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The map label for this gene is napH [H]

Identifier: 117921869

GI number: 117921869

Start: 4109103

End: 4110086

Strand: Direct

Name: napH [H]

Synonym: Shewana3_3432

Alternate gene names: 117921869

Gene position: 4109103-4110086 (Clockwise)

Preceding gene: 117921868

Following gene: 117921870

Centisome position: 82.64

GC content: 51.02

Gene sequence:

>984_bases
ATGAGTAACAAGTCTATGAATAACCAGACCATGAACTCAAAAGCCCGCATGCAAGGCGAGCATGCCGCAGCCATTGCAGA
ACTCGGTTGGTTTGGCGCACACAAATATTTGCTACTACGCCGCGCGGTGCAATTCGGCTTATTAGGCTTATTTGCACTTG
GGCCATTACTGGGAATTTGGCTATTTAAGGGTAATTTATCGGCCAGTTTACTGCTCGATACCATTCCCTTTGCCGATCCA
CTGGTGAGCTTACAAATGCTCATTAGCGGGCATATTCCCGAGCTTAGCCTACTGATAGGCGCCGCCTTGGTCATACTGTT
TTATGCCCTCGCCGGTGGACGGGTGTTTTGCAGTTGGGTGTGTCCGGTCAATCTGGTAACTGACACCGCAAGCTGGCTCA
GACGTAAATTGAACCTTCCTCGCAGCAGCGAGTTACCACGCAATTTACGTTATTACCTGCTGGCACTCGCGCTGTTATTG
CCATTGCTCACGGGCAACTTGATTTGGGAATGGATTAACCCAGTACCTTTAGTCTATCGCGCCGTGCTATTTGGCAGTCT
CAGTGGTTTATGGATCTTAGCGGCGATATTTCTGCTGGATCTGTTTATCGCCGAGCGCGCTTGGTGTGGTCACCTGTGCC
CAACAGGCGCCCTGTTTGGCTTAATCGGTAAATGGAGCCCCATCAAAATCGTTGCCAGCAAAGCCAGTGCCTGTGATAAC
TGCATGGACTGCTTTGCCGTTTGCCCTGAACGCCAAGTATTAAAGCCGGCGTTAAAAGGGCAAAACCCGGTGATCACTAG
CCCAGACTGCACCCAATGCGGCCGCTGTATCGACGTCTGCGCACAACGCGTATTTCGCTATCAAACACGCTTTACGGCCA
CTCAGGCTCAACTTAGCAAAGGCGATTCGACCGATTGTCAGTCGCTATCAACCACTTCACCAATTCGTCAACACATTGCC
CCCAAGGCGGAGAATGACCAATGA

Upstream 100 bases:

>100_bases
TGTTACCGACCACTCTGGCGCTCGGTAAAGCGGCTGCGCATGACACTTATATCAACACCGAGGAAACCACCTTAGAGATG
TTGAATAAGGGGCTAACGCT

Downstream 100 bases:

>100_bases
AAAAAATACTCACCTTAGCTGCGATTGTATTAGCCATCGGCGGCTGCTCAGGCCAACAAGCAGACTCTCAAACCACACCC
GTAAACATCAAATCCCTCGC

Product: quinol dehydrogenase membrane component

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSNKSMNNQTMNSKARMQGEHAAAIAELGWFGAHKYLLLRRAVQFGLLGLFALGPLLGIWLFKGNLSASLLLDTIPFADP
LVSLQMLISGHIPELSLLIGAALVILFYALAGGRVFCSWVCPVNLVTDTASWLRRKLNLPRSSELPRNLRYYLLALALLL
PLLTGNLIWEWINPVPLVYRAVLFGSLSGLWILAAIFLLDLFIAERAWCGHLCPTGALFGLIGKWSPIKIVASKASACDN
CMDCFAVCPERQVLKPALKGQNPVITSPDCTQCGRCIDVCAQRVFRYQTRFTATQAQLSKGDSTDCQSLSTTSPIRQHIA
PKAENDQ

Sequences:

>Translated_327_residues
MSNKSMNNQTMNSKARMQGEHAAAIAELGWFGAHKYLLLRRAVQFGLLGLFALGPLLGIWLFKGNLSASLLLDTIPFADP
LVSLQMLISGHIPELSLLIGAALVILFYALAGGRVFCSWVCPVNLVTDTASWLRRKLNLPRSSELPRNLRYYLLALALLL
PLLTGNLIWEWINPVPLVYRAVLFGSLSGLWILAAIFLLDLFIAERAWCGHLCPTGALFGLIGKWSPIKIVASKASACDN
CMDCFAVCPERQVLKPALKGQNPVITSPDCTQCGRCIDVCAQRVFRYQTRFTATQAQLSKGDSTDCQSLSTTSPIRQHIA
PKAENDQ
>Mature_326_residues
SNKSMNNQTMNSKARMQGEHAAAIAELGWFGAHKYLLLRRAVQFGLLGLFALGPLLGIWLFKGNLSASLLLDTIPFADPL
VSLQMLISGHIPELSLLIGAALVILFYALAGGRVFCSWVCPVNLVTDTASWLRRKLNLPRSSELPRNLRYYLLALALLLP
LLTGNLIWEWINPVPLVYRAVLFGSLSGLWILAAIFLLDLFIAERAWCGHLCPTGALFGLIGKWSPIKIVASKASACDNC
MDCFAVCPERQVLKPALKGQNPVITSPDCTQCGRCIDVCAQRVFRYQTRFTATQAQLSKGDSTDCQSLSTTSPIRQHIAP
KAENDQ

Specific function: Involved in electron transfer [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788532, Length=285, Percent_Identity=49.1228070175439, Blast_Score=286, Evalue=1e-78,
Organism=Escherichia coli, GI1787226, Length=211, Percent_Identity=28.436018957346, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011886 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35931; Mature: 35800

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKSMNNQTMNSKARMQGEHAAAIAELGWFGAHKYLLLRRAVQFGLLGLFALGPLLGIW
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKGNLSASLLLDTIPFADPLVSLQMLISGHIPELSLLIGAALVILFYALAGGRVFCSWV
HHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC
CPVNLVTDTASWLRRKLNLPRSSELPRNLRYYLLALALLLPLLTGNLIWEWINPVPLVYR
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AVLFGSLSGLWILAAIFLLDLFIAERAWCGHLCPTGALFGLIGKWSPIKIVASKASACDN
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
CMDCFAVCPERQVLKPALKGQNPVITSPDCTQCGRCIDVCAQRVFRYQTRFTATQAQLSK
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDSTDCQSLSTTSPIRQHIAPKAENDQ
CCCCCHHHCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNKSMNNQTMNSKARMQGEHAAAIAELGWFGAHKYLLLRRAVQFGLLGLFALGPLLGIW
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKGNLSASLLLDTIPFADPLVSLQMLISGHIPELSLLIGAALVILFYALAGGRVFCSWV
HHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC
CPVNLVTDTASWLRRKLNLPRSSELPRNLRYYLLALALLLPLLTGNLIWEWINPVPLVYR
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AVLFGSLSGLWILAAIFLLDLFIAERAWCGHLCPTGALFGLIGKWSPIKIVASKASACDN
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
CMDCFAVCPERQVLKPALKGQNPVITSPDCTQCGRCIDVCAQRVFRYQTRFTATQAQLSK
HHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDSTDCQSLSTTSPIRQHIAPKAENDQ
CCCCCHHHCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]