| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yqeY [H]
Identifier: 117921523
GI number: 117921523
Start: 3697182
End: 3697625
Strand: Direct
Name: yqeY [H]
Synonym: Shewana3_3085
Alternate gene names: 117921523
Gene position: 3697182-3697625 (Clockwise)
Preceding gene: 117921522
Following gene: 117921524
Centisome position: 74.36
GC content: 47.75
Gene sequence:
>444_bases ATGAGCCTAATTGATCAGCTAAAAGACCATATGAAACAGGCCATGATCGCCAAAGAGAAGGCGAGATTGAGCACTATTCG TATGGCACTTGCAGCCATCAAACAGATTGAAGTGGATACCCGCGAAACCCTGAATGATGAGCAGGTTATAGCTGTCTTAA CCAAAATGGTGAAACAACGTCGCGATTCGATTGCTCAATATGAAGCAGCGGGTCGTAGCGAGTTGGCCGCAGCAGAAGCA GAAGAGATTCAAGTTATTGAAACTTTCCTGCCGACTCCCCTCTCTGAGGCGGAAATTGCCGCGTTCATCGATGCCGCTAT TGCTGAAATAGGCGCATCCTCCATGGCGGATATGGGCAAAGTAATGGGAGCATTAAAACCTAAAGTTCAAGGACGTGCAG ACATGGGCGCTATCGGCGCTATGATCCGTGCAAAATTGCAATAA
Upstream 100 bases:
>100_bases AACTACTGCACGTAAGCGCGCTAAAGCAGCTGCAGTTAAACGTTTAGCTAAAAAGCTTTCTCGCGAAAACGCACGTCGCG TACGTTTATACTAATCTCTT
Downstream 100 bases:
>100_bases TTAGCGTTTCAATGTATGAACAAGCCGTGCCTATGCGCGGCTTGTTTGTTTAAATTCGCGCAAGGCGAGATTTTAAGCAC TCAATGGCAATACCTCGTGA
Product: GatB/Yqey domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSLIDQLKDHMKQAMIAKEKARLSTIRMALAAIKQIEVDTRETLNDEQVIAVLTKMVKQRRDSIAQYEAAGRSELAAAEA EEIQVIETFLPTPLSEAEIAAFIDAAIAEIGASSMADMGKVMGALKPKVQGRADMGAIGAMIRAKLQ
Sequences:
>Translated_147_residues MSLIDQLKDHMKQAMIAKEKARLSTIRMALAAIKQIEVDTRETLNDEQVIAVLTKMVKQRRDSIAQYEAAGRSELAAAEA EEIQVIETFLPTPLSEAEIAAFIDAAIAEIGASSMADMGKVMGALKPKVQGRADMGAIGAMIRAKLQ >Mature_146_residues SLIDQLKDHMKQAMIAKEKARLSTIRMALAAIKQIEVDTRETLNDEQVIAVLTKMVKQRRDSIAQYEAAGRSELAAAEAE EIQVIETFLPTPLSEAEIAAFIDAAIAEIGASSMADMGKVMGALKPKVQGRADMGAIGAMIRAKLQ
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 15913; Mature: 15782
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDQLKDHMKQAMIAKEKARLSTIRMALAAIKQIEVDTRETLNDEQVIAVLTKMVKQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH RDSIAQYEAAGRSELAAAEAEEIQVIETFLPTPLSEAEIAAFIDAAIAEIGASSMADMGK HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH VMGALKPKVQGRADMGAIGAMIRAKLQ HHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLIDQLKDHMKQAMIAKEKARLSTIRMALAAIKQIEVDTRETLNDEQVIAVLTKMVKQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH RDSIAQYEAAGRSELAAAEAEEIQVIETFLPTPLSEAEIAAFIDAAIAEIGASSMADMGK HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHH VMGALKPKVQGRADMGAIGAMIRAKLQ HHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]