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The map label for this gene is ygfY [C]

Identifier: 117921474

GI number: 117921474

Start: 3640138

End: 3640377

Strand: Reverse

Name: ygfY [C]

Synonym: Shewana3_3035

Alternate gene names: 117921474

Gene position: 3640377-3640138 (Counterclockwise)

Preceding gene: 117921475

Following gene: 117921473

Centisome position: 73.21

GC content: 52.5

Gene sequence:

>240_bases
ATGAACATTGCACGGGTCCGCTGGGCATGTCGCCGCGGAATGCTCGAATTGGACGTCTTGTTCCAGCCTTTCGTCGAAAA
TGTTTATCAGGATTTGTCGGATGACGACAAGGCCCTGTTTATTCGTTTACTCGAGTGTGAAGACCCTGAATTATTTGCTT
GGTTTATGGGTCATGAAGCCTGTCCCGATGCCGAGCTTGCCCGCATGGTAGTGCAAGTCCGTGGCAGAGCGGCGCCATAG

Upstream 100 bases:

>100_bases
CGGTGCTAAACCGAGTTTCAATACGGCTTGCATCGACACTCTACGGCGTGAACTGGTAAACTAGGGCGAAATTTGTTTTG
GGAGAATTAACTTGGAGTTA

Downstream 100 bases:

>100_bases
TTTTAGCGTAAAAGCCTCTAGCGACCAGCGACTCTCGTTGGTCGTTTTTGTTTGTGTCTGCAGTACCTCTTTACTTATCT
GGCCTGAAACGGACGTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MNIARVRWACRRGMLELDVLFQPFVENVYQDLSDDDKALFIRLLECEDPELFAWFMGHEACPDAELARMVVQVRGRAAP

Sequences:

>Translated_79_residues
MNIARVRWACRRGMLELDVLFQPFVENVYQDLSDDDKALFIRLLECEDPELFAWFMGHEACPDAELARMVVQVRGRAAP
>Mature_79_residues
MNIARVRWACRRGMLELDVLFQPFVENVYQDLSDDDKALFIRLLECEDPELFAWFMGHEACPDAELARMVVQVRGRAAP

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0350 family [H]

Homologues:

Organism=Escherichia coli, GI1789264, Length=77, Percent_Identity=58.4415584415584, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005631 [H]

Pfam domain/function: PF03937 DUF339 [H]

EC number: NA

Molecular weight: Translated: 9186; Mature: 9186

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIARVRWACRRGMLELDVLFQPFVENVYQDLSDDDKALFIRLLECEDPELFAWFMGHEA
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCCC
CPDAELARMVVQVRGRAAP
CCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIARVRWACRRGMLELDVLFQPFVENVYQDLSDDDKALFIRLLECEDPELFAWFMGHEA
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCCC
CPDAELARMVVQVRGRAAP
CCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]