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The map label for this gene is estR [H]

Identifier: 117921485

GI number: 117921485

Start: 3651019

End: 3651930

Strand: Reverse

Name: estR [H]

Synonym: Shewana3_3046

Alternate gene names: 117921485

Gene position: 3651930-3651019 (Counterclockwise)

Preceding gene: 117921486

Following gene: 117921482

Centisome position: 73.45

GC content: 45.83

Gene sequence:

>912_bases
ATGAAAAATTTACCTAGCCTTAAGAATTTATTCTATTTGGTGAACCTTCACCAAGAGCAGAATTTTAACCGCGCCGCTAA
GGTGTGTTTTGTCAGTCAATCAACGCTGTCGAGCGGGATCCAGAATCTTGAAGAACAGCTTGGCCATCAATTGATTGAAC
GTGATCATAAATCCTTTATGTTCACCGCTATAGGTGAAGAAGTGGTGCAGCGTTCCCGCAAAATCCTGACAGATGTGGAT
GATTTAGTCGAACTGGTGAAAAACCAGGGCGAACCTATGACTGGGGATATCCGCTTAGGTTGTATTCCAACCATTGCGCC
ATTTTTATTAAGCCGTGTGGTTAAGCAATGTCAGCAAGCTTATCCGGCGATGAGTTTGTTACTCAAAGAAGATACCACTG
AGCGTTTGCTCGATGCCTTAGGTAAAGGGGAGTTGGACTTACTTATCCTCGCCTTGCCCGTGGATACCAGTGGTTACCAT
AGCATGAAAGTCGGGATAGACCCCTTTAAGATGGTGATCCATAAAGACTTAGTGGGTGGCATTCATCAGCCTATCGATTA
TCAGACCTTGCCCGATGAGAGTATCTTCCTGCTGCAGAGTGAGCACTGCATTACAGGGCATGCAATTACCGCTTGTCAGT
TAGGTGACAGCGCGAAAGTGAATCCCTTTGCCGCGACCAGTCTGCACACTTTAGTGCAAATGGTGGATAGCAAGTTGGGC
ACTACCTTCTTACCGCAAATGGCGATCGATGCTGGCATCTTAAATGATACCGATCTAGTGGTGATGACTCCGCCAGGTGA
AGCGCCTTACCGTGATATCGGCTTAGTTTGGCGACAAACAACCAGCCGGATTTTGACCTTCCGTACCTTAGGTTTGCTTA
TTCAAAAGCTATTAACCAAAGAAATCGAATAA

Upstream 100 bases:

>100_bases
TTTGCTCACAGTATTGAGCAATTCAGCCGCGTTTTAGTTGATAACTTATGCTAGAGTTGATTAAATTTATTAATTCATAA
CCTTAGTGGCAATCGATTAA

Downstream 100 bases:

>100_bases
TCGCTGTAAGTTAAAATAGCTAGGATATTAGAGAGGGGAAACACCAAACACTTCAATCGAGTGTTGTTTCCCCTTTAATT
TGACTGGACCCAAATTGGTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Esterase operon transcriptional regulator [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKNLPSLKNLFYLVNLHQEQNFNRAAKVCFVSQSTLSSGIQNLEEQLGHQLIERDHKSFMFTAIGEEVVQRSRKILTDVD
DLVELVKNQGEPMTGDIRLGCIPTIAPFLLSRVVKQCQQAYPAMSLLLKEDTTERLLDALGKGELDLLILALPVDTSGYH
SMKVGIDPFKMVIHKDLVGGIHQPIDYQTLPDESIFLLQSEHCITGHAITACQLGDSAKVNPFAATSLHTLVQMVDSKLG
TTFLPQMAIDAGILNDTDLVVMTPPGEAPYRDIGLVWRQTTSRILTFRTLGLLIQKLLTKEIE

Sequences:

>Translated_303_residues
MKNLPSLKNLFYLVNLHQEQNFNRAAKVCFVSQSTLSSGIQNLEEQLGHQLIERDHKSFMFTAIGEEVVQRSRKILTDVD
DLVELVKNQGEPMTGDIRLGCIPTIAPFLLSRVVKQCQQAYPAMSLLLKEDTTERLLDALGKGELDLLILALPVDTSGYH
SMKVGIDPFKMVIHKDLVGGIHQPIDYQTLPDESIFLLQSEHCITGHAITACQLGDSAKVNPFAATSLHTLVQMVDSKLG
TTFLPQMAIDAGILNDTDLVVMTPPGEAPYRDIGLVWRQTTSRILTFRTLGLLIQKLLTKEIE
>Mature_303_residues
MKNLPSLKNLFYLVNLHQEQNFNRAAKVCFVSQSTLSSGIQNLEEQLGHQLIERDHKSFMFTAIGEEVVQRSRKILTDVD
DLVELVKNQGEPMTGDIRLGCIPTIAPFLLSRVVKQCQQAYPAMSLLLKEDTTERLLDALGKGELDLLILALPVDTSGYH
SMKVGIDPFKMVIHKDLVGGIHQPIDYQTLPDESIFLLQSEHCITGHAITACQLGDSAKVNPFAATSLHTLVQMVDSKLG
TTFLPQMAIDAGILNDTDLVVMTPPGEAPYRDIGLVWRQTTSRILTFRTLGLLIQKLLTKEIE

Specific function: Transcriptional regulator of the esterase operon [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=274, Percent_Identity=34.6715328467153, Blast_Score=161, Evalue=4e-41,
Organism=Escherichia coli, GI157672245, Length=241, Percent_Identity=23.6514522821577, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787879, Length=154, Percent_Identity=35.7142857142857, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788748, Length=245, Percent_Identity=22.4489795918367, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI145693105, Length=245, Percent_Identity=23.6734693877551, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI2367136, Length=200, Percent_Identity=26.5, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787530, Length=145, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790208, Length=152, Percent_Identity=28.9473684210526, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1789639, Length=272, Percent_Identity=24.2647058823529, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33677; Mature: 33677

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLPSLKNLFYLVNLHQEQNFNRAAKVCFVSQSTLSSGIQNLEEQLGHQLIERDHKSFM
CCCCCCHHHHEEEEECHHHCCCCHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTAIGEEVVQRSRKILTDVDDLVELVKNQGEPMTGDIRLGCIPTIAPFLLSRVVKQCQQA
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH
YPAMSLLLKEDTTERLLDALGKGELDLLILALPVDTSGYHSMKVGIDPFKMVIHKDLVGG
HHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHH
IHQPIDYQTLPDESIFLLQSEHCITGHAITACQLGDSAKVNPFAATSLHTLVQMVDSKLG
CCCCCCCCCCCCCCEEEEECCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
TTFLPQMAIDAGILNDTDLVVMTPPGEAPYRDIGLVWRQTTSRILTFRTLGLLIQKLLTK
CHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIE
CCC
>Mature Secondary Structure
MKNLPSLKNLFYLVNLHQEQNFNRAAKVCFVSQSTLSSGIQNLEEQLGHQLIERDHKSFM
CCCCCCHHHHEEEEECHHHCCCCHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTAIGEEVVQRSRKILTDVDDLVELVKNQGEPMTGDIRLGCIPTIAPFLLSRVVKQCQQA
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH
YPAMSLLLKEDTTERLLDALGKGELDLLILALPVDTSGYHSMKVGIDPFKMVIHKDLVGG
HHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHH
IHQPIDYQTLPDESIFLLQSEHCITGHAITACQLGDSAKVNPFAATSLHTLVQMVDSKLG
CCCCCCCCCCCCCCEEEEECCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
TTFLPQMAIDAGILNDTDLVVMTPPGEAPYRDIGLVWRQTTSRILTFRTLGLLIQKLLTK
CHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA