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The map label for this gene is ychM [H]

Identifier: 117921592

GI number: 117921592

Start: 3782596

End: 3784368

Strand: Direct

Name: ychM [H]

Synonym: Shewana3_3154

Alternate gene names: 117921592

Gene position: 3782596-3784368 (Clockwise)

Preceding gene: 117921587

Following gene: 117921593

Centisome position: 76.07

GC content: 50.71

Gene sequence:

>1773_bases
ATGGACCCACACGTGTCACACTCTGCTCATTTGTTTTCATTAAGAATTGCCCACGCCCTTAGCGAGGCGTGCGTAAAAGA
TAAGTATTCGGTTAAACGTTTTGGACAAGATCTGCTGGCGGGACTGACCGTCGGGATTATTGCCATTCCGTTGGCGATGG
CACTGGCCATTGCCAGCGGTGTCGCCCCACAATATGGCCTATACACCGCCATTGTCGGTGGTTTTATCATAGCGATGACG
GGCGGCTCCCGTTATAGCGTCTCAGGACCAACGGCCGCCTTCGTCGTATTACTCTATCCCATCGCCCAGCAATTTGGTTT
GGCAGGGCTGCTCATTGCGACTGTGATGTCAGGCATGATGTTAGTCGCCATGGCGATGTTAAGGCTCGGCAGATTGATCC
TCTACATCCCAGAATCCGTCACCTTAGGTTTTACCGCAGGGATTGGGGTAGTGATTGCAACTTTGCAGCTAAAAGACTTC
TTTGGCCTGCATATAGAGCACATGCCGGAGCAATATTTTTCCAAAATCATGGCCTTAGGCCAGGCATTACCCAGCCTTCA
CTTGCCGAGCTTGTTAGTCGCCGCGGCCACCTTAGCCACTATGCTACTCTGGCCTAAATTGAAGCTCCCAGTACCAGCCC
ATCTGCCCGCAATCGCCTTAGGCAGTATTCTTGCCCTAGTGTTAAATGCCATGGGCGCCGATATTGAAACCATAGGAACA
CGCTTTCATTATCAATTAAGCGACGGCAGTGTCGGCACAGGTATTCCCGCTGTACTCCCCCACTTTGAATGGCCTTGGTT
ACAAACGGGCGCAAACGGTCAAACCTTTGAATTTAATCTGGCGACCTTTCAAGCCTTACTGCCCGCCGCCTTTGCGATTG
CCATGTTAGGTGCGATTGAATCGCTGCTGTGTGCCGTAGTGCTCGATGGCATGACAGGAAAACGCCACAGCGCGAATAGT
GAGCTCCTCGGCCAAGGTATAGGTAACATCATTACCCCATTTTTTGGCGGTATCCCAGCAACGGCGGCCATTGCGCGCAG
CGCGGCAAACGTTAAGGCGGGAGCCCAGAGCCCAATAGCATCGATGATCCACGCCATAGTGGTCTTGGTGGGTTTAGTCG
CGCTCGCGGGAGTATTAGCCTACTTACCCATGTCAGCCATGGCCGCATTATTATTGGTGGTGGCTTGGAATATGAGTGAA
GCCCCCAAAGCGGTGCATTTACTGAAAACGGCCCCCACCAGCGATATCTTAGTATTTTTAACTTGTTTTTCACTCACAGT
CATTTTCGACATGGTGATCGCCATCAGTGTAGGGATTATCTTAGCCGCCCTACTGTTTATGAAAGAAATTGCTGAGATGA
CCAAGCTTTATGATATCAGCAGCAATAAGCGCTATGTCGATCACCCCCTCCCCGCTGACTGGGCGGTGATAAAAATTAAC
GGTCCATTATTCTTTGCCGCGGCTGATCGAATTTTTGCCGAGATAGCGAGCCTCACCCAAGACAAACAAGTCATCGTCCT
TTACTTAGATGGGGTATCCATCCTCGATGCGGGGGGCCTTGCGGCGCTCAATAAACTCATCGATAAATGTAAACTTAACC
ACACTAAGCTGATCATTGCCGATTTGCAGTTCCAACCTATTCGCACCCTAGCGAGAGCTAAAGTGCAACCAATTGAGGGC
GTACTGAAGTTTTATCCCACCCTGCGCGAAGCCTTGGCAGAAGCGCCAGTGCCAGAACAGATTATCGAATCAAGTACGAC
TGTCACTCATTAA

Upstream 100 bases:

>100_bases
ATTTATCAAAAACAAAGACATTTAACCGTCTTTTGCAACTATGATCACACAAGGACATTTTTCTGGACTCTAAAATAGAG
CCTTGTAACAAGCCGCGTTT

Downstream 100 bases:

>100_bases
CCCTCAAGTTAACGCTTATTATACCTGTCCCCTGAAACCTTTAATGGTCTCAGGGGATTTAAGCCCATTCAGCGAACACT
TTATCCACGCTAAAAGCGCT

Product: putative sulfate transporter YchM

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MDPHVSHSAHLFSLRIAHALSEACVKDKYSVKRFGQDLLAGLTVGIIAIPLAMALAIASGVAPQYGLYTAIVGGFIIAMT
GGSRYSVSGPTAAFVVLLYPIAQQFGLAGLLIATVMSGMMLVAMAMLRLGRLILYIPESVTLGFTAGIGVVIATLQLKDF
FGLHIEHMPEQYFSKIMALGQALPSLHLPSLLVAAATLATMLLWPKLKLPVPAHLPAIALGSILALVLNAMGADIETIGT
RFHYQLSDGSVGTGIPAVLPHFEWPWLQTGANGQTFEFNLATFQALLPAAFAIAMLGAIESLLCAVVLDGMTGKRHSANS
ELLGQGIGNIITPFFGGIPATAAIARSAANVKAGAQSPIASMIHAIVVLVGLVALAGVLAYLPMSAMAALLLVVAWNMSE
APKAVHLLKTAPTSDILVFLTCFSLTVIFDMVIAISVGIILAALLFMKEIAEMTKLYDISSNKRYVDHPLPADWAVIKIN
GPLFFAAADRIFAEIASLTQDKQVIVLYLDGVSILDAGGLAALNKLIDKCKLNHTKLIIADLQFQPIRTLARAKVQPIEG
VLKFYPTLREALAEAPVPEQIIESSTTVTH

Sequences:

>Translated_590_residues
MDPHVSHSAHLFSLRIAHALSEACVKDKYSVKRFGQDLLAGLTVGIIAIPLAMALAIASGVAPQYGLYTAIVGGFIIAMT
GGSRYSVSGPTAAFVVLLYPIAQQFGLAGLLIATVMSGMMLVAMAMLRLGRLILYIPESVTLGFTAGIGVVIATLQLKDF
FGLHIEHMPEQYFSKIMALGQALPSLHLPSLLVAAATLATMLLWPKLKLPVPAHLPAIALGSILALVLNAMGADIETIGT
RFHYQLSDGSVGTGIPAVLPHFEWPWLQTGANGQTFEFNLATFQALLPAAFAIAMLGAIESLLCAVVLDGMTGKRHSANS
ELLGQGIGNIITPFFGGIPATAAIARSAANVKAGAQSPIASMIHAIVVLVGLVALAGVLAYLPMSAMAALLLVVAWNMSE
APKAVHLLKTAPTSDILVFLTCFSLTVIFDMVIAISVGIILAALLFMKEIAEMTKLYDISSNKRYVDHPLPADWAVIKIN
GPLFFAAADRIFAEIASLTQDKQVIVLYLDGVSILDAGGLAALNKLIDKCKLNHTKLIIADLQFQPIRTLARAKVQPIEG
VLKFYPTLREALAEAPVPEQIIESSTTVTH
>Mature_590_residues
MDPHVSHSAHLFSLRIAHALSEACVKDKYSVKRFGQDLLAGLTVGIIAIPLAMALAIASGVAPQYGLYTAIVGGFIIAMT
GGSRYSVSGPTAAFVVLLYPIAQQFGLAGLLIATVMSGMMLVAMAMLRLGRLILYIPESVTLGFTAGIGVVIATLQLKDF
FGLHIEHMPEQYFSKIMALGQALPSLHLPSLLVAAATLATMLLWPKLKLPVPAHLPAIALGSILALVLNAMGADIETIGT
RFHYQLSDGSVGTGIPAVLPHFEWPWLQTGANGQTFEFNLATFQALLPAAFAIAMLGAIESLLCAVVLDGMTGKRHSANS
ELLGQGIGNIITPFFGGIPATAAIARSAANVKAGAQSPIASMIHAIVVLVGLVALAGVLAYLPMSAMAALLLVVAWNMSE
APKAVHLLKTAPTSDILVFLTCFSLTVIFDMVIAISVGIILAALLFMKEIAEMTKLYDISSNKRYVDHPLPADWAVIKIN
GPLFFAAADRIFAEIASLTQDKQVIVLYLDGVSILDAGGLAALNKLIDKCKLNHTKLIIADLQFQPIRTLARAKVQPIEG
VLKFYPTLREALAEAPVPEQIIESSTTVTH

Specific function: Possible sulfate transporter [H]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=587, Percent_Identity=25.5536626916525, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI262206075, Length=587, Percent_Identity=25.5536626916525, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI262206069, Length=587, Percent_Identity=25.5536626916525, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI262206063, Length=587, Percent_Identity=25.5536626916525, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI4557535, Length=497, Percent_Identity=25.3521126760563, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI94721259, Length=428, Percent_Identity=23.3644859813084, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI94721255, Length=428, Percent_Identity=23.3644859813084, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI94721257, Length=428, Percent_Identity=23.3644859813084, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI94721253, Length=428, Percent_Identity=23.3644859813084, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI20336282, Length=547, Percent_Identity=23.400365630713, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI16306483, Length=547, Percent_Identity=23.400365630713, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI45827800, Length=498, Percent_Identity=21.0843373493976, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI39752683, Length=498, Percent_Identity=21.0843373493976, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI45827802, Length=465, Percent_Identity=20.4301075268817, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI269784651, Length=385, Percent_Identity=21.8181818181818, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI16418413, Length=529, Percent_Identity=21.3610586011342, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI217272867, Length=529, Percent_Identity=21.3610586011342, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI4505697, Length=405, Percent_Identity=23.9506172839506, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI47131207, Length=556, Percent_Identity=25, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI20336272, Length=556, Percent_Identity=25, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87081859, Length=567, Percent_Identity=55.7319223985891, Blast_Score=589, Evalue=1e-169,
Organism=Caenorhabditis elegans, GI193203292, Length=521, Percent_Identity=21.6890595009597, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17566848, Length=553, Percent_Identity=23.1464737793852, Blast_Score=92, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI86565215, Length=615, Percent_Identity=23.4146341463415, Blast_Score=89, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6325260, Length=451, Percent_Identity=23.059866962306, Blast_Score=97, Evalue=5e-21,
Organism=Drosophila melanogaster, GI85815873, Length=438, Percent_Identity=28.7671232876712, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24651449, Length=442, Percent_Identity=23.5294117647059, Blast_Score=112, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24649801, Length=434, Percent_Identity=24.8847926267281, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19922482, Length=527, Percent_Identity=24.4781783681214, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI21355087, Length=429, Percent_Identity=23.0769230769231, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24647160, Length=429, Percent_Identity=23.0769230769231, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24663084, Length=378, Percent_Identity=28.3068783068783, Blast_Score=100, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21357695, Length=378, Percent_Identity=28.3068783068783, Blast_Score=100, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21358229, Length=457, Percent_Identity=24.2888402625821, Blast_Score=93, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24666186, Length=293, Percent_Identity=25.2559726962457, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 62505; Mature: 62505

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50801 STAS ; PS01130 SLC26A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPHVSHSAHLFSLRIAHALSEACVKDKYSVKRFGQDLLAGLTVGIIAIPLAMALAIASG
CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VAPQYGLYTAIVGGFIIAMTGGSRYSVSGPTAAFVVLLYPIAQQFGLAGLLIATVMSGMM
CCCCHHHHHHHHHHHEEEEECCCEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LVAMAMLRLGRLILYIPESVTLGFTAGIGVVIATLQLKDFFGLHIEHMPEQYFSKIMALG
HHHHHHHHHCCEEEEECCCCEECHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH
QALPSLHLPSLLVAAATLATMLLWPKLKLPVPAHLPAIALGSILALVLNAMGADIETIGT
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCC
RFHYQLSDGSVGTGIPAVLPHFEWPWLQTGANGQTFEFNLATFQALLPAAFAIAMLGAIE
EEEEEECCCCCCCCCHHHCCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
SLLCAVVLDGMTGKRHSANSELLGQGIGNIITPFFGGIPATAAIARSAANVKAGAQSPIA
HHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHH
SMIHAIVVLVGLVALAGVLAYLPMSAMAALLLVVAWNMSEAPKAVHLLKTAPTSDILVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH
TCFSLTVIFDMVIAISVGIILAALLFMKEIAEMTKLYDISSNKRYVDHPLPADWAVIKIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEC
GPLFFAAADRIFAEIASLTQDKQVIVLYLDGVSILDAGGLAALNKLIDKCKLNHTKLIIA
CCEEEHHHHHHHHHHHHHCCCCEEEEEEECCCHHCCCCCHHHHHHHHHHHCCCCCEEEEE
DLQFQPIRTLARAKVQPIEGVLKFYPTLREALAEAPVPEQIIESSTTVTH
ECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MDPHVSHSAHLFSLRIAHALSEACVKDKYSVKRFGQDLLAGLTVGIIAIPLAMALAIASG
CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VAPQYGLYTAIVGGFIIAMTGGSRYSVSGPTAAFVVLLYPIAQQFGLAGLLIATVMSGMM
CCCCHHHHHHHHHHHEEEEECCCEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LVAMAMLRLGRLILYIPESVTLGFTAGIGVVIATLQLKDFFGLHIEHMPEQYFSKIMALG
HHHHHHHHHCCEEEEECCCCEECHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH
QALPSLHLPSLLVAAATLATMLLWPKLKLPVPAHLPAIALGSILALVLNAMGADIETIGT
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCC
RFHYQLSDGSVGTGIPAVLPHFEWPWLQTGANGQTFEFNLATFQALLPAAFAIAMLGAIE
EEEEEECCCCCCCCCHHHCCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
SLLCAVVLDGMTGKRHSANSELLGQGIGNIITPFFGGIPATAAIARSAANVKAGAQSPIA
HHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHH
SMIHAIVVLVGLVALAGVLAYLPMSAMAALLLVVAWNMSEAPKAVHLLKTAPTSDILVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH
TCFSLTVIFDMVIAISVGIILAALLFMKEIAEMTKLYDISSNKRYVDHPLPADWAVIKIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEC
GPLFFAAADRIFAEIASLTQDKQVIVLYLDGVSILDAGGLAALNKLIDKCKLNHTKLIIA
CCEEEHHHHHHHHHHHHHCCCCEEEEEEECCCHHCCCCCHHHHHHHHHHHCCCCCEEEEE
DLQFQPIRTLARAKVQPIEGVLKFYPTLREALAEAPVPEQIIESSTTVTH
ECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]