| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is phnA [C]
Identifier: 117921302
GI number: 117921302
Start: 3420357
End: 3420920
Strand: Reverse
Name: phnA [C]
Synonym: Shewana3_2861
Alternate gene names: 117921302
Gene position: 3420920-3420357 (Counterclockwise)
Preceding gene: 117921303
Following gene: 117921300
Centisome position: 68.8
GC content: 51.6
Gene sequence:
>564_bases ATGACTGAAAATGAATTGCTAACTCGCTGTGGCGGCAAATGTGAACTCTGCGCAAGTGACGTCGAACTCTCTATTTATGA CTTACCGGCTTCCGATGGTCATGAAAACGAGATCATGATTTGTGAAAATTGCAGCAGCCAAATCGCCGCGCCGGATACCA TGGACATGAACCACTGGCGTTGTCTGAACGACAGCATGTGGAGCCAAGTCCCAGCGGTTCAAGTGATGTCATATCGCATG CTGAAACGCCTAAGCAGCGAAAGCTGGGCGCAGGATTTACTGGATATGCTGTATCTGGAAGAGGATTTGCGCGCTTGGGG CGATGCCGAGGCGGCTGCCGCGAGCGATGATACGCCTCCGACCTTAGACAGCAACGGTGCGGTACTGAACGCTGGCGATA CCGTGGTTATCATTAAAGATCTCAACGTCAAAGGCACCAGCTTTGTCGCAAAACGCGGCACAGCGGTTCGCAATATCTCG TTGACCAACAATCCAGAGCATATCGAAGGCCGTGTGAATGGCACTCGCATCGTGATCCTGACCTGCTTTGTGAAGAAGTC TTAA
Upstream 100 bases:
>100_bases ATAACTCATATAAAAAATAGGGTTATCTTGCCTTCCCCCCTGCCGTGAAAAGCCAATTTATGGCATAATCCGCGTTTTAT TACGCATGTAGACAGAAAAA
Downstream 100 bases:
>100_bases TCGACTCGCGTTTAAGCTGTTAGCTTGATACCTGAACCGCCCAATTTTTACAAATTGGGCGGTTTTTTATGTGCTTAAAT CCTAGGCTATCACTTGTCGA
Product: PhnA protein
Products: NA
Alternate protein names: Alkylphosphonate Uptake Protein; PhnA Protein-Like Protein; PhnA-Like Protein; Zn-Ribbon-Containing Protein; Alkylphosphonate Utilization Operon Protein Phna; Protein PhnA; Protein Involved In Phosphonate Metabolism; Phosphonate Metabolism Zn-Ribbon-Containing Protein; Phosphonoacetate Hydrolase; Phosphonoacetate Hydrolase PhnA; Phna Protein
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTENELLTRCGGKCELCASDVELSIYDLPASDGHENEIMICENCSSQIAAPDTMDMNHWRCLNDSMWSQVPAVQVMSYRM LKRLSSESWAQDLLDMLYLEEDLRAWGDAEAAAASDDTPPTLDSNGAVLNAGDTVVIIKDLNVKGTSFVAKRGTAVRNIS LTNNPEHIEGRVNGTRIVILTCFVKKS
Sequences:
>Translated_187_residues MTENELLTRCGGKCELCASDVELSIYDLPASDGHENEIMICENCSSQIAAPDTMDMNHWRCLNDSMWSQVPAVQVMSYRM LKRLSSESWAQDLLDMLYLEEDLRAWGDAEAAAASDDTPPTLDSNGAVLNAGDTVVIIKDLNVKGTSFVAKRGTAVRNIS LTNNPEHIEGRVNGTRIVILTCFVKKS >Mature_186_residues TENELLTRCGGKCELCASDVELSIYDLPASDGHENEIMICENCSSQIAAPDTMDMNHWRCLNDSMWSQVPAVQVMSYRML KRLSSESWAQDLLDMLYLEEDLRAWGDAEAAAASDDTPPTLDSNGAVLNAGDTVVIIKDLNVKGTSFVAKRGTAVRNISL TNNPEHIEGRVNGTRIVILTCFVKKS
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=83, Percent_Identity=44.578313253012, Blast_Score=60, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20572; Mature: 20441
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENELLTRCGGKCELCASDVELSIYDLPASDGHENEIMICENCSSQIAAPDTMDMNHWR CCCCHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEE CLNDSMWSQVPAVQVMSYRMLKRLSSESWAQDLLDMLYLEEDLRAWGDAEAAAASDDTPP ECCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TLDSNGAVLNAGDTVVIIKDLNVKGTSFVAKRGTAVRNISLTNNPEHIEGRVNGTRIVIL CCCCCCCEEECCCEEEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEECCEEEEEE TCFVKKS EEEEECC >Mature Secondary Structure TENELLTRCGGKCELCASDVELSIYDLPASDGHENEIMICENCSSQIAAPDTMDMNHWR CCCHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEE CLNDSMWSQVPAVQVMSYRMLKRLSSESWAQDLLDMLYLEEDLRAWGDAEAAAASDDTPP ECCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TLDSNGAVLNAGDTVVIIKDLNVKGTSFVAKRGTAVRNISLTNNPEHIEGRVNGTRIVIL CCCCCCCEEECCCEEEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEECCEEEEEE TCFVKKS EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA