Click here to switch to the map view.

The map label for this gene is 117921012

Identifier: 117921012

GI number: 117921012

Start: 3075072

End: 3075878

Strand: Reverse

Name: 117921012

Synonym: Shewana3_2571

Alternate gene names: NA

Gene position: 3075878-3075072 (Counterclockwise)

Preceding gene: 117921015

Following gene: 117921011

Centisome position: 61.86

GC content: 49.57

Gene sequence:

>807_bases
ATGCATCATCAATATCTTAATGAACCTATGGTACTCGATGTTGGGCAGAGCTCGACACTGTCCTTAACCTTGCCCAGCAA
TATCAGCGATTTTATTGTGCTTGAGGCGATGGGGGCACCATTGCTTGAGTTGATTGTGGTGTCTGAAACACCGCAGCCGC
AGATTGCCATTCGCTTTCAACCTATTTTGGGACTCAAACTCAATGCCGAGATAGTGGAAGCGACAAGTTTTGCAGCATCA
ACGTCAAGATCTTTGGGGCAAGGAGTCCGGCTCTACCATCGTCTAGGCACTGCACCCAAATTTTGCGCGCAGGAACTGCG
CGCGGGCATTGCCATTAAGGTCGATGCGCAGGCCGGGATCAGTGTGTCACTGCAAGCGGCATCTAAATTTGAGCTCGTCG
CACTCGAGTCCGATGGCCGAGGTTTGCATGAGCCGAAAGTGTTGATGATGGCGAAAGCGATATTAGCGCGGGAATATGAC
TATAATGCTACCGCTGAATCCTTGGCCGTATGCTTGACTGAAATAGAACAAGTTCGGCTCGAGCTACAAGCGTTTTTACG
GGGAGACTTGGGGCATTGTCATACGGGGTTAGCCGAAGAGGCTGTGCGACTTGATCCCTTGCTGCAACAAAAGCGCCAAT
GGTTATTTCGCACTTATACTCATATGTTCGAACGACCTAATTTTAGCCGTGCGGCCAATGACGGTTTGAATATCGATAAA
GCCTTAAGGAAGCTCGAATGTTTTGAGCTGCTCGCCTCCCCTGAATTACTGCAAATGGTGGAGCGACTCATGGAAGATGA
GGCATAA

Upstream 100 bases:

>100_bases
AACCGAGATTGAGAAATTATATTGAAAAGATAAGCGCTTAAGAGGTGATCTTTACCTCGGTTGGCAGTTACAATTCCCTT
CAGAACAGGGAATAAGTCTT

Downstream 100 bases:

>100_bases
GCCAGCCATTCCAATCATTTATAGAGTTAACCAATGCAATATATATGTCCTTTGTGTGCCTTACCGCTCACCTTGACTGA
ACGAACTTGGGGATGCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MHHQYLNEPMVLDVGQSSTLSLTLPSNISDFIVLEAMGAPLLELIVVSETPQPQIAIRFQPILGLKLNAEIVEATSFAAS
TSRSLGQGVRLYHRLGTAPKFCAQELRAGIAIKVDAQAGISVSLQAASKFELVALESDGRGLHEPKVLMMAKAILAREYD
YNATAESLAVCLTEIEQVRLELQAFLRGDLGHCHTGLAEEAVRLDPLLQQKRQWLFRTYTHMFERPNFSRAANDGLNIDK
ALRKLECFELLASPELLQMVERLMEDEA

Sequences:

>Translated_268_residues
MHHQYLNEPMVLDVGQSSTLSLTLPSNISDFIVLEAMGAPLLELIVVSETPQPQIAIRFQPILGLKLNAEIVEATSFAAS
TSRSLGQGVRLYHRLGTAPKFCAQELRAGIAIKVDAQAGISVSLQAASKFELVALESDGRGLHEPKVLMMAKAILAREYD
YNATAESLAVCLTEIEQVRLELQAFLRGDLGHCHTGLAEEAVRLDPLLQQKRQWLFRTYTHMFERPNFSRAANDGLNIDK
ALRKLECFELLASPELLQMVERLMEDEA
>Mature_268_residues
MHHQYLNEPMVLDVGQSSTLSLTLPSNISDFIVLEAMGAPLLELIVVSETPQPQIAIRFQPILGLKLNAEIVEATSFAAS
TSRSLGQGVRLYHRLGTAPKFCAQELRAGIAIKVDAQAGISVSLQAASKFELVALESDGRGLHEPKVLMMAKAILAREYD
YNATAESLAVCLTEIEQVRLELQAFLRGDLGHCHTGLAEEAVRLDPLLQQKRQWLFRTYTHMFERPNFSRAANDGLNIDK
ALRKLECFELLASPELLQMVERLMEDEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29727; Mature: 29727

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHQYLNEPMVLDVGQSSTLSLTLPSNISDFIVLEAMGAPLLELIVVSETPQPQIAIRFQ
CCCCCCCCCEEEECCCCCEEEEEECCCCCHHEEEHHCCCCCEEEEEECCCCCCEEEEEEE
PILGLKLNAEIVEATSFAASTSRSLGQGVRLYHRLGTAPKFCAQELRAGIAIKVDAQAGI
CEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCC
SVSLQAASKFELVALESDGRGLHEPKVLMMAKAILAREYDYNATAESLAVCLTEIEQVRL
EEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ELQAFLRGDLGHCHTGLAEEAVRLDPLLQQKRQWLFRTYTHMFERPNFSRAANDGLNIDK
HHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHH
ALRKLECFELLASPELLQMVERLMEDEA
HHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHHQYLNEPMVLDVGQSSTLSLTLPSNISDFIVLEAMGAPLLELIVVSETPQPQIAIRFQ
CCCCCCCCCEEEECCCCCEEEEEECCCCCHHEEEHHCCCCCEEEEEECCCCCCEEEEEEE
PILGLKLNAEIVEATSFAASTSRSLGQGVRLYHRLGTAPKFCAQELRAGIAIKVDAQAGI
CEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCC
SVSLQAASKFELVALESDGRGLHEPKVLMMAKAILAREYDYNATAESLAVCLTEIEQVRL
EEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ELQAFLRGDLGHCHTGLAEEAVRLDPLLQQKRQWLFRTYTHMFERPNFSRAANDGLNIDK
HHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHH
ALRKLECFELLASPELLQMVERLMEDEA
HHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA