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The map label for this gene is puuD [H]

Identifier: 117921537

GI number: 117921537

Start: 3718112

End: 3718873

Strand: Reverse

Name: puuD [H]

Synonym: Shewana3_3099

Alternate gene names: 117921537

Gene position: 3718873-3718112 (Counterclockwise)

Preceding gene: 117921538

Following gene: 117921536

Centisome position: 74.79

GC content: 50.52

Gene sequence:

>762_bases
ATGTCTGTCGAGTTGCCCCTTATTGGTGTTATTGCGTGTAATCAACAATTGGGATCACATCCCTTTAATATTGTTGGTGA
AAAATACCTCTTAGGTGTAGTGAATGGTGCTAAGGGCTGGCCCTTGGTGATCCCCTCATTAGGTGCTGAACAACCTATAG
AGGCGATTCTGGCAAGTCTCGATGGCATTCTCTTTACCGGTTCGCCTTCGAATGTTGAACCCCATCTCTATGCGGGTGAA
CCGAGTGAAGTCGGTACTCACCACGATCCCAAACGCGATGCCACCACCTTACCGCTCATCCGTGCGGCCATTGCGGCGGG
TGTGCCTGTGCTTGGGATTTGTCGTGGCTTTCAAGAGATGAACGTGGCGTTTGGTGGCAGTTTGCATCAGAAGTTGCACG
AAGTGGGCGGTTTTATTGAACACAGAGAAGATAAAGAGGCCTCGTTAGAGGTGCAATATGGGCCATCCCACAGTATCACT
GTGGAGCCTGGGGGGGTCATTTACGAGGCCTGGGGCCGTAACTCGGCAGAGGTAAACTCTGTACATACTCAGGGCGTGGA
GCGTCTTGGGATTGGGTTGCGGCCAGAAGCTTATGCTCCAGATGGTCTAGTGGAGGCCTTCTCCGTTATAGACACAAATG
AATTTGCCCTAGGTGTGCAATGGCATCCTGAATGGAAGGTGAGTGAAAACCCATTTTTCCTCTCTATATTCAATGCCTTT
GGTGATGCGTGCCGTCGTAGGGCTACAACTCGAGTGAAATAA

Upstream 100 bases:

>100_bases
TAACCTCTTGCCTGAGGTTAAAATTCGGTGTACTGTGTGAAAAAATGAACATTAAAACTTAACATGTTCATTATGCAGTC
ATTCAAGGTGAAGGTGAGTT

Downstream 100 bases:

>100_bases
AATGAATAAGCTAATCGCTTTTTTAAAAGAACGAAAAATCACAGAAGTCGAATGTGTTATCAGCGATATGACAGGTATCG
CCCGCGGAAAAATTGCCCCA

Product: peptidase C26

Products: NA

Alternate protein names: Gamma-Glu-GABA hydrolase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSVELPLIGVIACNQQLGSHPFNIVGEKYLLGVVNGAKGWPLVIPSLGAEQPIEAILASLDGILFTGSPSNVEPHLYAGE
PSEVGTHHDPKRDATTLPLIRAAIAAGVPVLGICRGFQEMNVAFGGSLHQKLHEVGGFIEHREDKEASLEVQYGPSHSIT
VEPGGVIYEAWGRNSAEVNSVHTQGVERLGIGLRPEAYAPDGLVEAFSVIDTNEFALGVQWHPEWKVSENPFFLSIFNAF
GDACRRRATTRVK

Sequences:

>Translated_253_residues
MSVELPLIGVIACNQQLGSHPFNIVGEKYLLGVVNGAKGWPLVIPSLGAEQPIEAILASLDGILFTGSPSNVEPHLYAGE
PSEVGTHHDPKRDATTLPLIRAAIAAGVPVLGICRGFQEMNVAFGGSLHQKLHEVGGFIEHREDKEASLEVQYGPSHSIT
VEPGGVIYEAWGRNSAEVNSVHTQGVERLGIGLRPEAYAPDGLVEAFSVIDTNEFALGVQWHPEWKVSENPFFLSIFNAF
GDACRRRATTRVK
>Mature_252_residues
SVELPLIGVIACNQQLGSHPFNIVGEKYLLGVVNGAKGWPLVIPSLGAEQPIEAILASLDGILFTGSPSNVEPHLYAGEP
SEVGTHHDPKRDATTLPLIRAAIAAGVPVLGICRGFQEMNVAFGGSLHQKLHEVGGFIEHREDKEASLEVQYGPSHSITV
EPGGVIYEAWGRNSAEVNSVHTQGVERLGIGLRPEAYAPDGLVEAFSVIDTNEFALGVQWHPEWKVSENPFFLSIFNAFG
DACRRRATTRVK

Specific function: Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma- aminobutyrate [H]

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=250, Percent_Identity=44.8, Blast_Score=195, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: =3.5.1.94 [H]

Molecular weight: Translated: 27264; Mature: 27133

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVELPLIGVIACNQQLGSHPFNIVGEKYLLGVVNGAKGWPLVIPSLGAEQPIEAILASL
CCCCCCEEEEEEECHHHCCCCCHHCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHH
DGILFTGSPSNVEPHLYAGEPSEVGTHHDPKRDATTLPLIRAAIAAGVPVLGICRGFQEM
CCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCHHHH
NVAFGGSLHQKLHEVGGFIEHREDKEASLEVQYGPSHSITVEPGGVIYEAWGRNSAEVNS
HHHCCCHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCCCCHHH
VHTQGVERLGIGLRPEAYAPDGLVEAFSVIDTNEFALGVQWHPEWKVSENPFFLSIFNAF
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEECCCCEEEEHHHHH
GDACRRRATTRVK
HHHHHHHHHCCCC
>Mature Secondary Structure 
SVELPLIGVIACNQQLGSHPFNIVGEKYLLGVVNGAKGWPLVIPSLGAEQPIEAILASL
CCCCCEEEEEEECHHHCCCCCHHCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHH
DGILFTGSPSNVEPHLYAGEPSEVGTHHDPKRDATTLPLIRAAIAAGVPVLGICRGFQEM
CCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCHHHH
NVAFGGSLHQKLHEVGGFIEHREDKEASLEVQYGPSHSITVEPGGVIYEAWGRNSAEVNS
HHHCCCHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCCCCHHH
VHTQGVERLGIGLRPEAYAPDGLVEAFSVIDTNEFALGVQWHPEWKVSENPFFLSIFNAF
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEECCCCEEEEHHHHH
GDACRRRATTRVK
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]