Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921414

Identifier: 117921414

GI number: 117921414

Start: 3576515

End: 3577429

Strand: Reverse

Name: 117921414

Synonym: Shewana3_2975

Alternate gene names: NA

Gene position: 3577429-3576515 (Counterclockwise)

Preceding gene: 117921419

Following gene: 117921413

Centisome position: 71.95

GC content: 47.65

Gene sequence:

>915_bases
GTGAAATATTTGCTGACCTATTTTAAGGGAATGGCCATGGGGGCCGCCGATGTGGTGCCTGGGGTTTCGGGTGGCACTAT
CGCCTTTATCACCGGTATTCTCGATACCCTGCTTGAAAGCGTTAAACGTATTAATCCGTCCCTTTGGGGCGTGATTAAGT
CGCAGGGGATTAAAGGTGCGTTTGAACATATCAATGGCGGATTTTTACTGAGCCTATTAGCGGGCATCCTAACCAGTATT
TTTACCTTCGCTAAACTGATTTCTTGGTTGCTGGTGGCCCATCCCATTCCGATTTGGTCATTCTTCTTTGGCCTCATCAT
CATCTCTGTGGTGCACATGCTTAAACAGGTGAGTGGTTTTACGCTGGCGCGTTTGGGATTATTCGCCTTAGGGGTTTTGG
CTGCTTGGGTGATCACTGTACTGAACCCTGTGTCGGTCGAGGCCAGCTATTTAAATATTTTCTTCGGCGGTGCGATTGCC
ATTTGTGCCATGGTATTACCGGGGATTTCGGGCAGTTTTATCTTATTATTGCTCGGCTTATATCCAGTGGTACTCGCGGC
GGCAAAAAATATCCAAATCGATATTTTGGCCTGTTTTGCCGTAGGCGCTTTGCTGGGGATTTTAAGCTTTAGCCATTTAC
TCTCGGCCTTGCTGCGTAAATACCATGATGCGACCGTAGTGTTTCTCACGGGCTTGATGCTCGGCACCTTAGGTAAAATT
TGGCCTTGGAAACAAACCTTAACGTGGCGTACTAACTCCCACGGTGAACAAGTGCCGCTATTGGAGCAAAATATTTCGCC
GCTAAATTTTGAACAAGTGACGGGCCAACCTTCACAGCTGATGTTAGCTATCGTGTGTATGTTGGCGGCCATTGCCTTAG
TTTGGGGTTTAGAGAAGGTCGGCAAACGGGATTAA

Upstream 100 bases:

>100_bases
TAAGTAAACTTCATTTCGCGGTTTTTACGCTAACACCGTATAATCACGACAAATTTGTCATCAATGACACGTCATAATGA
TTTAACTACAAGGACTCACA

Downstream 100 bases:

>100_bases
GTCAATCCTGTGGATGATGTGAATAAAAGCAGCGATATTCGCTGCTTTTATGTTTTAAGGCCAATGGAATGTCCTCGACT
TTTGGGCAATGTTATTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLESVKRINPSLWGVIKSQGIKGAFEHINGGFLLSLLAGILTSI
FTFAKLISWLLVAHPIPIWSFFFGLIIISVVHMLKQVSGFTLARLGLFALGVLAAWVITVLNPVSVEASYLNIFFGGAIA
ICAMVLPGISGSFILLLLGLYPVVLAAAKNIQIDILACFAVGALLGILSFSHLLSALLRKYHDATVVFLTGLMLGTLGKI
WPWKQTLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLMLAIVCMLAAIALVWGLEKVGKRD

Sequences:

>Translated_304_residues
MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLESVKRINPSLWGVIKSQGIKGAFEHINGGFLLSLLAGILTSI
FTFAKLISWLLVAHPIPIWSFFFGLIIISVVHMLKQVSGFTLARLGLFALGVLAAWVITVLNPVSVEASYLNIFFGGAIA
ICAMVLPGISGSFILLLLGLYPVVLAAAKNIQIDILACFAVGALLGILSFSHLLSALLRKYHDATVVFLTGLMLGTLGKI
WPWKQTLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLMLAIVCMLAAIALVWGLEKVGKRD
>Mature_304_residues
MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLESVKRINPSLWGVIKSQGIKGAFEHINGGFLLSLLAGILTSI
FTFAKLISWLLVAHPIPIWSFFFGLIIISVVHMLKQVSGFTLARLGLFALGVLAAWVITVLNPVSVEASYLNIFFGGAIA
ICAMVLPGISGSFILLLLGLYPVVLAAAKNIQIDILACFAVGALLGILSFSHLLSALLRKYHDATVVFLTGLMLGTLGKI
WPWKQTLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLMLAIVCMLAAIALVWGLEKVGKRD

Specific function: Unknown

COG id: COG2035

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32707; Mature: 32707

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLESVKRINPSLWGVIKSQGIKGA
CHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHH
FEHINGGFLLSLLAGILTSIFTFAKLISWLLVAHPIPIWSFFFGLIIISVVHMLKQVSGF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
TLARLGLFALGVLAAWVITVLNPVSVEASYLNIFFGGAIAICAMVLPGISGSFILLLLGL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YPVVLAAAKNIQIDILACFAVGALLGILSFSHLLSALLRKYHDATVVFLTGLMLGTLGKI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
WPWKQTLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLMLAIVCMLAAIALVWGLEKV
CCCCHHEEECCCCCCCCCCHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GKRD
CCCC
>Mature Secondary Structure
MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLESVKRINPSLWGVIKSQGIKGA
CHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHH
FEHINGGFLLSLLAGILTSIFTFAKLISWLLVAHPIPIWSFFFGLIIISVVHMLKQVSGF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
TLARLGLFALGVLAAWVITVLNPVSVEASYLNIFFGGAIAICAMVLPGISGSFILLLLGL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YPVVLAAAKNIQIDILACFAVGALLGILSFSHLLSALLRKYHDATVVFLTGLMLGTLGKI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
WPWKQTLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLMLAIVCMLAAIALVWGLEKV
CCCCHHEEECCCCCCCCCCHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GKRD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA