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The map label for this gene is cysS [H]

Identifier: 117921105

GI number: 117921105

Start: 3180798

End: 3182183

Strand: Reverse

Name: cysS [H]

Synonym: Shewana3_2664

Alternate gene names: 117921105

Gene position: 3182183-3180798 (Counterclockwise)

Preceding gene: 117921108

Following gene: 117921103

Centisome position: 64.0

GC content: 48.63

Gene sequence:

>1386_bases
ATGCCGATGTTGAAGATTTACAACAGTATTACCCGTCAAAAACAGGAATTTAAGCCAATTACTCCCGGAAAAGTTGGGAT
GTATGTATGCGGGGTGACCGTATACGATCTGTGTCATATTGGCCATGGGCGTACTTTTGTTTCCTTCGATATGATCGTTC
GCTACCTGCGTTATGCGGGTTATGAAGTGAATTTTCAACGTAACATTACCGATATTGATGACAAAATCATCAAACGCGCC
AACGAAAATCAAGAAGATTGCAATACATTAACCGATCGCTTGATTGGTGAAATGCACAAGGATTTCGATGCGCTGAATAT
GATCCGTCCCGATTTCGAGCCACGTGCCACTCTGCACATTGCCGAAATCATCGATATGGTTGAGCGTTTACTGGCCCGTG
GTCATGCCTATGTGGCTGCCGATGGCGATGTGCTGTTCAGTGTGGCCTCTTTCCCTGAATACGGCCGCCTATCAGGCCAG
AACCTGGAGCAATTACAGGCGGGTGCACGGGTTGAGGTTGACGATAACAAGCAAAATCCAATGGATTTCGTGCTGTGGAA
AATGTCTAAACCGGGCGAGCCAACATGGGAATCACCATGGGGGCCGGGTCGTCCAGGCTGGCATATCGAATGTTCGGCAA
TGAACAGCAAGCACTTAGGTCTGCATTTCGATATTCACGGTGGCGGTTCAGATTTACAATTCCCGCACCATGAGAACGAA
ATTGCTCAGTCTTGCTGCGCCCATGATACGCCATACGTGAATTACTGGATGCACACTGGCATGGTGATGGTTGACCGTGA
GAAGATGTCAAAGTCTTTAGGTAACTTCTTCACCATTCGTGATGTATTAGGCCATTACGACGCTGAAACCGTGCGTTACT
TCCTGCTATCGGGTCACTATCGTAGCCAAATCAACTACTCAGAAGAAAACCTCAAGCAGGCACGTGCCGCCTTAGAGCGT
TTATACACTGCGATTAAAGATGTTGACCTGACTGTTACAGCAGCACCTGCGGAAGAGTTTGTCGCTAAGTTTAAAGCGGC
CATGGACGATGACTTTAATACGCCAGAAGCTTACTCAGTGCTGTTTGATATGGTACGTGAGATCAACCGCTTGAAAACCA
CCGATATGGCGCAGGCGTCAGCTATGGCTGTTGCCATGAAGCAACTGGCCGATGTGTTGGGATTATTGCACCAAGCGCCC
GATGCCTTCTTTAAAGGTGAGGGGAGCGATGATGAAGTGGCAGAGATTGAAGCGCTGATCGTTGAGCGTAATCGTGCCCG
CGCCGAGAAAGATTGGCCTGCGGCTGATGTTGCGCGTAATCGGTTAAATGAGCTTGGCGTAGTCTTAGAAGATGGTCCAA
GCGGTACCACTTGGCGCAAGAAATAG

Upstream 100 bases:

>100_bases
TAACTTATCTCGGATTGCACGCAAAGTGCAGTATTCAAAACCCTCGCCAGCGTGGTAGACTGACCCCTTGATTTTACACT
CGAATCTATCATTGAAGAGA

Downstream 100 bases:

>100_bases
GTTGTCGTAAGAAATAATCCCATCGCCTAAGTTAGATTCGCATCGATAATAAAAAACCTGCCAATGGCAGGTTTTTTTAT
TGGTCTCACGCTTTTAATTG

Product: cysteinyl-tRNA synthetase

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS [H]

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MPMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEVNFQRNITDIDDKIIKRA
NENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQ
NLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENE
IAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQINYSEENLKQARAALER
LYTAIKDVDLTVTAAPAEEFVAKFKAAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAP
DAFFKGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLEDGPSGTTWRKK

Sequences:

>Translated_461_residues
MPMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEVNFQRNITDIDDKIIKRA
NENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQ
NLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENE
IAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQINYSEENLKQARAALER
LYTAIKDVDLTVTAAPAEEFVAKFKAAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAP
DAFFKGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLEDGPSGTTWRKK
>Mature_460_residues
PMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEVNFQRNITDIDDKIIKRAN
ENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQN
LEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEI
AQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQINYSEENLKQARAALERL
YTAIKDVDLTVTAAPAEEFVAKFKAAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPD
AFFKGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLEDGPSGTTWRKK

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI13375695, Length=453, Percent_Identity=35.9823399558499, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI10835051, Length=250, Percent_Identity=40, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI21269877, Length=250, Percent_Identity=40, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI303304987, Length=250, Percent_Identity=40, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI62240992, Length=250, Percent_Identity=40, Blast_Score=193, Evalue=3e-49,
Organism=Escherichia coli, GI1786737, Length=461, Percent_Identity=73.3188720173536, Blast_Score=700, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17509795, Length=237, Percent_Identity=40.084388185654, Blast_Score=178, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17509797, Length=237, Percent_Identity=40.084388185654, Blast_Score=178, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6324082, Length=309, Percent_Identity=34.9514563106796, Blast_Score=192, Evalue=9e-50,
Organism=Drosophila melanogaster, GI19922218, Length=499, Percent_Identity=35.6713426853707, Blast_Score=261, Evalue=9e-70,
Organism=Drosophila melanogaster, GI19922364, Length=280, Percent_Identity=36.4285714285714, Blast_Score=179, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e [H]

EC number: =6.1.1.16 [H]

Molecular weight: Translated: 52269; Mature: 52138

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAG
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
YEVNFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHI
CEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNP
HHHHHHHHHHHHCCCEEEEECCHHEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCC
MDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENE
CEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHH
IAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHY
HHHHHHCCCCCCEEHHHHCCEEEEEHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCH
RSQINYSEENLKQARAALERLYTAIKDVDLTVTAAPAEEFVAKFKAAMDDDFNTPEAYSV
HCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHH
LFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFKGEGSDDEVAEIEALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHH
VERNRARAEKDWPAADVARNRLNELGVVLEDGPSGTTWRKK
HHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
PMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAG
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
YEVNFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHI
CEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNP
HHHHHHHHHHHHCCCEEEEECCHHEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCC
MDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENE
CEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHH
IAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHY
HHHHHHCCCCCCEEHHHHCCEEEEEHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCH
RSQINYSEENLKQARAALERLYTAIKDVDLTVTAAPAEEFVAKFKAAMDDDFNTPEAYSV
HCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHH
LFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFKGEGSDDEVAEIEALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHH
VERNRARAEKDWPAADVARNRLNELGVVLEDGPSGTTWRKK
HHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA