| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921184
Identifier: 117921184
GI number: 117921184
Start: 3273983
End: 3274531
Strand: Direct
Name: 117921184
Synonym: Shewana3_2743
Alternate gene names: NA
Gene position: 3273983-3274531 (Clockwise)
Preceding gene: 117921183
Following gene: 117921186
Centisome position: 65.85
GC content: 46.81
Gene sequence:
>549_bases ATGAATGAGATAGATCTGATCATTGAACAAACCGATAACTGGGTGAAAAAAGTGATCATGAAATACAACATTTGCCCCTT CGCCAGACGTGAGGTTGAGCGCGGCAGTATTCGCTATCTCGTTGTTGAACAAACCAAAGTCAAGCTAGTGCTTAAAGCCT TAATTGAAGAATGCCAATATCTAGATGCCCACCCAGAGCACGAAACCACGCTGTTTATTCTGCCGCGGGGTTTTGAGGGC TTTTACACTTACCTCGATCTGGTCGATATGGCGAACGACGCCTTATTCGACAACGACTATGAAGGCGTGTATCAGCTCGC GCATTTTCATCCCGACTATTGCTTCGAGGATGAACCACAGGATTCTGCGGCCAATTATACCAACCGCGCGCCCTACCCAA CCCTGCATATTATCCGCGAGGCCAGTATGGAGTTAGCCCTAGCTAACTACAACGACCCCGAATCAATTCCCGAGCGCAAT ATTCAATTTTGTGAGCGTAAAGGCAGCGAGTTTTTTATTAAATTACTCGCAGAGTGCATGGGGAAATAG
Upstream 100 bases:
>100_bases CCAGCAGAAGATCTTTAATATCACTATGGCCATCTTGCTTGTGGCGTCTATCATCCCTATGATCGCCCCCTAATTTTGGC CGTAAGAGTTAAGCACTAGC
Downstream 100 bases:
>100_bases CTTTTATTTCAAAGTAATAAACCCAACAAAGCCTAAGCTTAGGCATTGGGAAAGGTCGCACTGTTTACACCAATCACAGG ATTTGTGTGCTCCATTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNEIDLIIEQTDNWVKKVIMKYNICPFARREVERGSIRYLVVEQTKVKLVLKALIEECQYLDAHPEHETTLFILPRGFEG FYTYLDLVDMANDALFDNDYEGVYQLAHFHPDYCFEDEPQDSAANYTNRAPYPTLHIIREASMELALANYNDPESIPERN IQFCERKGSEFFIKLLAECMGK
Sequences:
>Translated_182_residues MNEIDLIIEQTDNWVKKVIMKYNICPFARREVERGSIRYLVVEQTKVKLVLKALIEECQYLDAHPEHETTLFILPRGFEG FYTYLDLVDMANDALFDNDYEGVYQLAHFHPDYCFEDEPQDSAANYTNRAPYPTLHIIREASMELALANYNDPESIPERN IQFCERKGSEFFIKLLAECMGK >Mature_182_residues MNEIDLIIEQTDNWVKKVIMKYNICPFARREVERGSIRYLVVEQTKVKLVLKALIEECQYLDAHPEHETTLFILPRGFEG FYTYLDLVDMANDALFDNDYEGVYQLAHFHPDYCFEDEPQDSAANYTNRAPYPTLHIIREASMELALANYNDPESIPERN IQFCERKGSEFFIKLLAECMGK
Specific function: Unknown
COG id: COG3310
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21331; Mature: 21331
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIDLIIEQTDNWVKKVIMKYNICPFARREVERGSIRYLVVEQTKVKLVLKALIEECQY CCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH LDAHPEHETTLFILPRGFEGFYTYLDLVDMANDALFDNDYEGVYQLAHFHPDYCFEDEPQ CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC DSAANYTNRAPYPTLHIIREASMELALANYNDPESIPERNIQFCERKGSEFFIKLLAECM CCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH GK CC >Mature Secondary Structure MNEIDLIIEQTDNWVKKVIMKYNICPFARREVERGSIRYLVVEQTKVKLVLKALIEECQY CCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH LDAHPEHETTLFILPRGFEGFYTYLDLVDMANDALFDNDYEGVYQLAHFHPDYCFEDEPQ CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC DSAANYTNRAPYPTLHIIREASMELALANYNDPESIPERNIQFCERKGSEFFIKLLAECM CCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH GK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA