| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117921161
Identifier: 117921161
GI number: 117921161
Start: 3251958
End: 3252563
Strand: Reverse
Name: 117921161
Synonym: Shewana3_2720
Alternate gene names: NA
Gene position: 3252563-3251958 (Counterclockwise)
Preceding gene: 117921163
Following gene: 117921160
Centisome position: 65.41
GC content: 47.36
Gene sequence:
>606_bases ATGAAGAAAACCTTAGCCCGTGGCTTAATGAACCTGCTGCCGATGGCTTTAAGCCTGTGGTTGTTTTGGTCATTGTTTGT ATCGTTAGATGGTTTAGGGATTTTTATTTTAGAGTTGGTAGGGATTAACCAACATTTTGTCGGCGCGGGCTTTATCTTAG TCGTGGCCATAGTGTTTGCCGTGGGCCTGTTGTTTTCGGTGAGTCCTATTGTGTGGCTCTATGGCTGGATTGAGCGTCAG CTGATGCGTTTCCCGCTGTTTAAATCTGTTTATGGCAGTATTCGTGATATCGCTTCCTTAATGAACCGTGAGGGCAAACC CAATACTCAGCAAACCGTGTTGGTTAAACAGGCTAATGGCGGGTTTGTGGTGGGCTTTATTATGACGGATACGCCGCCGC AGCCGTTGCTCGATGCCTTACCCGAAGGGGATTGGGTGCCTGTGTTATTCCAACTCAGTTACCAAATGGCGGGGGTGACG AGTCTCGTCAAACGTGAAGATTTGATTTTAGTGGATTGGTCTTTTGAAGAAGCGATGCGCTTTAATTTAACGGCGGGGAT CTCACAAACGCCGGGCGCGGCAACAGTAAAAACTAAAGCTGAATAA
Upstream 100 bases:
>100_bases AAGTGCTGGTGCAAAAGTGACTCTGTGGTAGCATTTAACGCGCTTTTTAGCGTAAATAATTTATGCCTTTTTTTATCCCA TTGGATTTGATGAGATTGTA
Downstream 100 bases:
>100_bases GTGAGTTTTGATTTTTGCGTCAGTTTTTTGCGTCAAATAGAGACGTTTTTGTGATACAATCCGATGGCGGCTTAATAGGT CGCCATTTTTTATGCTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKKTLARGLMNLLPMALSLWLFWSLFVSLDGLGIFILELVGINQHFVGAGFILVVAIVFAVGLLFSVSPIVWLYGWIERQ LMRFPLFKSVYGSIRDIASLMNREGKPNTQQTVLVKQANGGFVVGFIMTDTPPQPLLDALPEGDWVPVLFQLSYQMAGVT SLVKREDLILVDWSFEEAMRFNLTAGISQTPGAATVKTKAE
Sequences:
>Translated_201_residues MKKTLARGLMNLLPMALSLWLFWSLFVSLDGLGIFILELVGINQHFVGAGFILVVAIVFAVGLLFSVSPIVWLYGWIERQ LMRFPLFKSVYGSIRDIASLMNREGKPNTQQTVLVKQANGGFVVGFIMTDTPPQPLLDALPEGDWVPVLFQLSYQMAGVT SLVKREDLILVDWSFEEAMRFNLTAGISQTPGAATVKTKAE >Mature_201_residues MKKTLARGLMNLLPMALSLWLFWSLFVSLDGLGIFILELVGINQHFVGAGFILVVAIVFAVGLLFSVSPIVWLYGWIERQ LMRFPLFKSVYGSIRDIASLMNREGKPNTQQTVLVKQANGGFVVGFIMTDTPPQPLLDALPEGDWVPVLFQLSYQMAGVT SLVKREDLILVDWSFEEAMRFNLTAGISQTPGAATVKTKAE
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22282; Mature: 22282
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLARGLMNLLPMALSLWLFWSLFVSLDGLGIFILELVGINQHFVGAGFILVVAIVFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VGLLFSVSPIVWLYGWIERQLMRFPLFKSVYGSIRDIASLMNREGKPNTQQTVLVKQANG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC GFVVGFIMTDTPPQPLLDALPEGDWVPVLFQLSYQMAGVTSLVKREDLILVDWSFEEAMR CEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHH FNLTAGISQTPGAATVKTKAE HHHCCCCCCCCCCCCEEECCC >Mature Secondary Structure MKKTLARGLMNLLPMALSLWLFWSLFVSLDGLGIFILELVGINQHFVGAGFILVVAIVFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VGLLFSVSPIVWLYGWIERQLMRFPLFKSVYGSIRDIASLMNREGKPNTQQTVLVKQANG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC GFVVGFIMTDTPPQPLLDALPEGDWVPVLFQLSYQMAGVTSLVKREDLILVDWSFEEAMR CEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHH FNLTAGISQTPGAATVKTKAE HHHCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA