| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is purE [H]
Identifier: 117921593
GI number: 117921593
Start: 3784624
End: 3785115
Strand: Direct
Name: purE [H]
Synonym: Shewana3_3155
Alternate gene names: 117921593
Gene position: 3784624-3785115 (Clockwise)
Preceding gene: 117921592
Following gene: 117921594
Centisome position: 76.12
GC content: 51.42
Gene sequence:
>492_bases ATGCAAGCCCTTGTTGCTGTTGTTATGGGTTCTAAGAGTGATTGGCCCACAATGGAAGCCGCCGCTGAGATCATGGATAA ACTGCAAGTGCCTTACCATGTTGAAGTCGTATCTGCCCATAGAACGCCAGATAAACTGATGGAGTTTGCAGCCGGAGCCG CTGACCGTGGTTTTAAAATTATTATCGGTGGTGCGGGCGGTGCTGCTCACTTACCCGGTATGATTGCCTCAAAAACTCGC TTACCCGTATTAGGTGTACCAGTACAAAGCAAAGCGCTGTCGGGCATGGATAGCTTACTGTCTATCGTGCAGATGCCAAA AGGCATTGCCGTTGGCACTCTGGCCATCGGAACCGCAGGTGCCTTTAACGCCGGTCTACTCGCCTGCCAAATCTTAGCCA ATAACGATGCTGAACTTGCCGCACGTTTAGAAGCCTTTAGAGAAGAACAAACCCGCGCAGTGCTGGACAATCCCGACCCG AGGGAAGCCTAA
Upstream 100 bases:
>100_bases CATGATGCTCCCGGCTCTGATAGGGGTTGCGGACATCGACTGTACCCAGACCTGATACAAGGTCAAAATATAATTAAAAT TAGTGAGTTAAGGAGTTATC
Downstream 100 bases:
>100_bases TGACTCAAGCAAGTGCAAAACCTAAGGTTTGGGTATTAGGTAATGGCCAACTTGGCGCCATGCTGACCCACGCGGGCGAG CCTTTGGCGATTGATGTTCG
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MQALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMEFAAGAADRGFKIIIGGAGGAAHLPGMIASKTR LPVLGVPVQSKALSGMDSLLSIVQMPKGIAVGTLAIGTAGAFNAGLLACQILANNDAELAARLEAFREEQTRAVLDNPDP REA
Sequences:
>Translated_163_residues MQALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMEFAAGAADRGFKIIIGGAGGAAHLPGMIASKTR LPVLGVPVQSKALSGMDSLLSIVQMPKGIAVGTLAIGTAGAFNAGLLACQILANNDAELAARLEAFREEQTRAVLDNPDP REA >Mature_163_residues MQALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMEFAAGAADRGFKIIIGGAGGAAHLPGMIASKTR LPVLGVPVQSKALSGMDSLLSIVQMPKGIAVGTLAIGTAGAFNAGLLACQILANNDAELAARLEAFREEQTRAVLDNPDP REA
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=161, Percent_Identity=70.8074534161491, Blast_Score=195, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6324702, Length=155, Percent_Identity=49.0322580645161, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 16960; Mature: 16960
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMEFAAGAADRGFKI CCHHEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEE IIGGAGGAAHLPGMIASKTRLPVLGVPVQSKALSGMDSLLSIVQMPKGIAVGTLAIGTAG EEECCCCHHHCCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC AFNAGLLACQILANNDAELAARLEAFREEQTRAVLDNPDPREA CCCHHHHEEHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQALVAVVMGSKSDWPTMEAAAEIMDKLQVPYHVEVVSAHRTPDKLMEFAAGAADRGFKI CCHHEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEE IIGGAGGAAHLPGMIASKTRLPVLGVPVQSKALSGMDSLLSIVQMPKGIAVGTLAIGTAG EEECCCCHHHCCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC AFNAGLLACQILANNDAELAARLEAFREEQTRAVLDNPDPREA CCCHHHHEEHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA