNQRLGNIGKSTATGLELEVEYAATESLNLFATLGLIDASFEEVISYDSDGNRIDISDTYTITNTPD
TTANVGFSYNIDTDIGSFVANGNYYYRSDYDLAVVNNLLSQDGYGLLNLGLNWYSNDGHWQAGLHWKNVTNEEYLVGNYA
FVTPDGNGGYIPGLGGDNTLIGYYGDPETISLTVGYNF

Sequences:

>Translated_758_residues
MKQNTIKMSCIALAISSALAAQYAVAEDENSTGEKQATLERIEVTARKSIESLQNVPVAVTSVSADDLAENGISVMTEIQ
QFSPNTTLQSSRGTNSTLTAFIRGVGQEDPLWGYEPGVGIYIDDVYIARPQGAVLDILDVQRIEVLRGPQGTLYGKNTIG
GAVKYVTKKMSGDAELNLNATIGSYNQQDYKIAGQLPLIDNKLYIGGAFASLNRDGYGDFITSALPDQDTENYNKDVMAG
RVSLEYTPTDDLFMRLNYDKTTDESNSKGGYRMLPSVLTDAPVPDSKYDSYTSMPTWNKVETEGWGLTIEYGLNDDWTLK
SVTSSRESYSPTNIDFDNTSLRILDVPAIYDDEQFSQEFQANYDGDNLKLVSGLYYFKGDSCGMFDSILYEYYKAYGGLT
REVRGCNNSESYAAYAQGSYDITDKLSMTAGLRYTRETKDATVYNGIMFTTLYPETGWIPGYVRDEDAINASIPKVLDDE
ETWSKLNPRLGLEYQLSDDMMLFTSYSQGFKSGTFNPRATGPEPAVDPEVVDSYELGMKSEWFDRLRVNATAFYLDHKDR
QFVTVLPGENASDLNQRLGNIGKSTATGLELEVEYAATESLNLFATLGLIDASFEEVISYDSDGNRIDISDTYTITNTPD
TTANVGFSYNIDTDIGSFVANGNYYYRSDYDLAVVNNLLSQDGYGLLNLGLNWYSNDGHWQAGLHWKNVTNEEYLVGNYA
FVTPDGNGGYIPGLGGDNTLIGYYGDPETISLTVGYNF
>Mature_758_residues
MKQNTIKMSCIALAISSALAAQYAVAEDENSTGEKQATLERIEVTARKSIESLQNVPVAVTSVSADDLAENGISVMTEIQ
QFSPNTTLQSSRGTNSTLTAFIRGVGQEDPLWGYEPGVGIYIDDVYIARPQGAVLDILDVQRIEVLRGPQGTLYGKNTIG
GAVKYVTKKMSGDAELNLNATIGSYNQQDYKIAGQLPLIDNKLYIGGAFASLNRDGYGDFITSALPDQDTENYNKDVMAG
RVSLEYTPTDDLFMRLNYDKTTDESNSKGGYRMLPSVLTDAPVPDSKYDSYTSMPTWNKVETEGWGLTIEYGLNDDWTLK
SVTSSRESYSPTNIDFDNTSLRILDVPAIYDDEQFSQEFQANYDGDNLKLVSGLYYFKGDSCGMFDSILYEYYKAYGGLT
REVRGCNNSESYAAYAQGSYDITDKLSMTAGLRYTRETKDATVYNGIMFTTLYPETGWIPGYVRDEDAINASIPKVLDDE
ETWSKLNPRLGLEYQLSDDMMLFTSYSQGFKSGTFNPRATGPEPAVDPEVVDSYELGMKSEWFDRLRVNATAFYLDHKDR
QFVTVLPGENASDLNQRLGNIGKSTATGLELEVEYAATESLNLFATLGLIDASFEEVISYDSDGNRIDISDTYTITNTPD
TTANVGFSYNIDTDIGSFVANGNYYYRSDYDLAVVNNLLSQDGYGLLNLGLNWYSNDGHWQAGLHWKNVTNEEYLVGNYA
FVTPDGNGGYIPGLGGDNTLIGYYGDPETISLTVGYNF

Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 83834; Mature: 83834

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNTIKMSCIALAISSALAAQYAVAEDENSTGEKQATLERIEVTARKSIESLQNVPVAV
CCCCEEEHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
TSVSADDLAENGISVMTEIQQFSPNTTLQSSRGTNSTLTAFIRGVGQEDPLWGYEPGVGI
EECCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEE
YIDDVYIARPQGAVLDILDVQRIEVLRGPQGTLYGKNTIGGAVKYVTKKMSGDAELNLNA
EEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEE
TIGSYNQQDYKIAGQLPLIDNKLYIGGAFASLNRDGYGDFITSALPDQDTENYNKDVMAG
EECCCCCCCEEEEECCEEECCEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCEEEE
RVSLEYTPTDDLFMRLNYDKTTDESNSKGGYRMLPSVLTDAPVPDSKYDSYTSMPTWNKV
EEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCCCCCCE
ETEGWGLTIEYGLNDDWTLKSVTSSRESYSPTNIDFDNTSLRILDVPAIYDDEQFSQEFQ
ECCCCEEEEEECCCCCCEEHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHC
ANYDGDNLKLVSGLYYFKGDSCGMFDSILYEYYKAYGGLTREVRGCNNSESYAAYAQGSY
CCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECCCC
DITDKLSMTAGLRYTRETKDATVYNGIMFTTLYPETGWIPGYVRDEDAINASIPKVLDDE
CCHHHHHHHHCCEEECCCCCCEEECCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCC
ETWSKLNPRLGLEYQLSDDMMLFTSYSQGFKSGTFNPRATGPEPAVDPEVVDSYELGMKS
HHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCHHHCCCCH
EWFDRLRVNATAFYLDHKDRQFVTVLPGENASDLNQRLGNIGKSTATGLELEVEYAATES
HHHHHHEEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCC
LNLFATLGLIDASFEEVISYDSDGNRIDISDTYTITNTPDTTANVGFSYNIDTDIGSFVA
CEEEEEEEHHHCCHHHHHCCCCCCCEEECCCEEEEECCCCCCEECCEEEEECCCCHHHEE
NGNYYYRSDYDLAVVNNLLSQDGYGLLNLGLNWYSNDGHWQAGLHWKNVTNEEYLVGNYA
CCEEEEECCCCHHHHHHHHHCCCCEEEEECEEEECCCCCEEECEEECCCCCCCEEEEEEE
FVTPDGNGGYIPGLGGDNTLIGYYGDPETISLTVGYNF
EEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCC
>Mature Secondary Structure
MKQNTIKMSCIALAISSALAAQYAVAEDENSTGEKQATLERIEVTARKSIESLQNVPVAV
CCCCEEEHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
TSVSADDLAENGISVMTEIQQFSPNTTLQSSRGTNSTLTAFIRGVGQEDPLWGYEPGVGI
EECCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEE
YIDDVYIARPQGAVLDILDVQRIEVLRGPQGTLYGKNTIGGAVKYVTKKMSGDAELNLNA
EEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEE
TIGSYNQQDYKIAGQLPLIDNKLYIGGAFASLNRDGYGDFITSALPDQDTENYNKDVMAG
EECCCCCCCEEEEECCEEECCEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCEEEE
RVSLEYTPTDDLFMRLNYDKTTDESNSKGGYRMLPSVLTDAPVPDSKYDSYTSMPTWNKV
EEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCCCCCCE
ETEGWGLTIEYGLNDDWTLKSVTSSRESYSPTNIDFDNTSLRILDVPAIYDDEQFSQEFQ
ECCCCEEEEEECCCCCCEEHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHC
ANYDGDNLKLVSGLYYFKGDSCGMFDSILYEYYKAYGGLTREVRGCNNSESYAAYAQGSY
CCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEECCCC
DITDKLSMTAGLRYTRETKDATVYNGIMFTTLYPETGWIPGYVRDEDAINASIPKVLDDE
CCHHHHHHHHCCEEECCCCCCEEECCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCC
ETWSKLNPRLGLEYQLSDDMMLFTSYSQGFKSGTFNPRATGPEPAVDPEVVDSYELGMKS
HHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCHHHCCCCH
EWFDRLRVNATAFYLDHKDRQFVTVLPGENASDLNQRLGNIGKSTATGLELEVEYAATES
HHHHHHEEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCC
LNLFATLGLIDASFEEVISYDSDGNRIDISDTYTITNTPDTTANVGFSYNIDTDIGSFVA
CEEEEEEEHHHCCHHHHHCCCCCCCEEECCCEEEEECCCCCCEECCEEEEECCCCHHHEE
NGNYYYRSDYDLAVVNNLLSQDGYGLLNLGLNWYSNDGHWQAGLHWKNVTNEEYLVGNYA
CCEEEEECCCCHHHHHHHHHCCCCEEEEECEEEECCCCCEEECEEECCCCCCCEEEEEEE
FVTPDGNGGYIPGLGGDNTLIGYYGDPETISLTVGYNF
EEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA