| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is feoB [H]
Identifier: 117921111
GI number: 117921111
Start: 3187357
End: 3189651
Strand: Reverse
Name: feoB [H]
Synonym: Shewana3_2670
Alternate gene names: 117921111
Gene position: 3189651-3187357 (Counterclockwise)
Preceding gene: 117921112
Following gene: 117921110
Centisome position: 64.15
GC content: 49.06
Gene sequence:
>2295_bases ATGACTAAGCAGTTTCATTGCGTCACTGTTGGTAACCCAAACGCGGGAAAATCAACACTCTTTAACGCGCTAACGGGCGC GAATCAACAAGTAGGCAACTGGTCCGGTGTGACCGTTGAGAAAAAAACCGGTCATTTTACCCTTAATGGCGCCGACGTTT ATTTAACCGACTTACCCGGCATTTACGATTTACTCCCTGCGGGTAACAGTTGTGATTGTTCCCTCGATGAGCAGATTGCT CAGCAGTACCTCGCCGAACAACGTGTCGATGGCATCATCAACTTAGTCGATGCGACCAATATTGAGCGTCACCTCTATTT GACGGCACAGCTTCGCGAGCTGTCTATTCCTATGGTGGTGGTATTGAATAAAATCGATGCGGCCATCAAGCGTGGGATCC GTGTCGATTTAAAGAAAATGAGCCAAGAGTTAGGTTGTCCTGTGATTGGCGTGTGTTCTCGCGACCCTGCCGATGTGGCC AAAGTGCAAGCGCAGGTATTGGACTTACTCCAAGGCCGCGTATCAGAAGCACCTTTAATACTCGATTACGACGAACAAAT TGAAGCGGGTGTGCAACTCCTTTGCAGTAAAGATCCCAACTTAAGCCGTGGCCGCGCCTTGGCGATGTTAGGTAATGGTT CTGGTTGTGGCAGTTGTAAAAACGCTGAACTGCAGGATGAAGTGAATACTTGCACCCAGCAAATTGCGCAGCAAGGGCAT GACATCGAAGTACTGGTCGCCACGACACGTTTTAACTTTGTCGAGCGTGTATTCCAGGGTTCAGTGAAAGCGGATGGCTT CCTAACCTTAAGTGACAAACTCGATAAATTAGTTTTACATCCCGTACTTGGCATTCCGGTGTTTTTATTTGTCATGTATC TGATGTTTATGTTCAGCATCAACATTGGCAGTGCGTTTATCGATTTCTTCGATGTGTTTGTCGGGGCATTGCTGGTAGAC CATTTTGGTGCATTGCTTGGCAATATCGGCGCGCCGGCCTGGCTTGTGACGATTCTTGCGGGTGGTGTCGGTCAAGGTAT TCAAACCGTTTCAACCTTTATTCCGGTTATCGCAGCGCTATTCCTCGGTTTATCTATTCTTGAAAGTTCAGGCTATATGG CCCGCGCGGCCTTCGTGGTGGATGGCTTAATGCGCCGTATTGGCCTACCGGGTAAAGCCTTCGTACCTATGATTGTGGGC TTTGGTTGTTCGGTGCCAGCCATTATGGCGACCCGTACCTTAGGCAGTGAGCGTGAGCGTATCGTGACAGGTATGATGGC TCCTTTTATGTCCTGCGGTGCGCGTTTACCTGTGTATGCGCTATTTGCGGCGGCCTTCTTCCCTGATTCTGGTCAAAACC TAGTGTTTTTACTGTATGTGATTGGGATTTTTGCGGCGATTGGTACTGGATTATTACTGCGTAGCACCTTATTACCCGGT ACTAGCAGTGCGGTGGTGATGGAGCTGCCAAGCTATGAACTGCCAAAATTTAAAGCCGTGATGGTGCGTACCGGTAAGCG GACTAAGAGCTTTATCTTAGGTGCGGGTAAAACCATCGTACTTGTGGTAACCCTGCTGAACTTTATCAATGCGATTGGGG TTGATGGCACTTTTGGCCATGAAGATAGCCAAGCGTCACTCTTAAGTGTGGCGAGCCAAAAGGTGACTCCTATCTTTGCT CCAATGGGGATTGAGCAAGATAACTGGCCTGCGACTGTGGGTATTATCACGGGTATTTTCGCTAAAGAAGCGGTAGTCGG TACACTCAACAGCTTATATACCAATGCTGCTCATGACGATGGCGAATTAACACCATTGGCTGACAGTTTCAGCGAAGCAT TGGCGACGATTCCTGCTAACTTATTCGGTTTGGATTTAGAAGATCCACTTAAGTTATCTGTGGGTGATGTCTCGAGTACC GATGTTGCCGCAGAGGCGCAAGGTGTCGCAACATCAACCTTTAGTGCCTTGCAGTCAGGCTTCACCACTACGGTCGCGGC GTTTGCTTATCTGCTGTTTATCTTACTCTATACTCCTTGTGTCGCCGCGATGGGCGCCTTAGTGAATGAGTTTGGTACTC GCTGGGCAACCTTTGCTGCCACTTGGACATTCTCACTGGCCTACGGCAGTGCAACCATTGCTTACCAAGCGGCGACCTTT GGCGCACATCCACTGCAATCGAGTCTGTGGATTGGTTTCTTCCTCGTGGCGCTTGTGGTGTTCTATCTGTGGCTCAAACG TAAGGGCCGTAGAACCCAACAGATCATTCCAGGCGTTAGGATCATTACCGAGTAA
Upstream 100 bases:
>100_bases CGCAGAGCGCCAATGGGCTCTGGTTTAGAGTTGGATATTCGTGGCAGTAAGCTTTGTATGCGCAGAGATCTGGCAGACAT CATAGAGGTGGAAAAGGCGA
Downstream 100 bases:
>100_bases CCGCTGAGTAATAAATGTCAGCTTAGTAATGACAAAGATAAAAGCAGCTTTCATGGCTGCTTTTATTGTTTTACTATCCA TGCCATAAACCATAGTTTTT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MTKQFHCVTVGNPNAGKSTLFNALTGANQQVGNWSGVTVEKKTGHFTLNGADVYLTDLPGIYDLLPAGNSCDCSLDEQIA QQYLAEQRVDGIINLVDATNIERHLYLTAQLRELSIPMVVVLNKIDAAIKRGIRVDLKKMSQELGCPVIGVCSRDPADVA KVQAQVLDLLQGRVSEAPLILDYDEQIEAGVQLLCSKDPNLSRGRALAMLGNGSGCGSCKNAELQDEVNTCTQQIAQQGH DIEVLVATTRFNFVERVFQGSVKADGFLTLSDKLDKLVLHPVLGIPVFLFVMYLMFMFSINIGSAFIDFFDVFVGALLVD HFGALLGNIGAPAWLVTILAGGVGQGIQTVSTFIPVIAALFLGLSILESSGYMARAAFVVDGLMRRIGLPGKAFVPMIVG FGCSVPAIMATRTLGSERERIVTGMMAPFMSCGARLPVYALFAAAFFPDSGQNLVFLLYVIGIFAAIGTGLLLRSTLLPG TSSAVVMELPSYELPKFKAVMVRTGKRTKSFILGAGKTIVLVVTLLNFINAIGVDGTFGHEDSQASLLSVASQKVTPIFA PMGIEQDNWPATVGIITGIFAKEAVVGTLNSLYTNAAHDDGELTPLADSFSEALATIPANLFGLDLEDPLKLSVGDVSST DVAAEAQGVATSTFSALQSGFTTTVAAFAYLLFILLYTPCVAAMGALVNEFGTRWATFAATWTFSLAYGSATIAYQAATF GAHPLQSSLWIGFFLVALVVFYLWLKRKGRRTQQIIPGVRIITE
Sequences:
>Translated_764_residues MTKQFHCVTVGNPNAGKSTLFNALTGANQQVGNWSGVTVEKKTGHFTLNGADVYLTDLPGIYDLLPAGNSCDCSLDEQIA QQYLAEQRVDGIINLVDATNIERHLYLTAQLRELSIPMVVVLNKIDAAIKRGIRVDLKKMSQELGCPVIGVCSRDPADVA KVQAQVLDLLQGRVSEAPLILDYDEQIEAGVQLLCSKDPNLSRGRALAMLGNGSGCGSCKNAELQDEVNTCTQQIAQQGH DIEVLVATTRFNFVERVFQGSVKADGFLTLSDKLDKLVLHPVLGIPVFLFVMYLMFMFSINIGSAFIDFFDVFVGALLVD HFGALLGNIGAPAWLVTILAGGVGQGIQTVSTFIPVIAALFLGLSILESSGYMARAAFVVDGLMRRIGLPGKAFVPMIVG FGCSVPAIMATRTLGSERERIVTGMMAPFMSCGARLPVYALFAAAFFPDSGQNLVFLLYVIGIFAAIGTGLLLRSTLLPG TSSAVVMELPSYELPKFKAVMVRTGKRTKSFILGAGKTIVLVVTLLNFINAIGVDGTFGHEDSQASLLSVASQKVTPIFA PMGIEQDNWPATVGIITGIFAKEAVVGTLNSLYTNAAHDDGELTPLADSFSEALATIPANLFGLDLEDPLKLSVGDVSST DVAAEAQGVATSTFSALQSGFTTTVAAFAYLLFILLYTPCVAAMGALVNEFGTRWATFAATWTFSLAYGSATIAYQAATF GAHPLQSSLWIGFFLVALVVFYLWLKRKGRRTQQIIPGVRIITE >Mature_763_residues TKQFHCVTVGNPNAGKSTLFNALTGANQQVGNWSGVTVEKKTGHFTLNGADVYLTDLPGIYDLLPAGNSCDCSLDEQIAQ QYLAEQRVDGIINLVDATNIERHLYLTAQLRELSIPMVVVLNKIDAAIKRGIRVDLKKMSQELGCPVIGVCSRDPADVAK VQAQVLDLLQGRVSEAPLILDYDEQIEAGVQLLCSKDPNLSRGRALAMLGNGSGCGSCKNAELQDEVNTCTQQIAQQGHD IEVLVATTRFNFVERVFQGSVKADGFLTLSDKLDKLVLHPVLGIPVFLFVMYLMFMFSINIGSAFIDFFDVFVGALLVDH FGALLGNIGAPAWLVTILAGGVGQGIQTVSTFIPVIAALFLGLSILESSGYMARAAFVVDGLMRRIGLPGKAFVPMIVGF GCSVPAIMATRTLGSERERIVTGMMAPFMSCGARLPVYALFAAAFFPDSGQNLVFLLYVIGIFAAIGTGLLLRSTLLPGT SSAVVMELPSYELPKFKAVMVRTGKRTKSFILGAGKTIVLVVTLLNFINAIGVDGTFGHEDSQASLLSVASQKVTPIFAP MGIEQDNWPATVGIITGIFAKEAVVGTLNSLYTNAAHDDGELTPLADSFSEALATIPANLFGLDLEDPLKLSVGDVSSTD VAAEAQGVATSTFSALQSGFTTTVAAFAYLLFILLYTPCVAAMGALVNEFGTRWATFAATWTFSLAYGSATIAYQAATFG AHPLQSSLWIGFFLVALVVFYLWLKRKGRRTQQIIPGVRIITE
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=751, Percent_Identity=41.0119840213049, Blast_Score=498, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 81665; Mature: 81534
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQFHCVTVGNPNAGKSTLFNALTGANQQVGNWSGVTVEKKTGHFTLNGADVYLTDLPG CCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECCCEEEEECCCC IYDLLPAGNSCDCSLDEQIAQQYLAEQRVDGIINLVDATNIERHLYLTAQLRELSIPMVV HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCHHH VLNKIDAAIKRGIRVDLKKMSQELGCPVIGVCSRDPADVAKVQAQVLDLLQGRVSEAPLI HHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEE LDYDEQIEAGVQLLCSKDPNLSRGRALAMLGNGSGCGSCKNAELQDEVNTCTQQIAQQGH ECCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC DIEVLVATTRFNFVERVFQGSVKADGFLTLSDKLDKLVLHPVLGIPVFLFVMYLMFMFSI CEEEEEEEHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIGSAFIDFFDVFVGALLVDHFGALLGNIGAPAWLVTILAGGVGQGIQTVSTFIPVIAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FLGLSILESSGYMARAAFVVDGLMRRIGLPGKAFVPMIVGFGCSVPAIMATRTLGSERER HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHH IVTGMMAPFMSCGARLPVYALFAAAFFPDSGQNLVFLLYVIGIFAAIGTGLLLRSTLLPG HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TSSAVVMELPSYELPKFKAVMVRTGKRTKSFILGAGKTIVLVVTLLNFINAIGVDGTFGH CCCEEEEECCCCCCCCHHEEEEECCCCCHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCC EDSQASLLSVASQKVTPIFAPMGIEQDNWPATVGIITGIFAKEAVVGTLNSLYTNAAHDD CCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GELTPLADSFSEALATIPANLFGLDLEDPLKLSVGDVSSTDVAAEAQGVATSTFSALQSG CCCCCHHHHHHHHHHHCCHHHCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCC FTTTVAAFAYLLFILLYTPCVAAMGALVNEFGTRWATFAATWTFSLAYGSATIAYQAATF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCEEEEEEHHHC GAHPLQSSLWIGFFLVALVVFYLWLKRKGRRTQQIIPGVRIITE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEECC >Mature Secondary Structure TKQFHCVTVGNPNAGKSTLFNALTGANQQVGNWSGVTVEKKTGHFTLNGADVYLTDLPG CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECCCEEEEECCCC IYDLLPAGNSCDCSLDEQIAQQYLAEQRVDGIINLVDATNIERHLYLTAQLRELSIPMVV HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCHHH VLNKIDAAIKRGIRVDLKKMSQELGCPVIGVCSRDPADVAKVQAQVLDLLQGRVSEAPLI HHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEE LDYDEQIEAGVQLLCSKDPNLSRGRALAMLGNGSGCGSCKNAELQDEVNTCTQQIAQQGH ECCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC DIEVLVATTRFNFVERVFQGSVKADGFLTLSDKLDKLVLHPVLGIPVFLFVMYLMFMFSI CEEEEEEEHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIGSAFIDFFDVFVGALLVDHFGALLGNIGAPAWLVTILAGGVGQGIQTVSTFIPVIAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FLGLSILESSGYMARAAFVVDGLMRRIGLPGKAFVPMIVGFGCSVPAIMATRTLGSERER HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHH IVTGMMAPFMSCGARLPVYALFAAAFFPDSGQNLVFLLYVIGIFAAIGTGLLLRSTLLPG HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TSSAVVMELPSYELPKFKAVMVRTGKRTKSFILGAGKTIVLVVTLLNFINAIGVDGTFGH CCCEEEEECCCCCCCCHHEEEEECCCCCHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCC EDSQASLLSVASQKVTPIFAPMGIEQDNWPATVGIITGIFAKEAVVGTLNSLYTNAAHDD CCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GELTPLADSFSEALATIPANLFGLDLEDPLKLSVGDVSSTDVAAEAQGVATSTFSALQSG CCCCCHHHHHHHHHHHCCHHHCCCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCC FTTTVAAFAYLLFILLYTPCVAAMGALVNEFGTRWATFAATWTFSLAYGSATIAYQAATF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCEEEEEEHHHC GAHPLQSSLWIGFFLVALVVFYLWLKRKGRRTQQIIPGVRIITE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA