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The map label for this gene is rhtB [H]

Identifier: 117920928

GI number: 117920928

Start: 2971905

End: 2972528

Strand: Direct

Name: rhtB [H]

Synonym: Shewana3_2485

Alternate gene names: 117920928

Gene position: 2971905-2972528 (Clockwise)

Preceding gene: 117920925

Following gene: 117920930

Centisome position: 59.77

GC content: 50.0

Gene sequence:

>624_bases
ATGCCAGATTTTGCCTTACTCGCTGTGTTTATCCCGACCTTTTTCTTTGTTTCTATCACCCCCGGTATGTGTATGACACT
CGCCATGACGCTTGGGATGAGCATTGGTGTGCGTCGTACCCTGTGGATGATGCTCGGCGAGCTTGTGGGTGTGGCCTTGG
TCGCTACCGCTGCGGTCATGGGGGTGGCGAGTATTATGCTTAACTACCCTGCGGTTTTTCAGGTATTTAAATGGGTTGGT
GGCATTTACTTAGGCTATATCGGCGTGCAGATGTGGCGCGCACGAGGTAAGATGGCCATGCTTAGCGATGATGACACTAA
CCCAAGAGCCAGTAACTTTACGCTGATTTCACAGGGGTTTATTACCGCCATTGCTAACCCTAAGGGTTGGGCGTTTATGG
TGTCGCTATTACCGCCATTTATTAATGCCGAGCGCGAGGTTGCGCCGCAACTCCTAGCCCTACTTAGCATTATTATGGTG
ACAGAATTTACTTCTATGTTGGCCTACGCCAGTGGCGGTAAGAGTCTGAGAATATTTTTAAGTCGCGGCGATAATATTCG
TTGGCTAAATCGTATCGCCGGCAGCCTTATGATTGGCGTTGGCATCTGGTTAGCGGTGAGCTAG

Upstream 100 bases:

>100_bases
CAGAGTTCGATTTAGCCAGAGTGCGATTTAGCCGATTGGCTAACTCTCTCATTTTCATTACACTAGCGTTCCTTCACTCT
TCTAGTAGACCGTTTAGACC

Downstream 100 bases:

>100_bases
TTAAACATGCTGTCTTGAGTGATATGTGTTTAGTACATCACTCTTTTGTGTAAACCCATTCGCGTCGCGCCAGCGTATTT
GTTGACGCGACGCTCTACGT

Product: lysine exporter protein LysE/YggA

Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MPDFALLAVFIPTFFFVSITPGMCMTLAMTLGMSIGVRRTLWMMLGELVGVALVATAAVMGVASIMLNYPAVFQVFKWVG
GIYLGYIGVQMWRARGKMAMLSDDDTNPRASNFTLISQGFITAIANPKGWAFMVSLLPPFINAEREVAPQLLALLSIIMV
TEFTSMLAYASGGKSLRIFLSRGDNIRWLNRIAGSLMIGVGIWLAVS

Sequences:

>Translated_207_residues
MPDFALLAVFIPTFFFVSITPGMCMTLAMTLGMSIGVRRTLWMMLGELVGVALVATAAVMGVASIMLNYPAVFQVFKWVG
GIYLGYIGVQMWRARGKMAMLSDDDTNPRASNFTLISQGFITAIANPKGWAFMVSLLPPFINAEREVAPQLLALLSIIMV
TEFTSMLAYASGGKSLRIFLSRGDNIRWLNRIAGSLMIGVGIWLAVS
>Mature_206_residues
PDFALLAVFIPTFFFVSITPGMCMTLAMTLGMSIGVRRTLWMMLGELVGVALVATAAVMGVASIMLNYPAVFQVFKWVGG
IYLGYIGVQMWRARGKMAMLSDDDTNPRASNFTLISQGFITAIANPKGWAFMVSLLPPFINAEREVAPQLLALLSIIMVT
EFTSMLAYASGGKSLRIFLSRGDNIRWLNRIAGSLMIGVGIWLAVS

Specific function: Conducts the efflux of homoserine and homoserine lactone [H]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI48994979, Length=196, Percent_Identity=27.0408163265306, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22559; Mature: 22428

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFALLAVFIPTFFFVSITPGMCMTLAMTLGMSIGVRRTLWMMLGELVGVALVATAAVM
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVASIMLNYPAVFQVFKWVGGIYLGYIGVQMWRARGKMAMLSDDDTNPRASNFTLISQGF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCC
ITAIANPKGWAFMVSLLPPFINAEREVAPQLLALLSIIMVTEFTSMLAYASGGKSLRIFL
EEEECCCCCHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SRGDNIRWLNRIAGSLMIGVGIWLAVS
ECCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDFALLAVFIPTFFFVSITPGMCMTLAMTLGMSIGVRRTLWMMLGELVGVALVATAAVM
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVASIMLNYPAVFQVFKWVGGIYLGYIGVQMWRARGKMAMLSDDDTNPRASNFTLISQGF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCC
ITAIANPKGWAFMVSLLPPFINAEREVAPQLLALLSIIMVTEFTSMLAYASGGKSLRIFL
EEEECCCCCHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SRGDNIRWLNRIAGSLMIGVGIWLAVS
ECCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]