Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117921299

Identifier: 117921299

GI number: 117921299

Start: 3417292

End: 3418305

Strand: Reverse

Name: 117921299

Synonym: Shewana3_2858

Alternate gene names: NA

Gene position: 3418305-3417292 (Counterclockwise)

Preceding gene: 117921300

Following gene: 117921298

Centisome position: 68.75

GC content: 50.69

Gene sequence:

>1014_bases
ATGGTAAAAAAACGCGAAGCGTTTGAAATTGAAGGCAAGCGAGTCGTTGCGGGCACGCAAATGGGGATAAAACTACCCGC
CGCTAAGCTCTATACCGATACCCAACTCGATATTCACGTGGAAGTGTTCCATGGCCTCAAACCTGGCCCGACACTGTTAG
TCTGCGCCGCCATCCATGGCGATGAGCTCAATGGTATTGAGATCTGCCGGCGCTTGCTTGGGCGCGTCAATCCTAAAAAT
CTAGCAGGCACTTTGATAGTGGTGCCCATAGTCAATGTGTTTGGTTTTATTCAACAATCTCGTTATCTCCCCGATAGGCG
TGATCTCAATCGTTGTTTCCCCGGCTCGAGTAAAGGTGCACTGGCGAGTCGTTTAGCCAACCTTTTTGCGACCCAATTAC
TGGTGCATGCGACCCATGTGATTGATTTACATACGGGCGCAATCCATAGGGATAACTTGCCGCAGATCCGTTGTGATACT
GGCGATGAAACCATGTTAGCCATGGCGAATGCCTTCGGCGCGCCACTTATCATGCACTCCAAGGCGCGCATCGTGTCGAT
GCGTGGCTATGCGAACCAGCAGGGCATTCCCTGTATTTTGTATGAGGCGGGCGAGGCGCTGCGCTTTAGTGAACTGGCGA
TTAAGTCGGGTCTTAAGGGGGTACTCAATGTGATGCGAAGCCTTGGTATGCTCAAGGGGCGAGTCAGTAACAAGGTCGCT
AGTGTCAGTGCAATACGCAGTTATTGGGTTCGCAGTGAGTCCGATGGTTTAGTGAATATGAAGCTTAAACTCGGGCAGCG
GGTCAACAAGGGGTATATCATCGCCCATATTGTGAGTCCGCATGGGGGCGATAGTGTGGCCATTCGCGCGCCCACCGATG
GCATTATCATAGGGATCAGCAATATACCTGTGACCAACGAAGGTGAGGGCATGTTCCATATTGCGCAGTTTGAAGGGGAT
GAAATTGAAATTGCCAACGAACAACTCGATGAATTTTTAATGGAATACGCCTGA

Upstream 100 bases:

>100_bases
AAGACTTGGCTTGCTCACTTTGAACGGTAATCGGCCCAGTTTTTGGGGCGAGAGACTAAGTGCCATTTGGCGTTTTTAGG
GATAACATCAGGGAGTGACT

Downstream 100 bases:

>100_bases
TATTTACTGTGCCTTAGCTTTACTGCCAATAGCGTAGCGTAATGAGGAGTCAAATGAAGACTGTTAACGTCGGTGATAAA
CAGATTTGCCCGAGTAAGAT

Product: succinylglutamate desuccinylase/aspartoacylase

Products: NA

Alternate protein names: Deacylase; Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinate Dehydrogenase Subunit Sdh; Succinate Dehydrogenase Subunit; Deacylase-Like; Succinylglutamate Desuccinylase; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHGDELNGIEICRRLLGRVNPKN
LAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGALASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDT
GDETMLAMANAFGAPLIMHSKARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA
SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGISNIPVTNEGEGMFHIAQFEGD
EIEIANEQLDEFLMEYA

Sequences:

>Translated_337_residues
MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHGDELNGIEICRRLLGRVNPKN
LAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGALASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDT
GDETMLAMANAFGAPLIMHSKARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA
SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGISNIPVTNEGEGMFHIAQFEGD
EIEIANEQLDEFLMEYA
>Mature_337_residues
MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHGDELNGIEICRRLLGRVNPKN
LAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGALASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDT
GDETMLAMANAFGAPLIMHSKARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA
SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGISNIPVTNEGEGMFHIAQFEGD
EIEIANEQLDEFLMEYA

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36785; Mature: 36785

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHG
CCCCCCCEEECCCEEEEECCCCEECCHHHEEECCEEEEEEEEECCCCCCCCEEEEEEECC
DELNGIEICRRLLGRVNPKNLAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGA
CCCCHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCH
LASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDTGDETMLAMANAFGAPLIMHS
HHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCEEEECCCCCHHHHHHHHCCCCEEEEC
KARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA
CCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGIS
HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEC
NIPVTNEGEGMFHIAQFEGDEIEIANEQLDEFLMEYA
CCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MVKKREAFEIEGKRVVAGTQMGIKLPAAKLYTDTQLDIHVEVFHGLKPGPTLLVCAAIHG
CCCCCCCEEECCCEEEEECCCCEECCHHHEEECCEEEEEEEEECCCCCCCCEEEEEEECC
DELNGIEICRRLLGRVNPKNLAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGA
CCCCHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCH
LASRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDTGDETMLAMANAFGAPLIMHS
HHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCEEEECCCCCHHHHHHHHCCCCEEEEC
KARIVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKVA
CCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
SVSAIRSYWVRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGIS
HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEC
NIPVTNEGEGMFHIAQFEGDEIEIANEQLDEFLMEYA
CCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA