| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921299
Identifier: 117921299
GI number: 117921299
Start: 3417292
End: 3418305
Strand: Reverse
Name: 117921299
Synonym: Shewana3_2858
Alternate gene names: NA
Gene position: 3418305-3417292 (Counterclockwise)
Preceding gene: 117921300
Following gene: 117921298
Centisome position: 68.75
GC content: 50.69
Gene sequence:
>1014_bases ATGGTAAAAAAACGCGAAGCGTTTGAAATTGAAGGCAAGCGAGTCGTTGCGGGCACGCAAATGGGGATAAAACTACCCGC CGCTAAGCTCTATACCGATACCCAACTCGATATTCACGTGGAAGTGTTCCATGGCCTCAAACCTGGCCCGACACTGTTAG TCTGCGCCGCCATCCATGGCGATGAGCTCAATGGTATTGAGATCTGCCGGCGCTTGCTTGGGCGCGTCAATCCTAAAAAT CTAGCAGGCACTTTGATAGTGGTGCCCATAGTCAATGTGTTTGGTTTTATTCAACAATCTCGTTATCTCCCCGATAGGCG TGATCTCAATCGTTGTTTCCCCGGCTCGAGTAAAGGTGCACTGGCGAGTCGTTTAGCCAACCTTTTTGCGACCCAATTAC TGGTGCATGCGACCCATGTGATTGATTTACATACGGGCGCAATCCATAGGGATAACTTGCCGCAGATCCGTTGTGATACT GGCGATGAAACCATGTTAGCCATGGCGAATGCCTTCGGCGCGCCACTTATCATGCACTCCAAGGCGCGCATCGTGTCGAT GCGTGGCTATGCGAACCAGCAGGGCATTCCCTGTATTTTGTATGAGGCGGGCGAGGCGCTGCGCTTTAGTGAACTGGCGA TTAAGTCGGGTCTTAAGGGGGTACTCAATGTGATGCGAAGCCTTGGTATGCTCAAGGGGCGAGTCAGTAACAAGGTCGCT AGTGTCAGTGCAATACGCAGTTATTGGGTTCGCAGTGAGTCCGATGGTTTAGTGAATATGAAGCTTAAACTCGGGCAGCG GGTCAACAAGGGGTATATCATCGCCCATATTGTGAGTCCGCATGGGGGCGATAGTGTGGCCATTCGCGCGCCCACCGATG GCATTATCATAGGGATCAGCAATATACCTGTGACCAACGAAGGTGAGGGCATGTTCCATATTGCGCAGTTTGAAGGGGAT GAAATTGAAATTGCCAACGAACAACTCGATGAATTTTTAATGGAATACGCCTGA
Upstream 100 bases:
>100_bases AAGACTTGGCTTGCTCACTTTGAACGGTAATCGGCCCAGTTTTTGGGGCGAGAGACTAAGTGCCATTTGGCGTTTTTAGG GATAACATCAGGGAGTGACT
Downstream 100 bases:
>100_bases TATTTACTGTGCCTTAGCTTTACTGCCAATAGCGTAGCGTAATGAGGAGTCAAATGAAGACTGTTAACGTCGGTGATAAA CAGATTTGCCCGAGTAAGAT
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Deacylase; Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinate Dehydrogenase Subunit Sdh; Succinate Dehydrogenase Subunit; Deacylase-Like; Succinylglutamate Desuccinylase; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHGDELNGIEICRRLLGRVNPKN LAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGALASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDT GDETMLAMANAFGAPLIMHSKARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGISNIPVTNEGEGMFHIAQFEGD EIEIANEQLDEFLMEYA
Sequences:
>Translated_337_residues MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHGDELNGIEICRRLLGRVNPKN LAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGALASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDT GDETMLAMANAFGAPLIMHSKARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGISNIPVTNEGEGMFHIAQFEGD EIEIANEQLDEFLMEYA >Mature_337_residues MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHGDELNGIEICRRLLGRVNPKN LAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGALASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDT GDETMLAMANAFGAPLIMHSKARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGISNIPVTNEGEGMFHIAQFEGD EIEIANEQLDEFLMEYA
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36785; Mature: 36785
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHG CCCCCCCEEECCCEEEEECCCCEECCHHHEEECCEEEEEEEEECCCCCCCCEEEEEEECC DELNGIEICRRLLGRVNPKNLAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGA CCCCHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCH LASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDTGDETMLAMANAFGAPLIMHS HHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCEEEECCCCCHHHHHHHHCCCCEEEEC KARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA CCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGIS HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEC NIPVTNEGEGMFHIAQFEGDEIEIANEQLDEFLMEYA CCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHCC >Mature Secondary Structure MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHG CCCCCCCEEECCCEEEEECCCCEECCHHHEEECCEEEEEEEEECCCCCCCCEEEEEEECC DELNGIEICRRLLGRVNPKNLAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGA CCCCHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCH LASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDTGDETMLAMANAFGAPLIMHS HHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCEEEECCCCCHHHHHHHHCCCCEEEEC KARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA CCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGIS HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEC NIPVTNEGEGMFHIAQFEGDEIEIANEQLDEFLMEYA CCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA