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The map label for this gene is deoD3 [H]

Identifier: 117920946

GI number: 117920946

Start: 2994813

End: 2995517

Strand: Reverse

Name: deoD3 [H]

Synonym: Shewana3_2503

Alternate gene names: 117920946

Gene position: 2995517-2994813 (Counterclockwise)

Preceding gene: 117920947

Following gene: 117920945

Centisome position: 60.25

GC content: 48.23

Gene sequence:

>705_bases
ATGACTGCGCACATTAATGCACAACCTACTGATTTTGCTGAAACTGTTATTATGCCTGGCGATCCGCTACGGGCGAAATA
TATTGCCGAAACCTACCTTACTGATGCCGTAGAAGTCACCAACGTTCGCAATATGCTGGGCTACACAGGTTATTACCAAG
GGCAGCGTATTTCTGTAATGGGGCACGGTATGGGGATTTCCTCAATGGTGCTCTATGGCCATGAGTTGATTAATTTTTTT
GGTGTGAAGCGCATCATTCGTATCGGCAGTTTAGGCGCAACCCAAAAACACGTGCAAATGCGGGATGTGATTTTAGCGCA
GGCGGCGGGTACCGACTCACCCACGAATGCCAAGCGTAGCAGTGGCTATCATATGGCAACCTCGGCCACCTTTTCCTTAC
TGCACAAAGCCTATACCCAAGCCAATGAAAAAGGCATTAGCGTGAAAGTTGGCAACGTATTTAGTGGCGATCTTTATTAT
GATCCCGACGAAGATATGATCCCAGCACTGGAGCGTTTTGGGGTATTGGGTATCGATATGGAAGTCGCGGGTCTTTATGG
CTTAGCGCATCAACAGGGCATTGAATCATTGGCCATTCTCACGGTATCCGATCATTGCCTAACGGGTGAGGAAACCACCG
CCGAAGAACGCCAGTTATCCTTCAATAATATGATCGAACTTGCGCTCGCGACTGCGCTGAATTAG

Upstream 100 bases:

>100_bases
ACGGAAAAACTCAAACAGCGACAGAAAAGCGGACTTTAGTCCTAAAACTATTTCAGGGTTGAGCACTACTATCAGCATAA
TATTAGATGAGGATAGACCT

Downstream 100 bases:

>100_bases
GTCTCTCGTTAACCTTTGCACCTTTCGCATTTCACGATGGAATGACAAAAATGAATAATAAAATCACCTTAACTGCCATT
AGTTTTCTCGCGAACTTTAT

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTAHINAQPTDFAETVIMPGDPLRAKYIAETYLTDAVEVTNVRNMLGYTGYYQGQRISVMGHGMGISSMVLYGHELINFF
GVKRIIRIGSLGATQKHVQMRDVILAQAAGTDSPTNAKRSSGYHMATSATFSLLHKAYTQANEKGISVKVGNVFSGDLYY
DPDEDMIPALERFGVLGIDMEVAGLYGLAHQQGIESLAILTVSDHCLTGEETTAEERQLSFNNMIELALATALN

Sequences:

>Translated_234_residues
MTAHINAQPTDFAETVIMPGDPLRAKYIAETYLTDAVEVTNVRNMLGYTGYYQGQRISVMGHGMGISSMVLYGHELINFF
GVKRIIRIGSLGATQKHVQMRDVILAQAAGTDSPTNAKRSSGYHMATSATFSLLHKAYTQANEKGISVKVGNVFSGDLYY
DPDEDMIPALERFGVLGIDMEVAGLYGLAHQQGIESLAILTVSDHCLTGEETTAEERQLSFNNMIELALATALN
>Mature_233_residues
TAHINAQPTDFAETVIMPGDPLRAKYIAETYLTDAVEVTNVRNMLGYTGYYQGQRISVMGHGMGISSMVLYGHELINFFG
VKRIIRIGSLGATQKHVQMRDVILAQAAGTDSPTNAKRSSGYHMATSATFSLLHKAYTQANEKGISVKVGNVFSGDLYYD
PDEDMIPALERFGVLGIDMEVAGLYGLAHQQGIESLAILTVSDHCLTGEETTAEERQLSFNNMIELALATALN

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=232, Percent_Identity=54.7413793103448, Blast_Score=267, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 25471; Mature: 25340

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAHINAQPTDFAETVIMPGDPLRAKYIAETYLTDAVEVTNVRNMLGYTGYYQGQRISVM
CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GHGMGISSMVLYGHELINFFGVKRIIRIGSLGATQKHVQMRDVILAQAAGTDSPTNAKRS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SGYHMATSATFSLLHKAYTQANEKGISVKVGNVFSGDLYYDPDEDMIPALERFGVLGIDM
CCCEEHHHHHHHHHHHHHHHHCCCCCEEEECCEEECCEEECCCCHHHHHHHHCCEEEECH
EVAGLYGLAHQQGIESLAILTVSDHCLTGEETTAEERQLSFNNMIELALATALN
HHHHHHHHHHHHCCCEEEEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAHINAQPTDFAETVIMPGDPLRAKYIAETYLTDAVEVTNVRNMLGYTGYYQGQRISVM
CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GHGMGISSMVLYGHELINFFGVKRIIRIGSLGATQKHVQMRDVILAQAAGTDSPTNAKRS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SGYHMATSATFSLLHKAYTQANEKGISVKVGNVFSGDLYYDPDEDMIPALERFGVLGIDM
CCCEEHHHHHHHHHHHHHHHHCCCCCEEEECCEEECCEEECCCCHHHHHHHHCCEEEECH
EVAGLYGLAHQQGIESLAILTVSDHCLTGEETTAEERQLSFNNMIELALATALN
HHHHHHHHHHHHCCCEEEEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]