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The map label for this gene is ybaY [C]

Identifier: 117921214

GI number: 117921214

Start: 3312890

End: 3313324

Strand: Reverse

Name: ybaY [C]

Synonym: Shewana3_2773

Alternate gene names: 117921214

Gene position: 3313324-3312890 (Counterclockwise)

Preceding gene: 117921216

Following gene: 117921213

Centisome position: 66.64

GC content: 49.89

Gene sequence:

>435_bases
ATGAGACAAGGGTTAAGGATTAGCGGACAGACATCTGCATGGCAAAAATTAGCGGCTATGGTGTTACTCGCCGTCACCAC
GGTGATTTCAGGTTGTGCCACACCTAATGCGATTGTCGAGATTAAAGGTGAGGCCATGTACCGCGAGCGTATCGCATTGC
CCGCCGATGCCAAGTTGATAGTGCAGTTGCTTGATGTCTCTAAGATGGATGTGCCCGCCGTGGTCATGGCAGAGCGCGTT
TCCCAAGGGGCGAAAACCCCAACGCCGTTTAGTTTTTCGATGGGGCGTGATCAGTTTGAAGCGGGGCATACCTATGCCAT
TGGGGCAAGGATAATGCTCGGTGATAAGTTATTGTTTATTAATACTCAAGCCTATCATGTCGACCTCAATTCGACTGAGC
CTATGACGATACTGCTTGAGAAAGTCGGTCGCTAA

Upstream 100 bases:

>100_bases
AATGGTGGCTTATCATAGGAAGATATGCCCAGCATGACAAGATTTATAGCTTGGGCGTATAGACATCCAGAAGTCTTTAT
GTATGATTAGGAGAAATGAA

Downstream 100 bases:

>100_bases
TTTGTTTGCTCTTTGATGAGTGGCATACGCGCGCCGGAACCTTTGATTGTTGAATAGAAGAGGCGCGGTATGCCAGTTAA
AATTCCAGATCATCTGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein-Like Protein

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MRQGLRISGQTSAWQKLAAMVLLAVTTVISGCATPNAIVEIKGEAMYRERIALPADAKLIVQLLDVSKMDVPAVVMAERV
SQGAKTPTPFSFSMGRDQFEAGHTYAIGARIMLGDKLLFINTQAYHVDLNSTEPMTILLEKVGR

Sequences:

>Translated_144_residues
MRQGLRISGQTSAWQKLAAMVLLAVTTVISGCATPNAIVEIKGEAMYRERIALPADAKLIVQLLDVSKMDVPAVVMAERV
SQGAKTPTPFSFSMGRDQFEAGHTYAIGARIMLGDKLLFINTQAYHVDLNSTEPMTILLEKVGR
>Mature_144_residues
MRQGLRISGQTSAWQKLAAMVLLAVTTVISGCATPNAIVEIKGEAMYRERIALPADAKLIVQLLDVSKMDVPAVVMAERV
SQGAKTPTPFSFSMGRDQFEAGHTYAIGARIMLGDKLLFINTQAYHVDLNSTEPMTILLEKVGR

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15665; Mature: 15665

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQGLRISGQTSAWQKLAAMVLLAVTTVISGCATPNAIVEIKGEAMYRERIALPADAKLI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCHHHH
VQLLDVSKMDVPAVVMAERVSQGAKTPTPFSFSMGRDQFEAGHTYAIGARIMLGDKLLFI
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEEEEEEECCEEEEE
NTQAYHVDLNSTEPMTILLEKVGR
ECEEEEEECCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRQGLRISGQTSAWQKLAAMVLLAVTTVISGCATPNAIVEIKGEAMYRERIALPADAKLI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCHHHH
VQLLDVSKMDVPAVVMAERVSQGAKTPTPFSFSMGRDQFEAGHTYAIGARIMLGDKLLFI
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEEEEEEECCEEEEE
NTQAYHVDLNSTEPMTILLEKVGR
ECEEEEEECCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA