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The map label for this gene is pvdQ [H]

Identifier: 117921804

GI number: 117921804

Start: 4036067

End: 4038634

Strand: Reverse

Name: pvdQ [H]

Synonym: Shewana3_3366

Alternate gene names: 117921804

Gene position: 4038634-4036067 (Counterclockwise)

Preceding gene: 117921807

Following gene: 117921803

Centisome position: 81.22

GC content: 52.61

Gene sequence:

>2568_bases
ATGAAATTCAACAAACTCATGATCGCGATGGGGATGGCCTGCGGCGTTATGCTCACAGGCTGTAACGACAGCGAAGATAG
CACTCAACCTACCGAACCTGAAACCCAGCTGCAAACCTTTGCCCCCAACGGCTTACTCAAAGCCAATATTCGTCGAACTA
CCTACGGTGTGCCCCATATCCAAGCCGATAACCTAGAAAGCTTAGGCTTTGGTAGCGGTTACGCGCAGGCGCAGGACAAC
CTCTGCGTGCTCGCCGATGGTTTTGTTAAGGCCAACTCTCAACGCTCTATGTACTTTGGCCCCCATGCGTCGATTGATTT
CACCACAGGGCAGCCCACCGCCGAAGACAATGGCAACTTAATCTCCGACTTTGCCTATAAAGCCTTAAAAATTCGTGAGC
AAGCCGAAGCCAAATGGCCGCAGTTTAGCGAGCGTTCACGTGCATTAATCCAAGGTTTTACGGCGGGTTATAACCAATAC
CTTGCCGATGTTGAAGCGGGTAAACAAACCGCCGAACCTTTCTGTGGCGGTCAGCCGTGGGTGAAGCCCATAGTGCCAGA
GGATGTGGTCACTTATCTGTTTTCCATCGCCCTATTACCCGGCGCGGCTAACTTCCTCGATTTGATTTTCTACGCCAACC
CAGGGGATGGGCAGGAGTACATGCCGCGCATCGTAGGGCCTGCGCCAAGCCAAGAGCAAACCGCGTTTGTCAGCGATATG
CAGTCTAAATTGCTTGCCCGTGCGGCGCGCATTACCACACCTGAGACCAATCCACGGGATTTAGGCTCTAACGGTTGGGG
TCTGGGTAAAGATAAGACCGAAAATGGTCGCGGCATGGTGCTGGGTAATCCGCATTTCCCACATACGGGCAACCTGCGCT
TCTGGCAATCGCACATTACTATTCCAGGCCAATTGGATATGATGGGCGGCTCGCTGGTTGGCATGCCAGGCCCTATCAAC
ATCGGGTTTAACAAAGACTTAGCTTGGACTCATACCTTCTCTACCGCAGAACATTTTGTGATGTATAACCTCGAGCTGGT
CTCGGGCGACAGATTGCAGTATCTGTTCGATGGTCAGCCGATGCCGATCAATAAAGAGACTGTTTCTATCCTTGTGAACG
CCGGCCCCGCAGGTATGTTAGTGGCAGAAAAGGATATTTACACCACAGCAAAAGGACCTATGGTCGAGGCGCCGCCTTCG
CTCGCACCTTTTGGTTGGGACGATGGCAGTGCCTTTATGATCCAAGATGCGAACATGGCGACTATGGATCCCGTCGATCA
TTGGCTCGCCATGAACTTAGCGACCAATAAAGACGAATTCCAACAAGCCTTTAAAGACTACGACGGGGTGATTTTCAACA
ACACAATGTATGCCGATAAAGAGGGCAATGCCTTCTATATCGACGACTCGACCGTGCCCGGTTTATCCGAGGCCGCCGTG
GTAGTGCTAAAGACTTCGCCCGATATTAAGGCGGCAAAAGAGCAAGCTGGCTTTACCATTCTGCCGGGGAATACTTCGTT
ATTTAGCTTTAGTGGCCCCACGCCCTATGAGCGTGCGCCTAAGCTTGAGCGCAGCGACTTTGTGCAAAACTCCAATGACT
CCTTCTGGTCTACCAACTTAAATGAGCCACTGACGTACTTCTCGCCCATGTATGGTCCAGAAGCAGGGCAATTATCGCTG
CGTACCCGTATGGGCTTAACCCTGATGCAGGATGCGGCGGGCAGTGATGGCAAGTTCAATCTGGAAGAGTTAGAAGCCGC
GGTATTGTCGAATCGCAGTTATTTAGCTGAGTTGGTATTGCCGGACTTGATTGCCCAATGTGAGGCGCAGGGCAGTACGC
CTGTGGTGGTATCTGCGAGTTTGTCTAAGGATCTCACCTCAGCCTGTGCGGCGCTCAAAGCCTGGAACGGTAAGCAAGAT
AACGACAGTAAAGGCGGCGCCTTACTGCGTGAGTTTGCCCATCAGTTCAGCCAAAAAACCATGTTGACCAAGGGATTCGA
CCCCGCGAATGCGGCGACCACGCCTAATACGCTTACCACAGACGGTAGTGCATTAGTGGCGCTTGCCCATGCGGCCTTGA
ATCTTGAAGCCGCAGGTTTTGCCTTAGATGCACCGTTAGGTGATGTGCAGTTTGTCGAGAAGTCACTCCCCGATGGCACT
GCCAGCGGCGCGCGTTTACCTTGGCCGGGCAGCCATAACGCGGAAGGGGGATTCAACGTGTTCTCTACGAGCTTATCGGG
AGATGACACTCTGATCCCGCAGCATAAGTACGCGCCTTTGATGGACGTTGCTACGGGTAAGGCGATGGCCTCTGGCATGA
CGGCCAAGGGGTATCAGATACGTTATGGCTCAAGTTGGATGATGGCGGTCAGCTTTACCGATGAGGGCCCTGTCGCACGC
GGCATACTTACCTATTCGGAGTCGAGCAATATACTGTCGCCTTCCTTTACCGACCAGAGCAATCTGTATTCCAGCAGTAA
GACTTTCCGTCCATTACTGTTTAAGGAAGCCGATATCGCCCCTGCGGTGATTTCGACCACAGAACTGACGCTGCAAAAAG
CCCAGTAA

Upstream 100 bases:

>100_bases
CATCAGGAAGCGACATACGACTATTGCTCCTTCAGTCAATTAGCTGATTTAAGCAGTAAAGCTATGTCATTGAAGGAACT
AAAATTAAGAGATAATAATA

Downstream 100 bases:

>100_bases
TGGCTGAGTTGTCGTTAATCGATAGGCCCACTTAGGTGGGCCTTTTTTATTGGCTTTCTCTGGCGCAGCGCTTGCTGTTT
CAAAATGTAAAAATTTAACA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: AHL acylase pvdQ; Acyl-HSL acylase pvdQ; Acyl-HSL acylase pvdQ subunit alpha; Acyl-HSL acylase pvdQ subunit beta [H]

Number of amino acids: Translated: 855; Mature: 855

Protein sequence:

>855_residues
MKFNKLMIAMGMACGVMLTGCNDSEDSTQPTEPETQLQTFAPNGLLKANIRRTTYGVPHIQADNLESLGFGSGYAQAQDN
LCVLADGFVKANSQRSMYFGPHASIDFTTGQPTAEDNGNLISDFAYKALKIREQAEAKWPQFSERSRALIQGFTAGYNQY
LADVEAGKQTAEPFCGGQPWVKPIVPEDVVTYLFSIALLPGAANFLDLIFYANPGDGQEYMPRIVGPAPSQEQTAFVSDM
QSKLLARAARITTPETNPRDLGSNGWGLGKDKTENGRGMVLGNPHFPHTGNLRFWQSHITIPGQLDMMGGSLVGMPGPIN
IGFNKDLAWTHTFSTAEHFVMYNLELVSGDRLQYLFDGQPMPINKETVSILVNAGPAGMLVAEKDIYTTAKGPMVEAPPS
LAPFGWDDGSAFMIQDANMATMDPVDHWLAMNLATNKDEFQQAFKDYDGVIFNNTMYADKEGNAFYIDDSTVPGLSEAAV
VVLKTSPDIKAAKEQAGFTILPGNTSLFSFSGPTPYERAPKLERSDFVQNSNDSFWSTNLNEPLTYFSPMYGPEAGQLSL
RTRMGLTLMQDAAGSDGKFNLEELEAAVLSNRSYLAELVLPDLIAQCEAQGSTPVVVSASLSKDLTSACAALKAWNGKQD
NDSKGGALLREFAHQFSQKTMLTKGFDPANAATTPNTLTTDGSALVALAHAALNLEAAGFALDAPLGDVQFVEKSLPDGT
ASGARLPWPGSHNAEGGFNVFSTSLSGDDTLIPQHKYAPLMDVATGKAMASGMTAKGYQIRYGSSWMMAVSFTDEGPVAR
GILTYSESSNILSPSFTDQSNLYSSSKTFRPLLFKEADIAPAVISTTELTLQKAQ

Sequences:

>Translated_855_residues
MKFNKLMIAMGMACGVMLTGCNDSEDSTQPTEPETQLQTFAPNGLLKANIRRTTYGVPHIQADNLESLGFGSGYAQAQDN
LCVLADGFVKANSQRSMYFGPHASIDFTTGQPTAEDNGNLISDFAYKALKIREQAEAKWPQFSERSRALIQGFTAGYNQY
LADVEAGKQTAEPFCGGQPWVKPIVPEDVVTYLFSIALLPGAANFLDLIFYANPGDGQEYMPRIVGPAPSQEQTAFVSDM
QSKLLARAARITTPETNPRDLGSNGWGLGKDKTENGRGMVLGNPHFPHTGNLRFWQSHITIPGQLDMMGGSLVGMPGPIN
IGFNKDLAWTHTFSTAEHFVMYNLELVSGDRLQYLFDGQPMPINKETVSILVNAGPAGMLVAEKDIYTTAKGPMVEAPPS
LAPFGWDDGSAFMIQDANMATMDPVDHWLAMNLATNKDEFQQAFKDYDGVIFNNTMYADKEGNAFYIDDSTVPGLSEAAV
VVLKTSPDIKAAKEQAGFTILPGNTSLFSFSGPTPYERAPKLERSDFVQNSNDSFWSTNLNEPLTYFSPMYGPEAGQLSL
RTRMGLTLMQDAAGSDGKFNLEELEAAVLSNRSYLAELVLPDLIAQCEAQGSTPVVVSASLSKDLTSACAALKAWNGKQD
NDSKGGALLREFAHQFSQKTMLTKGFDPANAATTPNTLTTDGSALVALAHAALNLEAAGFALDAPLGDVQFVEKSLPDGT
ASGARLPWPGSHNAEGGFNVFSTSLSGDDTLIPQHKYAPLMDVATGKAMASGMTAKGYQIRYGSSWMMAVSFTDEGPVAR
GILTYSESSNILSPSFTDQSNLYSSSKTFRPLLFKEADIAPAVISTTELTLQKAQ
>Mature_855_residues
MKFNKLMIAMGMACGVMLTGCNDSEDSTQPTEPETQLQTFAPNGLLKANIRRTTYGVPHIQADNLESLGFGSGYAQAQDN
LCVLADGFVKANSQRSMYFGPHASIDFTTGQPTAEDNGNLISDFAYKALKIREQAEAKWPQFSERSRALIQGFTAGYNQY
LADVEAGKQTAEPFCGGQPWVKPIVPEDVVTYLFSIALLPGAANFLDLIFYANPGDGQEYMPRIVGPAPSQEQTAFVSDM
QSKLLARAARITTPETNPRDLGSNGWGLGKDKTENGRGMVLGNPHFPHTGNLRFWQSHITIPGQLDMMGGSLVGMPGPIN
IGFNKDLAWTHTFSTAEHFVMYNLELVSGDRLQYLFDGQPMPINKETVSILVNAGPAGMLVAEKDIYTTAKGPMVEAPPS
LAPFGWDDGSAFMIQDANMATMDPVDHWLAMNLATNKDEFQQAFKDYDGVIFNNTMYADKEGNAFYIDDSTVPGLSEAAV
VVLKTSPDIKAAKEQAGFTILPGNTSLFSFSGPTPYERAPKLERSDFVQNSNDSFWSTNLNEPLTYFSPMYGPEAGQLSL
RTRMGLTLMQDAAGSDGKFNLEELEAAVLSNRSYLAELVLPDLIAQCEAQGSTPVVVSASLSKDLTSACAALKAWNGKQD
NDSKGGALLREFAHQFSQKTMLTKGFDPANAATTPNTLTTDGSALVALAHAALNLEAAGFALDAPLGDVQFVEKSLPDGT
ASGARLPWPGSHNAEGGFNVFSTSLSGDDTLIPQHKYAPLMDVATGKAMASGMTAKGYQIRYGSSWMMAVSFTDEGPVAR
GILTYSESSNILSPSFTDQSNLYSSSKTFRPLLFKEADIAPAVISTTELTLQKAQ

Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of 11 to 14 carbons in length) [H

COG id: COG2366

COG function: function code R; Protein related to penicillin acylase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S45 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002692 [H]

Pfam domain/function: PF01804 Penicil_amidase [H]

EC number: =3.5.1.97 [H]

Molecular weight: Translated: 92191; Mature: 92191

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNKLMIAMGMACGVMLTGCNDSEDSTQPTEPETQLQTFAPNGLLKANIRRTTYGVPHI
CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEECCEEEECCCCCE
QADNLESLGFGSGYAQAQDNLCVLADGFVKANSQRSMYFGPHASIDFTTGQPTAEDNGNL
ECCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCEEECCCCEEEECCCCCCCCCCCCC
ISDFAYKALKIREQAEAKWPQFSERSRALIQGFTAGYNQYLADVEAGKQTAEPFCGGQPW
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
VKPIVPEDVVTYLFSIALLPGAANFLDLIFYANPGDGQEYMPRIVGPAPSQEQTAFVSDM
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHCCHHCCCCCCHHHHHHHHHH
QSKLLARAARITTPETNPRDLGSNGWGLGKDKTENGRGMVLGNPHFPHTGNLRFWQSHIT
HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEC
IPGQLDMMGGSLVGMPGPINIGFNKDLAWTHTFSTAEHFVMYNLELVSGDRLQYLFDGQP
CCCEEEECCCEEECCCCCEEECCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCC
MPINKETVSILVNAGPAGMLVAEKDIYTTAKGPMVEAPPSLAPFGWDDGSAFMIQDANMA
CCCCCCEEEEEEECCCCCEEEEECCEEECCCCCCEECCCCCCCCCCCCCCEEEEECCCCC
TMDPVDHWLAMNLATNKDEFQQAFKDYDGVIFNNTMYADKEGNAFYIDDSTVPGLSEAAV
CCCCHHHHEEEEECCCHHHHHHHHHHCCCEEECCEEEECCCCCEEEECCCCCCCCCCCEE
VVLKTSPDIKAAKEQAGFTILPGNTSLFSFSGPTPYERAPKLERSDFVQNSNDSFWSTNL
EEEECCCCHHHHHHHCCEEEECCCCEEEECCCCCCHHHCCCCCHHHHHCCCCCCEEECCC
NEPLTYFSPMYGPEAGQLSLRTRMGLTLMQDAAGSDGKFNLEELEAAVLSNRSYLAELVL
CCCHHHHCCCCCCCCCCEEEHHHCCCEEEHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
PDLIAQCEAQGSTPVVVSASLSKDLTSACAALKAWNGKQDNDSKGGALLREFAHQFSQKT
HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
MLTKGFDPANAATTPNTLTTDGSALVALAHAALNLEAAGFALDAPLGDVQFVEKSLPDGT
HHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCEEECCEEECCCCCHHHHHHHHCCCCC
ASGARLPWPGSHNAEGGFNVFSTSLSGDDTLIPQHKYAPLMDVATGKAMASGMTAKGYQI
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCEEE
RYGSSWMMAVSFTDEGPVARGILTYSESSNILSPSFTDQSNLYSSSKTFRPLLFKEADIA
EECCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCEEECCCCC
PAVISTTELTLQKAQ
CEEEEEEEEEEEECC
>Mature Secondary Structure
MKFNKLMIAMGMACGVMLTGCNDSEDSTQPTEPETQLQTFAPNGLLKANIRRTTYGVPHI
CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEECCEEEECCCCCE
QADNLESLGFGSGYAQAQDNLCVLADGFVKANSQRSMYFGPHASIDFTTGQPTAEDNGNL
ECCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCEEECCCCEEEECCCCCCCCCCCCC
ISDFAYKALKIREQAEAKWPQFSERSRALIQGFTAGYNQYLADVEAGKQTAEPFCGGQPW
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
VKPIVPEDVVTYLFSIALLPGAANFLDLIFYANPGDGQEYMPRIVGPAPSQEQTAFVSDM
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHCCHHCCCCCCHHHHHHHHHH
QSKLLARAARITTPETNPRDLGSNGWGLGKDKTENGRGMVLGNPHFPHTGNLRFWQSHIT
HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEC
IPGQLDMMGGSLVGMPGPINIGFNKDLAWTHTFSTAEHFVMYNLELVSGDRLQYLFDGQP
CCCEEEECCCEEECCCCCEEECCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCC
MPINKETVSILVNAGPAGMLVAEKDIYTTAKGPMVEAPPSLAPFGWDDGSAFMIQDANMA
CCCCCCEEEEEEECCCCCEEEEECCEEECCCCCCEECCCCCCCCCCCCCCEEEEECCCCC
TMDPVDHWLAMNLATNKDEFQQAFKDYDGVIFNNTMYADKEGNAFYIDDSTVPGLSEAAV
CCCCHHHHEEEEECCCHHHHHHHHHHCCCEEECCEEEECCCCCEEEECCCCCCCCCCCEE
VVLKTSPDIKAAKEQAGFTILPGNTSLFSFSGPTPYERAPKLERSDFVQNSNDSFWSTNL
EEEECCCCHHHHHHHCCEEEECCCCEEEECCCCCCHHHCCCCCHHHHHCCCCCCEEECCC
NEPLTYFSPMYGPEAGQLSLRTRMGLTLMQDAAGSDGKFNLEELEAAVLSNRSYLAELVL
CCCHHHHCCCCCCCCCCEEEHHHCCCEEEHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
PDLIAQCEAQGSTPVVVSASLSKDLTSACAALKAWNGKQDNDSKGGALLREFAHQFSQKT
HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
MLTKGFDPANAATTPNTLTTDGSALVALAHAALNLEAAGFALDAPLGDVQFVEKSLPDGT
HHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCEEECCEEECCCCCHHHHHHHHCCCCC
ASGARLPWPGSHNAEGGFNVFSTSLSGDDTLIPQHKYAPLMDVATGKAMASGMTAKGYQI
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCEEE
RYGSSWMMAVSFTDEGPVARGILTYSESSNILSPSFTDQSNLYSSSKTFRPLLFKEADIA
EECCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCEEECCCCC
PAVISTTELTLQKAQ
CEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA