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The map label for this gene is 117921321

Identifier: 117921321

GI number: 117921321

Start: 3444500

End: 3445444

Strand: Reverse

Name: 117921321

Synonym: Shewana3_2880

Alternate gene names: NA

Gene position: 3445444-3444500 (Counterclockwise)

Preceding gene: 117921323

Following gene: 117921320

Centisome position: 69.29

GC content: 43.92

Gene sequence:

>945_bases
ATGATGAACGTTTTTTGTAAAACTCTACTTGCTTCTGCGCTAGCTTCTGCAACTCTGGCTTCTGCTTATGCCGCTGAGCC
ACTGACTGTTTATGGTAAGTTGAATGTTACCGCTCAATCAAATGATGAGAAAGGTGATTCTACAACAACTATTCAAAGTA
ATGCTTCTCGTTTTGGTGTGAAGGGTGATTTCGAACTGTCTAGCTCGCTGGAAGCGTTCTACACAGTAGAGTACGAAGTT
GATACTGGCGCTGCAACAAGCGACAACTTCAAAGCCCGTAACCAATTCGTTGGTTTAAAAGGTGCATTTGGTTCTTTCTC
TGTTGGTCGTAACGACACTCTGTTAAAGATCTCTCAAGGTAACGTTGACCAGTTCAACGATTTATCTGGTGACTTAAAGA
GCCTGTTCAAAGGTGAAAACCGTTTAGGCCAAACGGCAACTTACCTGTCACCTTCAATCGGTGGTTTCGTATTCGGTGCA
ACTTATGCTGCTGAAGGCGATGCTGACCAACAAGCTCAAGACGGTTTCAGCTTAGCCGCTATGTACGGTGACGCTAAACT
GAAAAAATCACCTTTCTACGCCGCTATCGCTTACGATTCTGACGTAAAAGGTTACGAAATCCTGCGTGCATCGGTACAAG
GTAAAATCGCTGATTTAACCTTAGGTGGTATGTACCAACAACAGGAACAAACCTACAAAAACTCTTTACCTGTTAACACT
GACAGCGTGAACGGTTACCTGTTAAGCGCCGCTTACGATATCAACGCAGTGACCTTAAAAGCTCAATACCAAGACATGGA
AGACTTAGGCGATTCATGGTCAGTGGGTGCGGACTACAGCTTAGGTAAGCCAACGAAAGTGTTTGCTTTCTATACTAACC
GCTCTATGGAAGCGTCTAACGACGATGACAAATACATCGGTGTTGGTTTAGAACACAAGTTCTAA

Upstream 100 bases:

>100_bases
CCAAGTTGTCACAATTGAAATAAAACTGAAACAGATTCATTGCAAACTTTCGGTCGTTCCAAACCAATAACCAAGACGAA
CATAACGTCGAAAGGATTAA

Downstream 100 bases:

>100_bases
TTTCAGCATTAAGGTTGAATTAAGGAGGCTTAGGCCTCCTTTTTTATTGCGATAAACAAACAGTTATATAAACTTAATAT
GACAATTATCGCGACAATAT

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Gram-Negative Porin Superfamily; Outer Membrane Porin Protein; Porin Protein; Porin Signal Peptide Protein

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDSTTTIQSNASRFGVKGDFELSSSLEAFYTVEYEV
DTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQGNVDQFNDLSGDLKSLFKGENRLGQTATYLSPSIGGFVFGA
TYAAEGDADQQAQDGFSLAAMYGDAKLKKSPFYAAIAYDSDVKGYEILRASVQGKIADLTLGGMYQQQEQTYKNSLPVNT
DSVNGYLLSAAYDINAVTLKAQYQDMEDLGDSWSVGADYSLGKPTKVFAFYTNRSMEASNDDDKYIGVGLEHKF

Sequences:

>Translated_314_residues
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDSTTTIQSNASRFGVKGDFELSSSLEAFYTVEYEV
DTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQGNVDQFNDLSGDLKSLFKGENRLGQTATYLSPSIGGFVFGA
TYAAEGDADQQAQDGFSLAAMYGDAKLKKSPFYAAIAYDSDVKGYEILRASVQGKIADLTLGGMYQQQEQTYKNSLPVNT
DSVNGYLLSAAYDINAVTLKAQYQDMEDLGDSWSVGADYSLGKPTKVFAFYTNRSMEASNDDDKYIGVGLEHKF
>Mature_314_residues
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDSTTTIQSNASRFGVKGDFELSSSLEAFYTVEYEV
DTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQGNVDQFNDLSGDLKSLFKGENRLGQTATYLSPSIGGFVFGA
TYAAEGDADQQAQDGFSLAAMYGDAKLKKSPFYAAIAYDSDVKGYEILRASVQGKIADLTLGGMYQQQEQTYKNSLPVNT
DSVNGYLLSAAYDINAVTLKAQYQDMEDLGDSWSVGADYSLGKPTKVFAFYTNRSMEASNDDDKYIGVGLEHKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33795; Mature: 33795

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDSTTTIQSNASRFGV
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCC
KGDFELSSSLEAFYTVEYEVDTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQG
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCEEEEECC
NVDQFNDLSGDLKSLFKGENRLGQTATYLSPSIGGFVFGATYAAEGDADQQAQDGFSLAA
CCCCHHHCCHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCHHHHCCCEEEE
MYGDAKLKKSPFYAAIAYDSDVKGYEILRASVQGKIADLTLGGMYQQQEQTYKNSLPVNT
EECCCEECCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCC
DSVNGYLLSAAYDINAVTLKAQYQDMEDLGDSWSVGADYSLGKPTKVFAFYTNRSMEASN
CCCCCEEEEEEECCEEEEEEEECCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
DDDKYIGVGLEHKF
CCCCEEEEECCCCC
>Mature Secondary Structure
MMNVFCKTLLASALASATLASAYAAEPLTVYGKLNVTAQSNDEKGDSTTTIQSNASRFGV
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCC
KGDFELSSSLEAFYTVEYEVDTGAATSDNFKARNQFVGLKGAFGSFSVGRNDTLLKISQG
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCEEEEECC
NVDQFNDLSGDLKSLFKGENRLGQTATYLSPSIGGFVFGATYAAEGDADQQAQDGFSLAA
CCCCHHHCCHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCHHHHCCCEEEE
MYGDAKLKKSPFYAAIAYDSDVKGYEILRASVQGKIADLTLGGMYQQQEQTYKNSLPVNT
EECCCEECCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCC
DSVNGYLLSAAYDINAVTLKAQYQDMEDLGDSWSVGADYSLGKPTKVFAFYTNRSMEASN
CCCCCEEEEEEECCEEEEEEEECCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
DDDKYIGVGLEHKF
CCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA