Click here to switch to the map view.

The map label for this gene is cadC [C]

Identifier: 117921499

GI number: 117921499

Start: 3668180

End: 3670330

Strand: Reverse

Name: cadC [C]

Synonym: Shewana3_3061

Alternate gene names: 117921499

Gene position: 3670330-3668180 (Counterclockwise)

Preceding gene: 117921501

Following gene: 117921496

Centisome position: 73.82

GC content: 48.77

Gene sequence:

>2151_bases
ATGAAGGATAAGAGTAAGTTGGGTTTTTACTTGGGGAGTTGCCGTATTGACCCTTCCGATAACTCAATTTTATTTCAAAC
GCAGGGGGATGAAACCTCCTCAAATGAATCCGCTAAAGTGTCGCTTCAACCTAAGTTTATTGAAGTGCTTAGCTATCTTG
CCCTGCGTTATCCTCATGTGGTTACCCGCGATGAGTTGATTACTCAAGTGTGGGAAGGCAATGCCTACGTCGGCACTAAG
GCACTCACCAACGCGATTTGGCATTTACGGCAGCAATTATTGCCTCTAGACGTGGATGGTGGCGTGATTGAGACAGTGCG
TAAGGCTGGCTATCGATTGTTGTTACCGCCTATCTACGATCAACTCGACGATACCGAAGAAGATTTACGGCAGACCACTG
AGACTAAATTGCAACATGCCAATCAGCGTCTGCGTTTAATGGCGATGGTGCTGGGGGCCGTGGCTGTTGTCAGTAGCTTA
TTTATTGGTATGCATTTATATCAAGATAAACAGCGGATGACGGATACCCAAATGACGGTGCTGACTCGAGATCCGGGTTC
GGAGCGTTATCCAAGGTTATCCCACGATAGGCGTTGGCTTGTGTATGGCGCGAGTCGTCCTGGGGTGACATCTAGCCTCT
ATCTTAAAGATTTTAAACGTGAAGATGTTCCCGCCCGTCAGTTAACCCCTTCAACATCGGTTGAGCTGCGTGCTGTGTGG
AGCTTAGATGATACCAAGTTGTTTTTTGCCTCCCGCAGCCACGCGACGGGAAAGTGCACCATTACCCAATTGACTTTAGC
GACCAATGAGATGTTAGCTCTGGCGCCCTGTAGCACGGATATGGCGGCGATAGATATTTCCCCCGATGGTCAATATCTTG
CTTATATCTCCTCCCACGAGGCGGATAAAGTGGGAGGTATTTACCGCTTAACTTTAGCCAAAGCGGACGCTACGGCTGAA
AGATTATCCTGCGAAAGCCAGTGTAATTATGAAGATAGAGATTTAGCCTTTAGCCCCGATGGTAAATGGCTCGCGATAGC
GAGGCGCTTTAGTAATATCTCTGAGGATATTTTTATTCGCGACTTAGCCAATGCCAATGAAAAACGCTTAACCCAAGGAC
TAGAAGATATTCGCGGCTTGAGCTGGACGCCGAACAGTCAGGCGTTAGTGTTTGCCACGGAAGACTCTGGTAGTCGCAAT
GGTTTTACTATCGATATCGAAACGGCCCATATTCGGCCACTCGATGTCGAAGGTATGAGTTATCCGAGTAGCGTATCCGA
TGAGGGCGAGTTGGTTTATCACCAGTATCGCCGGCAATTCCAAATGGCGTATTTTTCCCTCGGGGATAAAGTGCCGGGCA
GTTTGTTTCCGCTGCTGTATTCCGGTATTAGCCATCGTAATCCCCATTATTCCCCAGAGGCGGGTCGAATCGTTTTTGTC
TCCAGCGATACTGGCTATAACGAGATTTGGACCTCGGATATCAAGGGGCAAAAACTAGAGCAACACACTCAGCTTAAGTC
GCGTGTCGCTTACCCGCGTTGGTCACCCGACGGTTCTAAAATTGCCTTTATCGCCCCCGATGATCGCAATGAAGGCAATC
GCATTTTTATTTTAGATTTAACCAATAAGAACATTACCGCCTTAGCCTCGAGTTATCACAACCATGGTCGCCCCAGCTGG
AATTGGCAGGGTACTGCGGTATTCGCATCGACTAGCGACGGTATCACCGAGTTTTATTTAGATAACAGTGCGCCCAAGGT
GATAAGCCCTCTGAGTATGGCGGTGGGGTTTGCCAAGTCGGCAACTGAATTGGTGTTTAGTCGTTACGGGGTGAATGGAC
TCTGGTTGATTAATCTCGCGCAGCCTGAAGAGGTAACACAGCTCATTTCCAGCAAAGTGTTTCGGTCTGGCAATAATTGG
GCAATGACGGCGGACGGGGTGTATTTCAAATCCAGTAATGGCAATGAGCAGCGATTGAATTACTGGGAGGCGAGCAGCCA
GCAAGTCACGCCACTCCTTAGGGTGCCCCGCTCGAGCCTAAGCGGGTTTGGCTCCATGACCTATATTCCGGAGTCAAACC
GCTTAGTGATGACGCTCGATGGTTTTCCGCAGCGGGATATCATCTTACTTAAACACAAACTGCTTCAGTAG

Upstream 100 bases:

>100_bases
CATTGGATTGTCATCTTTGTTAAGTCTTAGGTAGTATTTAGCCACACGATGTACTCATTACCCTAACCATAAAAAGACGA
ATAGCGAAGGTGTGAGAAAA

Downstream 100 bases:

>100_bases
GTTTGAGCTTTACTTAGCGCTAAAGCGTCCGCCTAATACGGCTTCGCGGGAGGCGCCTGTCACCGCAGGCAGGTTGGCGG
GCAAACCTAAATGGTGGCGC

Product: transcriptional regulator domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator Domain-Containing Protein; Amidohydrolase; Regulatory Protein; Serine/Threonine Protein Kinase; Transcriptional Regulatory Protein-Like; Transcriptional Regulator CadC; LB Domain Protein; LB Domain-Containing Protein; Peptidase S9B Dipeptidylpeptidase IV Subunit; Transcriptional Regulatory Protein-Like Protein

Number of amino acids: Translated: 716; Mature: 716

Protein sequence:

>716_residues
MKDKSKLGFYLGSCRIDPSDNSILFQTQGDETSSNESAKVSLQPKFIEVLSYLALRYPHVVTRDELITQVWEGNAYVGTK
ALTNAIWHLRQQLLPLDVDGGVIETVRKAGYRLLLPPIYDQLDDTEEDLRQTTETKLQHANQRLRLMAMVLGAVAVVSSL
FIGMHLYQDKQRMTDTQMTVLTRDPGSERYPRLSHDRRWLVYGASRPGVTSSLYLKDFKREDVPARQLTPSTSVELRAVW
SLDDTKLFFASRSHATGKCTITQLTLATNEMLALAPCSTDMAAIDISPDGQYLAYISSHEADKVGGIYRLTLAKADATAE
RLSCESQCNYEDRDLAFSPDGKWLAIARRFSNISEDIFIRDLANANEKRLTQGLEDIRGLSWTPNSQALVFATEDSGSRN
GFTIDIETAHIRPLDVEGMSYPSSVSDEGELVYHQYRRQFQMAYFSLGDKVPGSLFPLLYSGISHRNPHYSPEAGRIVFV
SSDTGYNEIWTSDIKGQKLEQHTQLKSRVAYPRWSPDGSKIAFIAPDDRNEGNRIFILDLTNKNITALASSYHNHGRPSW
NWQGTAVFASTSDGITEFYLDNSAPKVISPLSMAVGFAKSATELVFSRYGVNGLWLINLAQPEEVTQLISSKVFRSGNNW
AMTADGVYFKSSNGNEQRLNYWEASSQQVTPLLRVPRSSLSGFGSMTYIPESNRLVMTLDGFPQRDIILLKHKLLQ

Sequences:

>Translated_716_residues
MKDKSKLGFYLGSCRIDPSDNSILFQTQGDETSSNESAKVSLQPKFIEVLSYLALRYPHVVTRDELITQVWEGNAYVGTK
ALTNAIWHLRQQLLPLDVDGGVIETVRKAGYRLLLPPIYDQLDDTEEDLRQTTETKLQHANQRLRLMAMVLGAVAVVSSL
FIGMHLYQDKQRMTDTQMTVLTRDPGSERYPRLSHDRRWLVYGASRPGVTSSLYLKDFKREDVPARQLTPSTSVELRAVW
SLDDTKLFFASRSHATGKCTITQLTLATNEMLALAPCSTDMAAIDISPDGQYLAYISSHEADKVGGIYRLTLAKADATAE
RLSCESQCNYEDRDLAFSPDGKWLAIARRFSNISEDIFIRDLANANEKRLTQGLEDIRGLSWTPNSQALVFATEDSGSRN
GFTIDIETAHIRPLDVEGMSYPSSVSDEGELVYHQYRRQFQMAYFSLGDKVPGSLFPLLYSGISHRNPHYSPEAGRIVFV
SSDTGYNEIWTSDIKGQKLEQHTQLKSRVAYPRWSPDGSKIAFIAPDDRNEGNRIFILDLTNKNITALASSYHNHGRPSW
NWQGTAVFASTSDGITEFYLDNSAPKVISPLSMAVGFAKSATELVFSRYGVNGLWLINLAQPEEVTQLISSKVFRSGNNW
AMTADGVYFKSSNGNEQRLNYWEASSQQVTPLLRVPRSSLSGFGSMTYIPESNRLVMTLDGFPQRDIILLKHKLLQ
>Mature_716_residues
MKDKSKLGFYLGSCRIDPSDNSILFQTQGDETSSNESAKVSLQPKFIEVLSYLALRYPHVVTRDELITQVWEGNAYVGTK
ALTNAIWHLRQQLLPLDVDGGVIETVRKAGYRLLLPPIYDQLDDTEEDLRQTTETKLQHANQRLRLMAMVLGAVAVVSSL
FIGMHLYQDKQRMTDTQMTVLTRDPGSERYPRLSHDRRWLVYGASRPGVTSSLYLKDFKREDVPARQLTPSTSVELRAVW
SLDDTKLFFASRSHATGKCTITQLTLATNEMLALAPCSTDMAAIDISPDGQYLAYISSHEADKVGGIYRLTLAKADATAE
RLSCESQCNYEDRDLAFSPDGKWLAIARRFSNISEDIFIRDLANANEKRLTQGLEDIRGLSWTPNSQALVFATEDSGSRN
GFTIDIETAHIRPLDVEGMSYPSSVSDEGELVYHQYRRQFQMAYFSLGDKVPGSLFPLLYSGISHRNPHYSPEAGRIVFV
SSDTGYNEIWTSDIKGQKLEQHTQLKSRVAYPRWSPDGSKIAFIAPDDRNEGNRIFILDLTNKNITALASSYHNHGRPSW
NWQGTAVFASTSDGITEFYLDNSAPKVISPLSMAVGFAKSATELVFSRYGVNGLWLINLAQPEEVTQLISSKVFRSGNNW
AMTADGVYFKSSNGNEQRLNYWEASSQQVTPLLRVPRSSLSGFGSMTYIPESNRLVMTLDGFPQRDIILLKHKLLQ

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80355; Mature: 80355

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKSKLGFYLGSCRIDPSDNSILFQTQGDETSSNESAKVSLQPKFIEVLSYLALRYPHV
CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCC
VTRDELITQVWEGNAYVGTKALTNAIWHLRQQLLPLDVDGGVIETVRKAGYRLLLPPIYD
CCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCHHHH
QLDDTEEDLRQTTETKLQHANQRLRLMAMVLGAVAVVSSLFIGMHLYQDKQRMTDTQMTV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LTRDPGSERYPRLSHDRRWLVYGASRPGVTSSLYLKDFKREDVPARQLTPSTSVELRAVW
EEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCHHHCCCCCCEEEEEEE
SLDDTKLFFASRSHATGKCTITQLTLATNEMLALAPCSTDMAAIDISPDGQYLAYISSHE
ECCCCEEEEEECCCCCCEEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCEEEEEECCC
ADKVGGIYRLTLAKADATAERLSCESQCNYEDRDLAFSPDGKWLAIARRFSNISEDIFIR
CCCCCCEEEEEEECCCCHHHHHCCHHCCCCCCCCEEECCCCCEEEEEHHHCCCCHHEEEH
DLANANEKRLTQGLEDIRGLSWTPNSQALVFATEDSGSRNGFTIDIETAHIRPLDVEGMS
HHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECEEEEECCCCCC
YPSSVSDEGELVYHQYRRQFQMAYFSLGDKVPGSLFPLLYSGISHRNPHYSPEAGRIVFV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE
SSDTGYNEIWTSDIKGQKLEQHTQLKSRVAYPRWSPDGSKIAFIAPDDRNEGNRIFILDL
ECCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEE
TNKNITALASSYHNHGRPSWNWQGTAVFASTSDGITEFYLDNSAPKVISPLSMAVGFAKS
CCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHH
ATELVFSRYGVNGLWLINLAQPEEVTQLISSKVFRSGNNWAMTADGVYFKSSNGNEQRLN
HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCHHHCE
YWEASSQQVTPLLRVPRSSLSGFGSMTYIPESNRLVMTLDGFPQRDIILLKHKLLQ
EECCCCCCCCHHHHCCCHHHCCCCCEEEECCCCEEEEEECCCCCCCEEEHHHHHCC
>Mature Secondary Structure
MKDKSKLGFYLGSCRIDPSDNSILFQTQGDETSSNESAKVSLQPKFIEVLSYLALRYPHV
CCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCC
VTRDELITQVWEGNAYVGTKALTNAIWHLRQQLLPLDVDGGVIETVRKAGYRLLLPPIYD
CCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCHHHH
QLDDTEEDLRQTTETKLQHANQRLRLMAMVLGAVAVVSSLFIGMHLYQDKQRMTDTQMTV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LTRDPGSERYPRLSHDRRWLVYGASRPGVTSSLYLKDFKREDVPARQLTPSTSVELRAVW
EEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCHHHCCCCCCEEEEEEE
SLDDTKLFFASRSHATGKCTITQLTLATNEMLALAPCSTDMAAIDISPDGQYLAYISSHE
ECCCCEEEEEECCCCCCEEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCEEEEEECCC
ADKVGGIYRLTLAKADATAERLSCESQCNYEDRDLAFSPDGKWLAIARRFSNISEDIFIR
CCCCCCEEEEEEECCCCHHHHHCCHHCCCCCCCCEEECCCCCEEEEEHHHCCCCHHEEEH
DLANANEKRLTQGLEDIRGLSWTPNSQALVFATEDSGSRNGFTIDIETAHIRPLDVEGMS
HHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECEEEEECCCCCC
YPSSVSDEGELVYHQYRRQFQMAYFSLGDKVPGSLFPLLYSGISHRNPHYSPEAGRIVFV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE
SSDTGYNEIWTSDIKGQKLEQHTQLKSRVAYPRWSPDGSKIAFIAPDDRNEGNRIFILDL
ECCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEE
TNKNITALASSYHNHGRPSWNWQGTAVFASTSDGITEFYLDNSAPKVISPLSMAVGFAKS
CCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHH
ATELVFSRYGVNGLWLINLAQPEEVTQLISSKVFRSGNNWAMTADGVYFKSSNGNEQRLN
HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCHHHCE
YWEASSQQVTPLLRVPRSSLSGFGSMTYIPESNRLVMTLDGFPQRDIILLKHKLLQ
EECCCCCCCCHHHHCCCHHHCCCCCEEEECCCCEEEEEECCCCCCCEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA