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The map label for this gene is yaaA [C]

Identifier: 117921581

GI number: 117921581

Start: 3768597

End: 3769370

Strand: Reverse

Name: yaaA [C]

Synonym: Shewana3_3143

Alternate gene names: 117921581

Gene position: 3769370-3768597 (Counterclockwise)

Preceding gene: 117921582

Following gene: 117921579

Centisome position: 75.81

GC content: 43.54

Gene sequence:

>774_bases
ATGTTGATTTTGGTTTCACCGGCGAAAACCCTAGATTTTGAGCAACCTCCCTTGACTCAAACCCACACTCGGCCCGATTT
TTTAGCTTATAGCCAAGAGCTCATTCAAGTCTGCCAACGGTTAACCCCCAGTGACATAGCAACATTAATGAAGGTGAGCG
ATAACATCGCAGGTTTAAATGCCGCGCGTTTTGGGGAGTGGACACCCGATTACAGCATTGATAATGCTAAGCAGGCGATT
TTTGCTTTTAGAGGCGATGTTTACACGGGGTTTGATGCTGATACGCTGACACCCGAACAGCTCGAACGTACCCAGTCACA
ATTGCGTATTTTATCTGGGCTCTACGGTTTACTGCGCCCCTTGGATTTGATTTTACCTTATCGCTTAGAAATGGGGACGG
CGCTTGCCAATCCTAAAGGTAAGAATCTCTACGATTTTTGGGGTAATACTCTCACCGAAGCGGTCAATAATGCGGTCGCA
GCGCAGGGCGATGACATCATTATCAACCTCGCATCTAATGAATATTTCAAGGCGATAAAACGAAAACAATTAGCTGGTCA
ATTAATCACTCCTGTCTTTAAAGATTTTAAAAATGGCCAATATAAAGTCATCAGTTTTTTTGCTAAAAAGGCAAGGGGAA
TGATGGCAAGATATATCATTGACCAGCAAGTGAGTTCGATTGAGGAATTAAAGGCGTTTGATGTGGCAGGTTATTACTAC
AGTGAAGAATTGAGTAAACCGAATGAGCCAACATTCTTGCGTGAAGCGCAGTAA

Upstream 100 bases:

>100_bases
TTCACTGATTAGCGCTATCGGAAAAACCACGTCATCCGTACGTGGTTTTTTTATGCTTGTTCAGTATCATAGTGGCGTAT
TTTTTTGTTGGAGCGTGTTA

Downstream 100 bases:

>100_bases
CTCATAATGCGTGAAATAAAAAGAGCAGCCTAGGCTGCTCTTTTTATTTACGAAGGATGTGCTGGCAGAAGATTATTTCG
ACTCAGTACTAATCGGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLILVSPAKTLDFEQPPLTQTHTRPDFLAYSQELIQVCQRLTPSDIATLMKVSDNIAGLNAARFGEWTPDYSIDNAKQAI
FAFRGDVYTGFDADTLTPEQLERTQSQLRILSGLYGLLRPLDLILPYRLEMGTALANPKGKNLYDFWGNTLTEAVNNAVA
AQGDDIIINLASNEYFKAIKRKQLAGQLITPVFKDFKNGQYKVISFFAKKARGMMARYIIDQQVSSIEELKAFDVAGYYY
SEELSKPNEPTFLREAQ

Sequences:

>Translated_257_residues
MLILVSPAKTLDFEQPPLTQTHTRPDFLAYSQELIQVCQRLTPSDIATLMKVSDNIAGLNAARFGEWTPDYSIDNAKQAI
FAFRGDVYTGFDADTLTPEQLERTQSQLRILSGLYGLLRPLDLILPYRLEMGTALANPKGKNLYDFWGNTLTEAVNNAVA
AQGDDIIINLASNEYFKAIKRKQLAGQLITPVFKDFKNGQYKVISFFAKKARGMMARYIIDQQVSSIEELKAFDVAGYYY
SEELSKPNEPTFLREAQ
>Mature_257_residues
MLILVSPAKTLDFEQPPLTQTHTRPDFLAYSQELIQVCQRLTPSDIATLMKVSDNIAGLNAARFGEWTPDYSIDNAKQAI
FAFRGDVYTGFDADTLTPEQLERTQSQLRILSGLYGLLRPLDLILPYRLEMGTALANPKGKNLYDFWGNTLTEAVNNAVA
AQGDDIIINLASNEYFKAIKRKQLAGQLITPVFKDFKNGQYKVISFFAKKARGMMARYIIDQQVSSIEELKAFDVAGYYY
SEELSKPNEPTFLREAQ

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family [H]

Homologues:

Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=53.6964980544747, Blast_Score=301, Evalue=2e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 28955; Mature: 28955

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILVSPAKTLDFEQPPLTQTHTRPDFLAYSQELIQVCQRLTPSDIATLMKVSDNIAGLN
CEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
AARFGEWTPDYSIDNAKQAIFAFRGDVYTGFDADTLTPEQLERTQSQLRILSGLYGLLRP
HHHCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDLILPYRLEMGTALANPKGKNLYDFWGNTLTEAVNNAVAAQGDDIIINLASNEYFKAIK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
RKQLAGQLITPVFKDFKNGQYKVISFFAKKARGMMARYIIDQQVSSIEELKAFDVAGYYY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEELSKPNEPTFLREAQ
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLILVSPAKTLDFEQPPLTQTHTRPDFLAYSQELIQVCQRLTPSDIATLMKVSDNIAGLN
CEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
AARFGEWTPDYSIDNAKQAIFAFRGDVYTGFDADTLTPEQLERTQSQLRILSGLYGLLRP
HHHCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDLILPYRLEMGTALANPKGKNLYDFWGNTLTEAVNNAVAAQGDDIIINLASNEYFKAIK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
RKQLAGQLITPVFKDFKNGQYKVISFFAKKARGMMARYIIDQQVSSIEELKAFDVAGYYY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEELSKPNEPTFLREAQ
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA