Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921703

Identifier: 117921703

GI number: 117921703

Start: 3907665

End: 3908021

Strand: Direct

Name: 117921703

Synonym: Shewana3_3265

Alternate gene names: NA

Gene position: 3907665-3908021 (Clockwise)

Preceding gene: 117921702

Following gene: 117921704

Centisome position: 78.59

GC content: 51.82

Gene sequence:

>357_bases
ATGCCCCTGATAGCAGAACAAACAGCCGAAGCCTTAGTGCAAGCCCAGTTAGTCGCCTATAACCAGCACGACCTTGCAAG
CTTTGTGGCGCTCTTTAGCGACGACGTTTGTATTTATCGCCCACCCACCACAGAGCCCGTGATCCGAGGCAAGGCTGCCT
TTAGTGATTTCTATCAGAATGAACGTTTTAACTTGCCGCATCTGCACGCCGAGATCCTCAATCGTATGGTGGTCGGCAAT
AAAGTGGTCGATCACGAACGGATCAGCGGCATCCGCGAGGAGCCCTTTGAAGTCATGGTGGTCTTTGAAGTCTCTAATGG
CCTTATCCAAGCGATGTGGAGCTTTGCCGCTAACTAG

Upstream 100 bases:

>100_bases
ATAATAAGCGTTGAAAAGCCCTTTCTCGTTAACCTTGACGGGCTAACGTCTCTTGTCAGATTCAGCCCCTATTTTGAAGG
AAGATAGCTTGAGCCAGCAA

Downstream 100 bases:

>100_bases
GGCGAGCTCTAAATGGCCATATCAAGCTGACTAGCGTAGCAACAATCATCTGCGGCAAAGGCGCTCGCCAAAGCGGTGAA
AAATGTTACGCCTATCCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Protein

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQNERFNLPHLHAEILNRMVVGN
KVVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN

Sequences:

>Translated_118_residues
MPLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQNERFNLPHLHAEILNRMVVGN
KVVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN
>Mature_117_residues
PLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQNERFNLPHLHAEILNRMVVGNK
VVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN

Specific function: Unknown

COG id: COG4538

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13335; Mature: 13204

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQN
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCHHCCHHHHHHHHCC
ERFNLPHLHAEILNRMVVGNKVVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN
CCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
PLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQN
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCHHCCHHHHHHHHCC
ERFNLPHLHAEILNRMVVGNKVVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN
CCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA