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The map label for this gene is hyaC [C]

Identifier: 117920953

GI number: 117920953

Start: 3000734

End: 3001480

Strand: Direct

Name: hyaC [C]

Synonym: Shewana3_2510

Alternate gene names: 117920953

Gene position: 3000734-3001480 (Clockwise)

Preceding gene: 117920951

Following gene: 117920956

Centisome position: 60.35

GC content: 48.46

Gene sequence:

>747_bases
ATGTCCAACCCGCAGCCAAGCTCTATTGAAATGCAGTCCTATCGCGTGTGGGACAGACCCACGCGTCTGTTCCACTGGAT
TAATCTCATCCTCGTACTCGCCCTGCTTATCGTTGGCGGCATGATGATGTTTCGCAGCAACTTAGGCATTACCGAACTCT
CCGGCAAAATTGGGCTTAAGACCCTGCACGTCATCATTGGCTATGGCTTTGCAATTAATTTACTGATCCGCCTAGTTTGG
GGTTTTATGGGCAATAAATTCGCCCGCTTTAGCCATATGTTCCCCAATGCCAATAGCAAGAACGAGTTACAAAACTATAA
AGCGGAACTTGCCGCGGGTAAAAATCCCCAGTATCTAGGCCACAATCCTAAGGGGAAATTCGCCGTACTCGCCATCATGC
TCTTGCTTGTCACCATAATGATCACAGGCCTGATTCGCGCAGGTACTGATATTTACTATCCGCCGCTCGGCAGCACAGTA
CAAAGCTACTTAGCCGCAGCGGATGTTGAGCCAAGTAGCTTAAAACCCTACGATGCTACAGGCGTAGATACCGATAAAGC
CAATGCTATCAAGCCCATGAAGGGACTTGCCGGTGAAGTACACGTTTACGCCGTGTACTTATTAATGCTCCTTATCGTGC
TGCATGTGTTTGCCGTGATTTATACCGAAATCAAACGCCAACCCGGGATCATTTCCGCCATGTTTTCTGGCAAAAAACTG
ATCCAAGGACAACCGAAGGACGAGTGA

Upstream 100 bases:

>100_bases
GAGCATTGTCAATCAGAAGGCTGAATTTAAACTGAAAATAATGCGCTATTTTTAATAGAAAGGCGTAAGATCAAATCAAC
ACAAATCATAAGGAAATACC

Downstream 100 bases:

>100_bases
GATCAATCATGCCTATAAAAAACGCCAGCAATTGCTGGCGTTTTTTATCAAACTGATGCCGAAGTAGGATTACTTCTTCA
GGATAGATTCTGGAGTACGA

Product: cytochrome B561

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: Cytochrome; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type Subunit

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSNPQPSSIEMQSYRVWDRPTRLFHWINLILVLALLIVGGMMMFRSNLGITELSGKIGLKTLHVIIGYGFAINLLIRLVW
GFMGNKFARFSHMFPNANSKNELQNYKAELAAGKNPQYLGHNPKGKFAVLAIMLLLVTIMITGLIRAGTDIYYPPLGSTV
QSYLAAADVEPSSLKPYDATGVDTDKANAIKPMKGLAGEVHVYAVYLLMLLIVLHVFAVIYTEIKRQPGIISAMFSGKKL
IQGQPKDE

Sequences:

>Translated_248_residues
MSNPQPSSIEMQSYRVWDRPTRLFHWINLILVLALLIVGGMMMFRSNLGITELSGKIGLKTLHVIIGYGFAINLLIRLVW
GFMGNKFARFSHMFPNANSKNELQNYKAELAAGKNPQYLGHNPKGKFAVLAIMLLLVTIMITGLIRAGTDIYYPPLGSTV
QSYLAAADVEPSSLKPYDATGVDTDKANAIKPMKGLAGEVHVYAVYLLMLLIVLHVFAVIYTEIKRQPGIISAMFSGKKL
IQGQPKDE
>Mature_247_residues
SNPQPSSIEMQSYRVWDRPTRLFHWINLILVLALLIVGGMMMFRSNLGITELSGKIGLKTLHVIIGYGFAINLLIRLVWG
FMGNKFARFSHMFPNANSKNELQNYKAELAAGKNPQYLGHNPKGKFAVLAIMLLLVTIMITGLIRAGTDIYYPPLGSTVQ
SYLAAADVEPSSLKPYDATGVDTDKANAIKPMKGLAGEVHVYAVYLLMLLIVLHVFAVIYTEIKRQPGIISAMFSGKKLI
QGQPKDE

Specific function: Probable B-Type Cytochrome. [C]

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27470; Mature: 27339

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPQPSSIEMQSYRVWDRPTRLFHWINLILVLALLIVGGMMMFRSNLGITELSGKIGLK
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHH
TLHVIIGYGFAINLLIRLVWGFMGNKFARFSHMFPNANSKNELQNYKAELAAGKNPQYLG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
HNPKGKFAVLAIMLLLVTIMITGLIRAGTDIYYPPLGSTVQSYLAAADVEPSSLKPYDAT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCC
GVDTDKANAIKPMKGLAGEVHVYAVYLLMLLIVLHVFAVIYTEIKRQPGIISAMFSGKKL
CCCCCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHH
IQGQPKDE
HCCCCCCC
>Mature Secondary Structure 
SNPQPSSIEMQSYRVWDRPTRLFHWINLILVLALLIVGGMMMFRSNLGITELSGKIGLK
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHH
TLHVIIGYGFAINLLIRLVWGFMGNKFARFSHMFPNANSKNELQNYKAELAAGKNPQYLG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
HNPKGKFAVLAIMLLLVTIMITGLIRAGTDIYYPPLGSTVQSYLAAADVEPSSLKPYDAT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCC
GVDTDKANAIKPMKGLAGEVHVYAVYLLMLLIVLHVFAVIYTEIKRQPGIISAMFSGKKL
CCCCCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHH
IQGQPKDE
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA