| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is ppnK [H]
Identifier: 117921344
GI number: 117921344
Start: 3472655
End: 3473584
Strand: Direct
Name: ppnK [H]
Synonym: Shewana3_2903
Alternate gene names: 117921344
Gene position: 3472655-3473584 (Clockwise)
Preceding gene: 117921342
Following gene: 117921345
Centisome position: 69.84
GC content: 51.29
Gene sequence:
>930_bases ATGGGGATCAATTTTGACGTTTCAAGGCCTAAGGCCAGATCTAGCATAAATATGACCACAAAGTTCCACACCATTGGCCT GATTGGCAAGCCGCACCACCCAGGGACAAATCAAACCCTCAAACGTCTGCACCACTGGCTGACGGTGCAAGGGTATGAAG TCCTCGTGGAAGAGCGCGTTGCCAGCGAGTTAGGGACCAATATCATCGCGGTCGATTTATTAGAGATTGGCGCACGCTGC GATTTAGCGATAGTCGTGGGTGGCGATGGCAATATGCTCGGCGCCGCCAGAGTGCTGGCCCGCTTCGATGTGGGCGTGAT TGGTGTAAACCGTGGCAATCTAGGTTTTTTAACGGATTTACCGCCCGATGCCTTTGAAGAAGCGCTCGCCAAAGTGCTCG ATGGGGAATTTGATACCGAGCACCGCTTTTTACTCGAAGCCGAGGTCTATCGTCACGGCATGTTAAAAGCGAGCAATACC GCAGTGAATGAGGCAGTGCTGCATCCTGGTAAAATCGCCCATATGATTGAATTTGAAGTCTATATAGACAATCAATTCAT GTACAGTCAACGTGCCGACGGCATGATAGTCTCAACCCCGACGGGGTCTACCGCCTATGCCCTGTCGGCAGGTGGCGCCA TTCTGACCCCCAATTTACAGGCATTAATCTTAGTGCCTATGTTTCCACATACACTGTCGTGTCGCCCCATAGTGGTCGAT GCCTGCAGCACCATTAAGATGGTCGTCTCCCCTGAAAATGGCGAAAATCTCGAAGTAAGTTGTGATGGCCACGTGCATTT AGCCGTCTTACCCGGCGATGAAATCATAGTGCGCCGCAGCTCCGAGCAGCTCAGACTTATCCACCCTAAAGGCCATAATT ACTTCCATGTGTTACGCAGTAAGCTCGGCTGGGGCAGTAAGCTGTTTTAA
Upstream 100 bases:
>100_bases CTACACCCTCTTGGATCAGATCCTGTTCTGCTTTAATCGACTCGTTGCTCATTTTCACTCCAGCTAAAAATGCTTTGTTT CTAAATACTCTGGGCATATT
Downstream 100 bases:
>100_bases GCCCACATTAGGCGAAGGCATAATGGCCACAAAGGCACGCCATCATTAATCACTCAGGTTAATTCCCATACCAGTTGTTA ACAGAATGGTGTGTTGCGGC
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MGINFDVSRPKARSSINMTTKFHTIGLIGKPHHPGTNQTLKRLHHWLTVQGYEVLVEERVASELGTNIIAVDLLEIGARC DLAIVVGGDGNMLGAARVLARFDVGVIGVNRGNLGFLTDLPPDAFEEALAKVLDGEFDTEHRFLLEAEVYRHGMLKASNT AVNEAVLHPGKIAHMIEFEVYIDNQFMYSQRADGMIVSTPTGSTAYALSAGGAILTPNLQALILVPMFPHTLSCRPIVVD ACSTIKMVVSPENGENLEVSCDGHVHLAVLPGDEIIVRRSSEQLRLIHPKGHNYFHVLRSKLGWGSKLF
Sequences:
>Translated_309_residues MGINFDVSRPKARSSINMTTKFHTIGLIGKPHHPGTNQTLKRLHHWLTVQGYEVLVEERVASELGTNIIAVDLLEIGARC DLAIVVGGDGNMLGAARVLARFDVGVIGVNRGNLGFLTDLPPDAFEEALAKVLDGEFDTEHRFLLEAEVYRHGMLKASNT AVNEAVLHPGKIAHMIEFEVYIDNQFMYSQRADGMIVSTPTGSTAYALSAGGAILTPNLQALILVPMFPHTLSCRPIVVD ACSTIKMVVSPENGENLEVSCDGHVHLAVLPGDEIIVRRSSEQLRLIHPKGHNYFHVLRSKLGWGSKLF >Mature_308_residues GINFDVSRPKARSSINMTTKFHTIGLIGKPHHPGTNQTLKRLHHWLTVQGYEVLVEERVASELGTNIIAVDLLEIGARCD LAIVVGGDGNMLGAARVLARFDVGVIGVNRGNLGFLTDLPPDAFEEALAKVLDGEFDTEHRFLLEAEVYRHGMLKASNTA VNEAVLHPGKIAHMIEFEVYIDNQFMYSQRADGMIVSTPTGSTAYALSAGGAILTPNLQALILVPMFPHTLSCRPIVVDA CSTIKMVVSPENGENLEVSCDGHVHLAVLPGDEIIVRRSSEQLRLIHPKGHNYFHVLRSKLGWGSKLF
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Homo sapiens, GI55743112, Length=263, Percent_Identity=31.1787072243346, Blast_Score=99, Evalue=5e-21, Organism=Escherichia coli, GI1788968, Length=293, Percent_Identity=56.6552901023891, Blast_Score=347, Evalue=7e-97, Organism=Saccharomyces cerevisiae, GI6320794, Length=242, Percent_Identity=28.9256198347107, Blast_Score=122, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6322509, Length=240, Percent_Identity=30.4166666666667, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6325068, Length=214, Percent_Identity=31.7757009345794, Blast_Score=110, Evalue=3e-25, Organism=Drosophila melanogaster, GI28573828, Length=253, Percent_Identity=32.4110671936759, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI28573830, Length=253, Percent_Identity=32.4110671936759, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI28573826, Length=253, Percent_Identity=32.4110671936759, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI28573832, Length=253, Percent_Identity=32.4110671936759, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI161077047, Length=253, Percent_Identity=32.4110671936759, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI20129957, Length=276, Percent_Identity=27.1739130434783, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24653422, Length=278, Percent_Identity=26.978417266187, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI281363323, Length=278, Percent_Identity=26.978417266187, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24653424, Length=278, Percent_Identity=26.978417266187, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI281363321, Length=278, Percent_Identity=26.978417266187, Blast_Score=92, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 33773; Mature: 33642
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGINFDVSRPKARSSINMTTKFHTIGLIGKPHHPGTNQTLKRLHHWLTVQGYEVLVEERV CCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHEEECCHHHHHHHHH ASELGTNIIAVDLLEIGARCDLAIVVGGDGNMLGAARVLARFDVGVIGVNRGNLGFLTDL HHHHCCCEEEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCEEEEECC PPDAFEEALAKVLDGEFDTEHRFLLEAEVYRHGMLKASNTAVNEAVLHPGKIAHMIEFEV CHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCEECCCCHHHHHHCCCCCEEEEEEEEE YIDNQFMYSQRADGMIVSTPTGSTAYALSAGGAILTPNLQALILVPMFPHTLSCRPIVVD EECCEEEECCCCCCEEEECCCCCEEEEEECCCEEECCCCEEEEEEECCCCCCCCCEEEEE ACSTIKMVVSPENGENLEVSCDGHVHLAVLPGDEIIVRRSSEQLRLIHPKGHNYFHVLRS CCCEEEEEECCCCCCEEEEEECCEEEEEEECCCEEEEEECCCCEEEECCCCCCHHHHHHH KLGWGSKLF HCCCCCCCC >Mature Secondary Structure GINFDVSRPKARSSINMTTKFHTIGLIGKPHHPGTNQTLKRLHHWLTVQGYEVLVEERV CCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHEEECCHHHHHHHHH ASELGTNIIAVDLLEIGARCDLAIVVGGDGNMLGAARVLARFDVGVIGVNRGNLGFLTDL HHHHCCCEEEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCEEEEECC PPDAFEEALAKVLDGEFDTEHRFLLEAEVYRHGMLKASNTAVNEAVLHPGKIAHMIEFEV CHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCEECCCCHHHHHHCCCCCEEEEEEEEE YIDNQFMYSQRADGMIVSTPTGSTAYALSAGGAILTPNLQALILVPMFPHTLSCRPIVVD EECCEEEECCCCCCEEEECCCCCEEEEEECCCEEECCCCEEEEEEECCCCCCCCCEEEEE ACSTIKMVVSPENGENLEVSCDGHVHLAVLPGDEIIVRRSSEQLRLIHPKGHNYFHVLRS CCCEEEEEECCCCCCEEEEEECCEEEEEEECCCEEEEEECCCCEEEECCCCCCHHHHHHH KLGWGSKLF HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA