BacMap

Definition	Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession	NC_008577
Length	4,972,204

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The map label for this gene is srmB [H]

Identifier: 117921774

GI number: 117921774

Start: 4001048

End: 4002307

Strand: Direct

Name: srmB [H]

Synonym: Shewana3_3336

Alternate gene names: 117921774

Gene position: 4001048-4002307 (Clockwise)

Preceding gene: 117921771

Following gene: 117921775

Centisome position: 80.47

GC content: 51.51

Gene sequence:

>1260_bases
ATGCAATTTGAAGATTTTCAGCTTGACCCTAGCTTATTAGAGTCACTTAAAGCCATGGGGCACCTGTCGCCCACCACCAT
CCAGCAAGAAACCCTGCCTCATGCCCTCGAGCAGCGGGATATTTTGGCGCGCGCCCCGACGGGTACAGGTAAAACCGCCA
GCTTCTTATTGCCAGCACTGCAACACTTAATCGACTTTCCCCGTCGCTATTCTGGCCATGCACGAATTTTGATCCTGACG
CCAACCCGTGAGTTAGCCAGCCAAATTCACCGTTATGCCTGCCACTTAGCCACAGGCCAAGGGCTGAATATCGCCATTAT
CACCGGCGGTGTGCCCTATGGTCCGCAGGAAGAAGCCCTAAAAGACAATATCGATATTCTGGTCGCGACGCCTGGCCGTC
TGATGGAATATTTAGATAAAGGCAAATTCAGCGCGGAATCGGTCGACATACTGATCATCGACGAAGCCGACCGCATGCTC
GATATGGGGTTCTCCGCCGTGGTGAAAGCCATTGCCCTCGAAGCCCAAGGTCGTAAGCAAAATATGCTGTTTTCGGCCAC
CCTCGAAGGCAGCGGCGTTATCCGTTTTGCCCGCGAAGTGCTTAACGATCCTATCGAAATCGATGTTGACGCACCGCGTA
AAGAGAAGGCCAAGATCCACCAATGGATCCACCTTGCCGACGATAAAGAACATAAGATTGCTCTGCTGTGCTATCTGCTC
AAGCAGGAAGACGTTAAACGCGCCATCGTATTCGTGAAGACTCGCGATGTGGTTTCTAGCCTAGAAGGCCAACTGCTTAA
AGCCGGTATTCCCTGCGCCTTTATGCGTGGCGATATGGAACAGAAGAAACGCTTCCAAGCCTTAAGCCGCTTTACCAAAG
GTGAAGTGAATGTGTTACTCGCGACCGATGTGGCCGCCCGTGGTATCGATATCGACGATATCAGCCATGTGATTAACTTC
GACATGCCACGTTCTGCCGATAGTTACATCCACCGTATTGGTCGTACTGGCCGCGCGGGGGCAAAAGGAACGGCAATTTC
ATTGGCCGAAGCCCACGATATGCGGATTGTCGGTAAGATTGAGCGTTATATCGAGCAGCCGCTTAAACGCCGCATCATCG
AGGAACTGCGTCCTAAACATAAAGAGGCGCGCGTGCCGACTAAGAAAAAGGCCAAAGTAAAAGCCAAGGAAGCCGCGAAG
CGAACCAGCAAAAAAGAAGCTGCTAAAAAGGCCAGTAAAATTGCACGTAAGAAGCAATAA

Upstream 100 bases:

>100_bases
GGCCAAACCGCGTAAAAGTAAAGCCTCTCCCGATTAAATTATTTAAGTTAACGGTTATAACCTTTATAATGCTTGGCTAT
TATTCGTCGAGACGCCGCGC

Downstream 100 bases:

>100_bases
CACAGCTACGAGAAAAGCCGCATAATGCGGCTTTTTTTATGGGCGGATGGCACAACGCTCTTGTGACTACGATGGAACTC
ACAACCGCCAAACCTCTCTA

Product: ATP-dependent RNA helicase SrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MQFEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQHLIDFPRRYSGHARILILT
PTRELASQIHRYACHLATGQGLNIAIITGGVPYGPQEEALKDNIDILVATPGRLMEYLDKGKFSAESVDILIIDEADRML
DMGFSAVVKAIALEAQGRKQNMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEKAKIHQWIHLADDKEHKIALLCYLL
KQEDVKRAIVFVKTRDVVSSLEGQLLKAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDISHVINF
DMPRSADSYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKIERYIEQPLKRRIIEELRPKHKEARVPTKKKAKVKAKEAAK
RTSKKEAAKKASKIARKKQ

Sequences:

>Translated_419_residues
MQFEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQHLIDFPRRYSGHARILILT
PTRELASQIHRYACHLATGQGLNIAIITGGVPYGPQEEALKDNIDILVATPGRLMEYLDKGKFSAESVDILIIDEADRML
DMGFSAVVKAIALEAQGRKQNMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEKAKIHQWIHLADDKEHKIALLCYLL
KQEDVKRAIVFVKTRDVVSSLEGQLLKAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDISHVINF
DMPRSADSYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKIERYIEQPLKRRIIEELRPKHKEARVPTKKKAKVKAKEAAK
RTSKKEAAKKASKIARKKQ
>Mature_419_residues
MQFEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQHLIDFPRRYSGHARILILT
PTRELASQIHRYACHLATGQGLNIAIITGGVPYGPQEEALKDNIDILVATPGRLMEYLDKGKFSAESVDILIIDEADRML
DMGFSAVVKAIALEAQGRKQNMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEKAKIHQWIHLADDKEHKIALLCYLL
KQEDVKRAIVFVKTRDVVSSLEGQLLKAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDISHVINF
DMPRSADSYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKIERYIEQPLKRRIIEELRPKHKEARVPTKKKAKVKAKEAAK
RTSKKEAAKKASKIARKKQ

Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI224593278, Length=376, Percent_Identity=37.2340425531915, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI222352149, Length=378, Percent_Identity=36.2433862433862, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=36.2397820163488, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=36.2397820163488, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI148613856, Length=349, Percent_Identity=36.1031518624642, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI38201710, Length=349, Percent_Identity=36.1031518624642, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=34.9726775956284, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI20149629, Length=367, Percent_Identity=35.9673024523161, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI301171467, Length=376, Percent_Identity=35.1063829787234, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI87196351, Length=376, Percent_Identity=35.1063829787234, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI169881239, Length=374, Percent_Identity=35.0267379679144, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI13514809, Length=374, Percent_Identity=35.0267379679144, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI301171475, Length=376, Percent_Identity=35.1063829787234, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI55749865, Length=363, Percent_Identity=33.3333333333333, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI31542656, Length=429, Percent_Identity=35.6643356643357, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI262118318, Length=378, Percent_Identity=34.9206349206349, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=34.5505617977528, Blast_Score=205, Evalue=7e-53,
Organism=Homo sapiens, GI164419743, Length=352, Percent_Identity=36.9318181818182, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI216548263, Length=378, Percent_Identity=34.9206349206349, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI262231852, Length=378, Percent_Identity=34.9206349206349, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI51094101, Length=352, Percent_Identity=36.9318181818182, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI13518015, Length=378, Percent_Identity=34.9206349206349, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI41327771, Length=398, Percent_Identity=33.1658291457286, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI7661920, Length=363, Percent_Identity=34.1597796143251, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=34.0782122905028, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=32.2493224932249, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI188035877, Length=370, Percent_Identity=34.3243243243243, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI41327776, Length=367, Percent_Identity=33.7874659400545, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI13514831, Length=353, Percent_Identity=33.9943342776204, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI8922886, Length=386, Percent_Identity=32.9015544041451, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI6005743, Length=386, Percent_Identity=32.3834196891192, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI50659095, Length=366, Percent_Identity=33.879781420765, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI21040371, Length=375, Percent_Identity=31.7333333333333, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI38569503, Length=373, Percent_Identity=32.171581769437, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=33.9572192513369, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI38569505, Length=373, Percent_Identity=32.171581769437, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI38327634, Length=367, Percent_Identity=33.7874659400545, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI83700235, Length=364, Percent_Identity=34.3406593406593, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI4758112, Length=372, Percent_Identity=31.989247311828, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI18375623, Length=372, Percent_Identity=31.989247311828, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI13129006, Length=385, Percent_Identity=32.987012987013, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI62241022, Length=364, Percent_Identity=32.1428571428571, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI17505907, Length=402, Percent_Identity=30.8457711442786, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=29.6758104738155, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI62241024, Length=386, Percent_Identity=31.8652849740933, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=31.5642458100559, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI164419732, Length=377, Percent_Identity=30.5039787798408, Blast_Score=158, Evalue=7e-39,
Organism=Homo sapiens, GI256223453, Length=375, Percent_Identity=28.8, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI154759257, Length=469, Percent_Identity=27.7185501066098, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=31.1526479750779, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI256773275, Length=406, Percent_Identity=32.2660098522167, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI4826686, Length=332, Percent_Identity=29.8192771084337, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI20336298, Length=358, Percent_Identity=29.0502793296089, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI1788930, Length=383, Percent_Identity=55.6135770234987, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=38.9473684210526, Blast_Score=275, Evalue=3e-75,
Organism=Escherichia coli, GI1790214, Length=368, Percent_Identity=38.8586956521739, Blast_Score=247, Evalue=9e-67,
Organism=Escherichia coli, GI87082221, Length=372, Percent_Identity=37.9032258064516, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI1787605, Length=397, Percent_Identity=36.272040302267, Blast_Score=212, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17555296, Length=360, Percent_Identity=37.7777777777778, Blast_Score=234, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI115533224, Length=332, Percent_Identity=39.1566265060241, Blast_Score=229, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17552642, Length=366, Percent_Identity=36.3387978142077, Blast_Score=224, Evalue=9e-59,
Organism=Caenorhabditis elegans, GI17510559, Length=402, Percent_Identity=34.5771144278607, Blast_Score=219, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17507945, Length=357, Percent_Identity=36.4145658263305, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=33.9673913043478, Blast_Score=211, Evalue=7e-55,
Organism=Caenorhabditis elegans, GI17509811, Length=371, Percent_Identity=33.4231805929919, Blast_Score=210, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI71995724, Length=363, Percent_Identity=35.8126721763085, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507121, Length=361, Percent_Identity=35.1800554016621, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=33.9673913043478, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI86570094, Length=360, Percent_Identity=35.8333333333333, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=34.7107438016529, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17510309, Length=389, Percent_Identity=33.9331619537275, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=34.7107438016529, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI71987143, Length=361, Percent_Identity=32.409972299169, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17507881, Length=386, Percent_Identity=35.7512953367876, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI32565321, Length=399, Percent_Identity=31.328320802005, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=31.7204301075269, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI17507877, Length=368, Percent_Identity=35.3260869565217, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17507879, Length=368, Percent_Identity=35.054347826087, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17537549, Length=402, Percent_Identity=31.592039800995, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=33.7912087912088, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17505370, Length=346, Percent_Identity=32.9479768786127, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=29.7368421052632, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI71982858, Length=366, Percent_Identity=30.6010928961749, Blast_Score=174, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17507641, Length=396, Percent_Identity=33.3333333333333, Blast_Score=164, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI115532548, Length=425, Percent_Identity=30.3529411764706, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI115532546, Length=377, Percent_Identity=30.2387267904509, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI193208216, Length=378, Percent_Identity=32.5396825396825, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI25148203, Length=425, Percent_Identity=26.8235294117647, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=33.6898395721925, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI71990816, Length=384, Percent_Identity=30.2083333333333, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=29.9504950495049, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=29.9504950495049, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17536103, Length=406, Percent_Identity=30.5418719211823, Blast_Score=144, Evalue=9e-35,
Organism=Caenorhabditis elegans, GI17556951, Length=393, Percent_Identity=29.0076335877863, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=29.2263610315186, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17553716, Length=357, Percent_Identity=28.2913165266106, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25148291, Length=341, Percent_Identity=29.3255131964809, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=431, Percent_Identity=24.8259860788863, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI25148205, Length=349, Percent_Identity=24.9283667621776, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71982862, Length=213, Percent_Identity=32.8638497652582, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17557982, Length=407, Percent_Identity=22.8501228501229, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=46.0674157303371, Blast_Score=89, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6324217, Length=350, Percent_Identity=38, Blast_Score=229, Evalue=5e-61,
Organism=Saccharomyces cerevisiae, GI6325138, Length=372, Percent_Identity=37.0967741935484, Blast_Score=226, Evalue=6e-60,
Organism=Saccharomyces cerevisiae, GI6323021, Length=364, Percent_Identity=35.989010989011, Blast_Score=225, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6324778, Length=372, Percent_Identity=35.752688172043, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6321360, Length=384, Percent_Identity=34.375, Blast_Score=213, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=375, Percent_Identity=34.6666666666667, Blast_Score=212, Evalue=9e-56,
Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=32.8840970350404, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=34.1666666666667, Blast_Score=203, Evalue=5e-53,
Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=36.056338028169, Blast_Score=192, Evalue=7e-50,
Organism=Saccharomyces cerevisiae, GI6320119, Length=370, Percent_Identity=34.5945945945946, Blast_Score=178, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6320449, Length=378, Percent_Identity=31.4814814814815, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=32.8729281767956, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=32.8729281767956, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6322427, Length=360, Percent_Identity=30.8333333333333, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6319618, Length=407, Percent_Identity=31.6953316953317, Blast_Score=166, Evalue=8e-42,
Organism=Saccharomyces cerevisiae, GI6319714, Length=358, Percent_Identity=32.4022346368715, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321111, Length=364, Percent_Identity=29.9450549450549, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6321963, Length=441, Percent_Identity=30.6122448979592, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321267, Length=432, Percent_Identity=31.0185185185185, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6324620, Length=372, Percent_Identity=30.3763440860215, Blast_Score=159, Evalue=9e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=393, Percent_Identity=31.0432569974555, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=26.4563106796117, Blast_Score=146, Evalue=8e-36,
Organism=Saccharomyces cerevisiae, GI6320173, Length=242, Percent_Identity=33.8842975206612, Blast_Score=133, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6322876, Length=466, Percent_Identity=27.4678111587983, Blast_Score=125, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=376, Percent_Identity=28.4574468085106, Blast_Score=124, Evalue=3e-29,
Organism=Drosophila melanogaster, GI21356161, Length=374, Percent_Identity=37.1657754010695, Blast_Score=243, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24662330, Length=365, Percent_Identity=36.4383561643836, Blast_Score=235, Evalue=5e-62,
Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=36.0795454545455, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24644487, Length=352, Percent_Identity=35.2272727272727, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI45551833, Length=352, Percent_Identity=35.2272727272727, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI24644485, Length=352, Percent_Identity=35.2272727272727, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI24644483, Length=352, Percent_Identity=35.2272727272727, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI24644479, Length=352, Percent_Identity=35.2272727272727, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI281361218, Length=352, Percent_Identity=35.2272727272727, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644481, Length=352, Percent_Identity=35.2272727272727, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=36.9627507163324, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24585582, Length=376, Percent_Identity=33.2446808510638, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI18857967, Length=361, Percent_Identity=36.01108033241, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI21355075, Length=349, Percent_Identity=35.243553008596, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=34.0369393139842, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24645031, Length=361, Percent_Identity=34.0720221606648, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=34.733893557423, Blast_Score=207, Evalue=8e-54,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.3932584269663, Blast_Score=207, Evalue=8e-54,
Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=33.0623306233062, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24583281, Length=368, Percent_Identity=31.5217391304348, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24583279, Length=368, Percent_Identity=31.5217391304348, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI17136814, Length=389, Percent_Identity=32.9048843187661, Blast_Score=191, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24584994, Length=372, Percent_Identity=31.989247311828, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=33.8658146964856, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=33.1491712707182, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=33.1491712707182, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=33.1491712707182, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=33.1491712707182, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24581954, Length=371, Percent_Identity=31.266846361186, Blast_Score=171, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24581952, Length=371, Percent_Identity=31.266846361186, Blast_Score=171, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24581956, Length=371, Percent_Identity=31.266846361186, Blast_Score=171, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24642822, Length=367, Percent_Identity=30.5177111716621, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=29.873417721519, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI28571808, Length=351, Percent_Identity=32.7635327635328, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI28571809, Length=351, Percent_Identity=32.7635327635328, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24666101, Length=356, Percent_Identity=31.4606741573034, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI19920478, Length=387, Percent_Identity=32.8165374677003, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI20130173, Length=375, Percent_Identity=30.9333333333333, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=28.6908077994429, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI21355559, Length=382, Percent_Identity=31.413612565445, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI17136666, Length=423, Percent_Identity=28.8416075650118, Blast_Score=141, Evalue=7e-34,
Organism=Drosophila melanogaster, GI28571338, Length=460, Percent_Identity=29.5652173913043, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI18859659, Length=460, Percent_Identity=29.5652173913043, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24668515, Length=323, Percent_Identity=28.4829721362229, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=26.0744985673352, Blast_Score=119, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 46752; Mature: 46752

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPAL
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHH
QHLIDFPRRYSGHARILILTPTRELASQIHRYACHLATGQGLNIAIITGGVPYGPQEEAL
HHHHHCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHH
KDNIDILVATPGRLMEYLDKGKFSAESVDILIIDEADRMLDMGFSAVVKAIALEAQGRKQ
HCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCC
NMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEKAKIHQWIHLADDKEHKIALLCYLL
CEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
KQEDVKRAIVFVKTRDVVSSLEGQLLKAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLL
HHHHHHEEEEEEEHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEE
ATDVAARGIDIDDISHVINFDMPRSADSYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKI
EECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHCHHHHHHH
ERYIEQPLKRRIIEELRPKHKEARVPTKKKAKVKAKEAAKRTSKKEAAKKASKIARKKQ
HHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQFEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPAL
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHH
QHLIDFPRRYSGHARILILTPTRELASQIHRYACHLATGQGLNIAIITGGVPYGPQEEAL
HHHHHCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHH
KDNIDILVATPGRLMEYLDKGKFSAESVDILIIDEADRMLDMGFSAVVKAIALEAQGRKQ
HCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCC
NMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEKAKIHQWIHLADDKEHKIALLCYLL
CEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
KQEDVKRAIVFVKTRDVVSSLEGQLLKAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLL
HHHHHHEEEEEEEHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEE
ATDVAARGIDIDDISHVINFDMPRSADSYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKI
EECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHCHHHHHHH
ERYIEQPLKRRIIEELRPKHKEARVPTKKKAKVKAKEAAKRTSKKEAAKKASKIARKKQ
HHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]