Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921362

Identifier: 117921362

GI number: 117921362

Start: 3500984

End: 3502495

Strand: Reverse

Name: 117921362

Synonym: Shewana3_2922

Alternate gene names: NA

Gene position: 3502495-3500984 (Counterclockwise)

Preceding gene: 117921363

Following gene: 117921350

Centisome position: 70.44

GC content: 47.35

Gene sequence:

>1512_bases
ATGCGCACCGCTGCAGTCATCTCTATGCTGTTGTTTGGCGTGTTAACCAGTGTTAATGCCAGTGCCAAGGATAATGAGCT
AGTGTTTGCTAGCGATTTTGAGGGTAACCGCTTATCCCAACCTTGGTCTTGGATCATGGGCTGCCAATTTGAGGGCGCAG
AGCCCCACAGTGGTGAGAGCGCATTGTTATGTGCCGAAGGCAATAGCAGTATCGTCAGTAAATTCCCCGTCTCCGAAGCG
GGTCTGTTGGAGTTTTGGGTCAAGACTCAAAATATCCAAACCCAATATCGCATTAATGTACTCACATCGCCAGTATTAAA
ACTGGATGCTCAGTGGCAGCATGTGGCGCTGATCGATATTACTCCTGCGACTACCGAATATTTGGCCCACAGGGTGTCGA
TTGACGATCCGAGCCGCCAGTATATTCGCCTCGATATCGAAGCCATCAATGGCCCCATCAGTTTGGATGACTTAACCTTA
GATAAAATTCGCCTCGATATCGCGCTGCAAAAAAACGAGCAAAAAATCATTGGCGGCATTTTAGATAAGCTCAAAGAAGA
CAAAAACTACGAGGTTCAGGCCGAATCCTTTAGAACCTTGGGTAAAAATTACGCTGCCCAGCTCGAAAGCCAAAGACAGT
ACCTCGAGTATTCCAATGCGATTTACTCGAGCATCACCTTTGTATTGGCGACTTCTGAACGTAATAAAATGTCTAACCCA
TTGGGTTATAACACCTTTAGGTCGGTCTTAACCGATGCTAAGCGGGTGGCATCGCCGATTCAACAGGCGCGTTTAGGCTC
TATGGTCAAACCCTTTGGTGACTTAGCTACCGCCACCTTAAATGTGGTAAGTGCGGGCGCATATTCGGCATTTGCCGAAC
CCTTTAAATCTTTCCTGGCGGCCACCTTCGACCGCTCAAACTATGACAACAGCGACTTAAGCCGCAGTGATAAAAAGTTT
GCCGAGGAAAACGGCCTTAAGATTTATCAGCAAGCCGAACGCTTTATGGCTGAAATCGAAAAAGAGTTGCAACAGGTGAC
GGCGCTCGATAACGATTTAGTCAATATGCAGAAGAACTTAGATACTTTCCGTAAGGATTTAGATAAGCATCTGCGTAGCT
ATCTACAGCATGCCAGCATTGCCCGTACGCCCGAAAACTACAGTAAGGTGATGAGTAAAGATGAGCAAACGCGGGCACAG
ATTATGGCCGATGTGAATGCCAATATCAGCGCCAAGGCCGACGCCTTATTAGCCGCAAATAGCAATGCCGAGCTAGTGCA
ATACATGATTAAAACGACTGAAAAAATGGATGAGTTTCAGGAGTTTAAGGAGCGATTCAATCAAATCACCTCGGCGATGT
TAACCTTCTACGATCGCTTTGAGCGCTCGATTGCCGCCGAGCAAAACCCATTCACCGACCCAAGCGATAGGGCGGTATGG
GAGCAACATGCCCAAAGTGCGCGCAACTATATTCGCCAATCGAAGGAAGCCTTTACTAAGGCCTTTATGTAG

Upstream 100 bases:

>100_bases
TAAAATACGGCGGCCGACTGACGGTAAAAGCGTGTGGATAGGATAGAATTCTGGGCCTTTTCAGGCTCGTCGTTTGTTAT
TTATGTTTTATGAGGCTCTT

Downstream 100 bases:

>100_bases
CGGATGCTTATCGCCAAGTGGTCGTAATGGTCTCAGTCACTTGGCTTTTTCGATTTTTCTTTGGGGTTATTAAGGATAAA
ACAGGGCGTCAGAAGCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MRTAAVISMLLFGVLTSVNASAKDNELVFASDFEGNRLSQPWSWIMGCQFEGAEPHSGESALLCAEGNSSIVSKFPVSEA
GLLEFWVKTQNIQTQYRINVLTSPVLKLDAQWQHVALIDITPATTEYLAHRVSIDDPSRQYIRLDIEAINGPISLDDLTL
DKIRLDIALQKNEQKIIGGILDKLKEDKNYEVQAESFRTLGKNYAAQLESQRQYLEYSNAIYSSITFVLATSERNKMSNP
LGYNTFRSVLTDAKRVASPIQQARLGSMVKPFGDLATATLNVVSAGAYSAFAEPFKSFLAATFDRSNYDNSDLSRSDKKF
AEENGLKIYQQAERFMAEIEKELQQVTALDNDLVNMQKNLDTFRKDLDKHLRSYLQHASIARTPENYSKVMSKDEQTRAQ
IMADVNANISAKADALLAANSNAELVQYMIKTTEKMDEFQEFKERFNQITSAMLTFYDRFERSIAAEQNPFTDPSDRAVW
EQHAQSARNYIRQSKEAFTKAFM

Sequences:

>Translated_503_residues
MRTAAVISMLLFGVLTSVNASAKDNELVFASDFEGNRLSQPWSWIMGCQFEGAEPHSGESALLCAEGNSSIVSKFPVSEA
GLLEFWVKTQNIQTQYRINVLTSPVLKLDAQWQHVALIDITPATTEYLAHRVSIDDPSRQYIRLDIEAINGPISLDDLTL
DKIRLDIALQKNEQKIIGGILDKLKEDKNYEVQAESFRTLGKNYAAQLESQRQYLEYSNAIYSSITFVLATSERNKMSNP
LGYNTFRSVLTDAKRVASPIQQARLGSMVKPFGDLATATLNVVSAGAYSAFAEPFKSFLAATFDRSNYDNSDLSRSDKKF
AEENGLKIYQQAERFMAEIEKELQQVTALDNDLVNMQKNLDTFRKDLDKHLRSYLQHASIARTPENYSKVMSKDEQTRAQ
IMADVNANISAKADALLAANSNAELVQYMIKTTEKMDEFQEFKERFNQITSAMLTFYDRFERSIAAEQNPFTDPSDRAVW
EQHAQSARNYIRQSKEAFTKAFM
>Mature_503_residues
MRTAAVISMLLFGVLTSVNASAKDNELVFASDFEGNRLSQPWSWIMGCQFEGAEPHSGESALLCAEGNSSIVSKFPVSEA
GLLEFWVKTQNIQTQYRINVLTSPVLKLDAQWQHVALIDITPATTEYLAHRVSIDDPSRQYIRLDIEAINGPISLDDLTL
DKIRLDIALQKNEQKIIGGILDKLKEDKNYEVQAESFRTLGKNYAAQLESQRQYLEYSNAIYSSITFVLATSERNKMSNP
LGYNTFRSVLTDAKRVASPIQQARLGSMVKPFGDLATATLNVVSAGAYSAFAEPFKSFLAATFDRSNYDNSDLSRSDKKF
AEENGLKIYQQAERFMAEIEKELQQVTALDNDLVNMQKNLDTFRKDLDKHLRSYLQHASIARTPENYSKVMSKDEQTRAQ
IMADVNANISAKADALLAANSNAELVQYMIKTTEKMDEFQEFKERFNQITSAMLTFYDRFERSIAAEQNPFTDPSDRAVW
EQHAQSARNYIRQSKEAFTKAFM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56837; Mature: 56837

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAAVISMLLFGVLTSVNASAKDNELVFASDFEGNRLSQPWSWIMGCQFEGAEPHSGES
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCEECCCCCCCCCC
ALLCAEGNSSIVSKFPVSEAGLLEFWVKTQNIQTQYRINVLTSPVLKLDAQWQHVALIDI
EEEEECCCCCHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEHHCCHHHCCCCCCEEEEEEE
TPATTEYLAHRVSIDDPSRQYIRLDIEAINGPISLDDLTLDKIRLDIALQKNEQKIIGGI
CCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHEEEEEEEECCCHHHHHHH
LDKLKEDKNYEVQAESFRTLGKNYAAQLESQRQYLEYSNAIYSSITFVLATSERNKMSNP
HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC
LGYNTFRSVLTDAKRVASPIQQARLGSMVKPFGDLATATLNVVSAGAYSAFAEPFKSFLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATFDRSNYDNSDLSRSDKKFAEENGLKIYQQAERFMAEIEKELQQVTALDNDLVNMQKNL
HHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTFRKDLDKHLRSYLQHASIARTPENYSKVMSKDEQTRAQIMADVNANISAKADALLAAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECC
SNAELVQYMIKTTEKMDEFQEFKERFNQITSAMLTFYDRFERSIAAEQNPFTDPSDRAVW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EQHAQSARNYIRQSKEAFTKAFM
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTAAVISMLLFGVLTSVNASAKDNELVFASDFEGNRLSQPWSWIMGCQFEGAEPHSGES
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCEECCCCCCCCCC
ALLCAEGNSSIVSKFPVSEAGLLEFWVKTQNIQTQYRINVLTSPVLKLDAQWQHVALIDI
EEEEECCCCCHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEHHCCHHHCCCCCCEEEEEEE
TPATTEYLAHRVSIDDPSRQYIRLDIEAINGPISLDDLTLDKIRLDIALQKNEQKIIGGI
CCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHEEEEEEEECCCHHHHHHH
LDKLKEDKNYEVQAESFRTLGKNYAAQLESQRQYLEYSNAIYSSITFVLATSERNKMSNP
HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC
LGYNTFRSVLTDAKRVASPIQQARLGSMVKPFGDLATATLNVVSAGAYSAFAEPFKSFLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATFDRSNYDNSDLSRSDKKFAEENGLKIYQQAERFMAEIEKELQQVTALDNDLVNMQKNL
HHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTFRKDLDKHLRSYLQHASIARTPENYSKVMSKDEQTRAQIMADVNANISAKADALLAAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECC
SNAELVQYMIKTTEKMDEFQEFKERFNQITSAMLTFYDRFERSIAAEQNPFTDPSDRAVW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EQHAQSARNYIRQSKEAFTKAFM
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA