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The map label for this gene is yuxL [H]

Identifier: 117921330

GI number: 117921330

Start: 3457088

End: 3459904

Strand: Reverse

Name: yuxL [H]

Synonym: Shewana3_2889

Alternate gene names: 117921330

Gene position: 3459904-3457088 (Counterclockwise)

Preceding gene: 117921332

Following gene: 117921323

Centisome position: 69.58

GC content: 49.13

Gene sequence:

>2817_bases
TTGAAGTTATTACCTATCACATCGCTAGTGCTTTTATCCCTCGGAATACTGCCCAATGCTCATGCAGAAACCAGCACTAA
ACCGCTTACCCTGACCGACATTATGCATTTTGAGTCCCTCGAGAAGCCCGTTATCGCTGACAATGGTCAAGTGCTGGCGG
TCGAGGTGGCACCGGATCGTGGCGATAGCCATGGCTTAATCAAAAATCTGCAAACAGGAAAAGACTTTCAGATTGAAGGC
GGCTCGGACCCTATCGTGAGTCACACTGGCCGTTATGTGGCGATGGCCGTTAAGCCTAGTTTGCTTAAAGTTGAAACCAG
CGATGCTAAAGCCAAGAAAAAGCTTAAGGCCGATATGGTGCTGCTCGATACCCAAACCGGCACGCAAACCAAATTTGAAC
GGGTAAAGGAATTTGCCTTTAGTGACGATGGCGCACATTTAGCCATTTGGTTTGAAGCCGATGAAGAGGCCAAGAAAGAC
GCCAAGGAGAAGACCGAAGGTGCCGATGATAAGCCCAAAGCCGAGAAGGTGAAGGTCGATAAGTTCGACCAAGGCCGTCG
TTTGAGTTTAGTGAATTTGTCTTCGCCATCGCAGCGGGTGGATCTGGAGCATGTGACCGCCTATCAGTTTGATAAAGACA
GTCGCCGCTTGGCTGTCGCGGTCAATGATATCGAGGCGAAACAACATCAACTGCAACTGATTGATTTGAAAGACTACAAA
AAATCAACGGCATTTGAATCTCAAACCCAACAAATTGGTGCGGTTTCACTGTCGAAAAATGGTCGCTGGCTGGCCTTTAC
CCAAGGGGATGCGAGTGAATTACCCTATGGCCGCAGCTATCAGTTAAGCCTAGTCGATATCGCTTCGGGCAAAATTCGCC
CAGTGCCAAACACCAAAGAGTGGACGTTAAATCGTTACGCCAGTTTAAACTTCTCGCTAGACAGTGAACGACTCTTCTTT
GGCCGTGTGCCCGAGGTGAGCCAGCAGCTCAGTTTGAAGAAAATTGCAGAAGAAAAAGACCTTTACGACAAAGAGATAGT
CACAGGTCTACGTGGGCTTAAGGTCTGGCATGGGGACGATCCGCGGATTAAACCCCATGAAATCAAGCAATATGATAAAG
AGCAAAAGCGCACTTACTTAGCCGTGCTGCATTTAGGTTCAAACAATGTGGTGCAGCTTGGCGATAAAACGGTGCCAGAT
GTGACTCTGTCGCAGCACAAGCGTTATATGCTGGCAAGCTCAGACTTACCCTATCGTAAGATGATCACTTGGGCGGGTTT
TTATCAAGACTATTACTTGGTGGATATCAACACCGGTCGCAAGTTGCCGCTGTTAACCCAACAACCAAGTGATGCTGAGC
CGAGCTTATCGGGCGACGGCAAATATGTAGCCTATTATCAGCAAGGTAATGTGTATTTATACGATATTGCCGAAGGTCGT
CGCACCAATCTGACCAAGTCTTTAAAGGTAAGTTTTGCCGATGAAGACCATGATTATCCCTCCAATGCGCCGGGTTATGG
TTTTGGCCCTTGGCTGAAGGACGATGCAGGTTTCCTCGTCTACGACAAATACGATGTGTGGCAGTTTAATACCGCATCGA
AAAGTGGATTTGCCTTAACCGCAGGGCAGGGGCGCGCTCAAAAAATTCAATATCGTGTTGAAGGCTTAGTCGATAATCCC
GATGAGCCAACCACGCTGGCCTACAATGCCACTGTGCTGCTGCATGGTTACAGCGACAAGACTAAGGCCGATGGTTTTTA
TCAAGCGACCTTAGGCGAAGCGGGCGTTAAGACCTTGATGGAAGGCGAGTATAAGCTAGCAGTGCTTGGGCGCAGTAAAG
ATGCGGATACCTTGGTGTTCTCTAAGGAGCGCTTCGATCTGTTCCCTGACTTGTATACCGCAAGCTATCAGGCTCCACAA
AATGCGGTGAAGCAAACCGATTTAGACAAGCAGCGCCGAGCCTTTAATTGGAGCCAAGCCGAGTTAGTGCATTGGACCAA
TGGCGATGGCAAGCCGCTCGATGGCGTATTGATTAAGCCTACTAACTATCAAGTGGGCGAGCGTTATCCTGTGCTGGTTT
ACTACTATCGCTTTATGACCGACAGGCTGCATGCCTTCCCGCAAATGAAGGTCAACCACAGACCAAACTTCGCTTGGTAT
GTGAATAACGGCTATGCGGTATTCTTGCCGGATATTCGTTTCGATATCGGTTACCCCGGCGCCAGTTCGGTTCAAGCGCT
GACCTCGGGCGTGCAAAAGCTTATCGAGATGGGCGTTGCCGATGCTAACGCTATTGGTTTACAAGGACACTCTTGGAGCG
GTTACCAAACGGCGTTTGCCATCACTCAAACCAAGATGTTTAAAGCCGCAGTGGCTGGTGCGCCAGTGGCCAACATGACC
AGCGCTTACAGCGGGATCCGCCATGGCACAGGGCTTGCGCGCCAATTCCAATACGAAACCGGCCAAAGCCGCATAGGTGA
AAGCCTCTTCGCTGCACCGCAAAAGTATATTGAGAACTCGCCAGTCTTCTATGCCGATCGCATTCAAACGCCATTGATGA
TCATGTTTGGCGATAAAGACGATGCGGTGCCTTGGGAGCAGGGTGTTGAAATGTACTTGGCGATGCGCCGTGCGGGTAAA
GATGTGGTGTTTTTACAATATGAAGATGAACCCCATCATCTGAAGAAATACCCCAATAAGCTCGATTACAGCATTCGCAT
GATGGAATACTTCGACCATTATCTTAAAGGTAAGCCCGCGCCAGCCTGGTTAAGCCAAGGCGAAGCCTATGTCGAATATA
AAGCCGATGATGAGTAA

Upstream 100 bases:

>100_bases
TCGGGTATAACTTGTAAAAATACTGGGTTATAACGATGATGGAGGACCAATGGTTAAAAAAGTCTACTTTAGTCTAACAA
CTACATAAAAGAGGAAGACA

Downstream 100 bases:

>100_bases
TCATCTGTTTTAGGTTTATTCATAAGCAAACGCCACCATAAGGTGGCGTTTTTTTATGGAAATAAAGGACCAAAGCGAGT
GATTTTTTACTTTAATAAGT

Product: peptidase S9 prolyl oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 938; Mature: 938

Protein sequence:

>938_residues
MKLLPITSLVLLSLGILPNAHAETSTKPLTLTDIMHFESLEKPVIADNGQVLAVEVAPDRGDSHGLIKNLQTGKDFQIEG
GSDPIVSHTGRYVAMAVKPSLLKVETSDAKAKKKLKADMVLLDTQTGTQTKFERVKEFAFSDDGAHLAIWFEADEEAKKD
AKEKTEGADDKPKAEKVKVDKFDQGRRLSLVNLSSPSQRVDLEHVTAYQFDKDSRRLAVAVNDIEAKQHQLQLIDLKDYK
KSTAFESQTQQIGAVSLSKNGRWLAFTQGDASELPYGRSYQLSLVDIASGKIRPVPNTKEWTLNRYASLNFSLDSERLFF
GRVPEVSQQLSLKKIAEEKDLYDKEIVTGLRGLKVWHGDDPRIKPHEIKQYDKEQKRTYLAVLHLGSNNVVQLGDKTVPD
VTLSQHKRYMLASSDLPYRKMITWAGFYQDYYLVDINTGRKLPLLTQQPSDAEPSLSGDGKYVAYYQQGNVYLYDIAEGR
RTNLTKSLKVSFADEDHDYPSNAPGYGFGPWLKDDAGFLVYDKYDVWQFNTASKSGFALTAGQGRAQKIQYRVEGLVDNP
DEPTTLAYNATVLLHGYSDKTKADGFYQATLGEAGVKTLMEGEYKLAVLGRSKDADTLVFSKERFDLFPDLYTASYQAPQ
NAVKQTDLDKQRRAFNWSQAELVHWTNGDGKPLDGVLIKPTNYQVGERYPVLVYYYRFMTDRLHAFPQMKVNHRPNFAWY
VNNGYAVFLPDIRFDIGYPGASSVQALTSGVQKLIEMGVADANAIGLQGHSWSGYQTAFAITQTKMFKAAVAGAPVANMT
SAYSGIRHGTGLARQFQYETGQSRIGESLFAAPQKYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLAMRRAGK
DVVFLQYEDEPHHLKKYPNKLDYSIRMMEYFDHYLKGKPAPAWLSQGEAYVEYKADDE

Sequences:

>Translated_938_residues
MKLLPITSLVLLSLGILPNAHAETSTKPLTLTDIMHFESLEKPVIADNGQVLAVEVAPDRGDSHGLIKNLQTGKDFQIEG
GSDPIVSHTGRYVAMAVKPSLLKVETSDAKAKKKLKADMVLLDTQTGTQTKFERVKEFAFSDDGAHLAIWFEADEEAKKD
AKEKTEGADDKPKAEKVKVDKFDQGRRLSLVNLSSPSQRVDLEHVTAYQFDKDSRRLAVAVNDIEAKQHQLQLIDLKDYK
KSTAFESQTQQIGAVSLSKNGRWLAFTQGDASELPYGRSYQLSLVDIASGKIRPVPNTKEWTLNRYASLNFSLDSERLFF
GRVPEVSQQLSLKKIAEEKDLYDKEIVTGLRGLKVWHGDDPRIKPHEIKQYDKEQKRTYLAVLHLGSNNVVQLGDKTVPD
VTLSQHKRYMLASSDLPYRKMITWAGFYQDYYLVDINTGRKLPLLTQQPSDAEPSLSGDGKYVAYYQQGNVYLYDIAEGR
RTNLTKSLKVSFADEDHDYPSNAPGYGFGPWLKDDAGFLVYDKYDVWQFNTASKSGFALTAGQGRAQKIQYRVEGLVDNP
DEPTTLAYNATVLLHGYSDKTKADGFYQATLGEAGVKTLMEGEYKLAVLGRSKDADTLVFSKERFDLFPDLYTASYQAPQ
NAVKQTDLDKQRRAFNWSQAELVHWTNGDGKPLDGVLIKPTNYQVGERYPVLVYYYRFMTDRLHAFPQMKVNHRPNFAWY
VNNGYAVFLPDIRFDIGYPGASSVQALTSGVQKLIEMGVADANAIGLQGHSWSGYQTAFAITQTKMFKAAVAGAPVANMT
SAYSGIRHGTGLARQFQYETGQSRIGESLFAAPQKYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLAMRRAGK
DVVFLQYEDEPHHLKKYPNKLDYSIRMMEYFDHYLKGKPAPAWLSQGEAYVEYKADDE
>Mature_938_residues
MKLLPITSLVLLSLGILPNAHAETSTKPLTLTDIMHFESLEKPVIADNGQVLAVEVAPDRGDSHGLIKNLQTGKDFQIEG
GSDPIVSHTGRYVAMAVKPSLLKVETSDAKAKKKLKADMVLLDTQTGTQTKFERVKEFAFSDDGAHLAIWFEADEEAKKD
AKEKTEGADDKPKAEKVKVDKFDQGRRLSLVNLSSPSQRVDLEHVTAYQFDKDSRRLAVAVNDIEAKQHQLQLIDLKDYK
KSTAFESQTQQIGAVSLSKNGRWLAFTQGDASELPYGRSYQLSLVDIASGKIRPVPNTKEWTLNRYASLNFSLDSERLFF
GRVPEVSQQLSLKKIAEEKDLYDKEIVTGLRGLKVWHGDDPRIKPHEIKQYDKEQKRTYLAVLHLGSNNVVQLGDKTVPD
VTLSQHKRYMLASSDLPYRKMITWAGFYQDYYLVDINTGRKLPLLTQQPSDAEPSLSGDGKYVAYYQQGNVYLYDIAEGR
RTNLTKSLKVSFADEDHDYPSNAPGYGFGPWLKDDAGFLVYDKYDVWQFNTASKSGFALTAGQGRAQKIQYRVEGLVDNP
DEPTTLAYNATVLLHGYSDKTKADGFYQATLGEAGVKTLMEGEYKLAVLGRSKDADTLVFSKERFDLFPDLYTASYQAPQ
NAVKQTDLDKQRRAFNWSQAELVHWTNGDGKPLDGVLIKPTNYQVGERYPVLVYYYRFMTDRLHAFPQMKVNHRPNFAWY
VNNGYAVFLPDIRFDIGYPGASSVQALTSGVQKLIEMGVADANAIGLQGHSWSGYQTAFAITQTKMFKAAVAGAPVANMT
SAYSGIRHGTGLARQFQYETGQSRIGESLFAAPQKYIENSPVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLAMRRAGK
DVVFLQYEDEPHHLKKYPNKLDYSIRMMEYFDHYLKGKPAPAWLSQGEAYVEYKADDE

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25144537, Length=239, Percent_Identity=24.2677824267782, Blast_Score=67, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 105549; Mature: 105549

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLPITSLVLLSLGILPNAHAETSTKPLTLTDIMHFESLEKPVIADNGQVLAVEVAPDR
CCCCCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEECCCCEEEEEECCCC
GDSHGLIKNLQTGKDFQIEGGSDPIVSHTGRYVAMAVKPSLLKVETSDAKAKKKLKADMV
CCCCHHHHHCCCCCCEEEECCCCCCEECCCCEEEEEECCCEEEEECCCHHHHHHHCCCEE
LLDTQTGTQTKFERVKEFAFSDDGAHLAIWFEADEEAKKDAKEKTEGADDKPKAEKVKVD
EEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEECC
KFDQGRRLSLVNLSSPSQRVDLEHVTAYQFDKDSRRLAVAVNDIEAKQHQLQLIDLKDYK
CCCCCCEEEEEECCCCCHHCCHHHEEEEEECCCCCEEEEEEECCCCCCEEEEEEEHHHCC
KSTAFESQTQQIGAVSLSKNGRWLAFTQGDASELPYGRSYQLSLVDIASGKIRPVPNTKE
HHHHHHHHHHHCEEEEECCCCCEEEEECCCHHHCCCCCCEEEEEEEECCCCEEECCCCCC
WTLNRYASLNFSLDSERLFFGRVPEVSQQLSLKKIAEEKDLYDKEIVTGLRGLKVWHGDD
EEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCC
PRIKPHEIKQYDKEQKRTYLAVLHLGSNNVVQLGDKTVPDVTLSQHKRYMLASSDLPYRK
CCCCHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCCHHHCCEEEEECCCCCHHH
MITWAGFYQDYYLVDINTGRKLPLLTQQPSDAEPSLSGDGKYVAYYQQGNVYLYDIAEGR
HHHHEEECCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCC
RTNLTKSLKVSFADEDHDYPSNAPGYGFGPWLKDDAGFLVYDKYDVWQFNTASKSGFALT
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCEEEE
AGQGRAQKIQYRVEGLVDNPDEPTTLAYNATVLLHGYSDKTKADGFYQATLGEAGVKTLM
CCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHH
EGEYKLAVLGRSKDADTLVFSKERFDLFPDLYTASYQAPQNAVKQTDLDKQRRAFNWSQA
CCCEEEEEEECCCCCCEEEEECCHHCCCCCHHHCCCCCCHHHHHHCCCHHHHHHCCCCCE
ELVHWTNGDGKPLDGVLIKPTNYQVGERYPVLVYYYRFMTDRLHAFPQMKVNHRPNFAWY
EEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEECCCCCEEEE
VNNGYAVFLPDIRFDIGYPGASSVQALTSGVQKLIEMGVADANAIGLQGHSWSGYQTAFA
EECCEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEE
ITQTKMFKAAVAGAPVANMTSAYSGIRHGTGLARQFQYETGQSRIGESLFAAPQKYIENS
EHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHCCHHHHCCC
PVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLAMRRAGKDVVFLQYEDEPHHLKKYPNK
CEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCC
LDYSIRMMEYFDHYLKGKPAPAWLSQGEAYVEYKADDE
CCCEEHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCC
>Mature Secondary Structure
MKLLPITSLVLLSLGILPNAHAETSTKPLTLTDIMHFESLEKPVIADNGQVLAVEVAPDR
CCCCCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEECCCCEEEEEECCCC
GDSHGLIKNLQTGKDFQIEGGSDPIVSHTGRYVAMAVKPSLLKVETSDAKAKKKLKADMV
CCCCHHHHHCCCCCCEEEECCCCCCEECCCCEEEEEECCCEEEEECCCHHHHHHHCCCEE
LLDTQTGTQTKFERVKEFAFSDDGAHLAIWFEADEEAKKDAKEKTEGADDKPKAEKVKVD
EEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEECC
KFDQGRRLSLVNLSSPSQRVDLEHVTAYQFDKDSRRLAVAVNDIEAKQHQLQLIDLKDYK
CCCCCCEEEEEECCCCCHHCCHHHEEEEEECCCCCEEEEEEECCCCCCEEEEEEEHHHCC
KSTAFESQTQQIGAVSLSKNGRWLAFTQGDASELPYGRSYQLSLVDIASGKIRPVPNTKE
HHHHHHHHHHHCEEEEECCCCCEEEEECCCHHHCCCCCCEEEEEEEECCCCEEECCCCCC
WTLNRYASLNFSLDSERLFFGRVPEVSQQLSLKKIAEEKDLYDKEIVTGLRGLKVWHGDD
EEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCC
PRIKPHEIKQYDKEQKRTYLAVLHLGSNNVVQLGDKTVPDVTLSQHKRYMLASSDLPYRK
CCCCHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCCCCCHHHCCEEEEECCCCCHHH
MITWAGFYQDYYLVDINTGRKLPLLTQQPSDAEPSLSGDGKYVAYYQQGNVYLYDIAEGR
HHHHEEECCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCC
RTNLTKSLKVSFADEDHDYPSNAPGYGFGPWLKDDAGFLVYDKYDVWQFNTASKSGFALT
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCEEEE
AGQGRAQKIQYRVEGLVDNPDEPTTLAYNATVLLHGYSDKTKADGFYQATLGEAGVKTLM
CCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEECCCHHHHHHHH
EGEYKLAVLGRSKDADTLVFSKERFDLFPDLYTASYQAPQNAVKQTDLDKQRRAFNWSQA
CCCEEEEEEECCCCCCEEEEECCHHCCCCCHHHCCCCCCHHHHHHCCCHHHHHHCCCCCE
ELVHWTNGDGKPLDGVLIKPTNYQVGERYPVLVYYYRFMTDRLHAFPQMKVNHRPNFAWY
EEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEECCCCCEEEE
VNNGYAVFLPDIRFDIGYPGASSVQALTSGVQKLIEMGVADANAIGLQGHSWSGYQTAFA
EECCEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEE
ITQTKMFKAAVAGAPVANMTSAYSGIRHGTGLARQFQYETGQSRIGESLFAAPQKYIENS
EHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHCCHHHHCCC
PVFYADRIQTPLMIMFGDKDDAVPWEQGVEMYLAMRRAGKDVVFLQYEDEPHHLKKYPNK
CEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCC
LDYSIRMMEYFDHYLKGKPAPAWLSQGEAYVEYKADDE
CCCEEHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]