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The map label for this gene is 117920867

Identifier: 117920867

GI number: 117920867

Start: 2906396

End: 2907271

Strand: Reverse

Name: 117920867

Synonym: Shewana3_2424

Alternate gene names: NA

Gene position: 2907271-2906396 (Counterclockwise)

Preceding gene: 117920869

Following gene: 117920866

Centisome position: 58.47

GC content: 49.09

Gene sequence:

>876_bases
ATGCAACTGTTTGTAAAAGATTTAACCGTGATCGATTTTTCCTATCTTTGCCCCAAGCGTGGCATGGTAGGGGAAAGCTG
GATTGTCGATGTGGTATTAGAAGGCGGCCTAGACGAGCAAAATATGGTGCTCGATTTCGCTAGAGTGAAACGAACCATTA
AGCAGACTATTGATGCGGTGGCCGATCATCGTTTATTGGTGCCGACCGCCTACAGTGGCGTGCGTTGGCAGCAGCAGGGC
GATCGGGTGTGGATGGATTTCGATAGCGCGCTCGGTGAGATCCACTTAGCTTGTCCTTCCCAAGCCTTTGCACTCGTTCC
ATCGGAACAGATTGATATTCCAAGCGTTAATGCCTTTTTACAAAAAGCACTGCGGGAAACTCTGCCCGATAATGTTGAAG
GTATTAGCCTCACCTTAAGACATGAGATCCTGAACTCGCCTTACTATCATTACAGCCATGGTTTACGTAAACACGATGGC
AATTGCCAGCGGATAGCCCATGGTCATCGCAGCCCGGTTCAAGTGTTTGAAAACGGCATTCCGGCACCGAAATGGGATGA
ATATTGGGCCAAGCGTTGGCACGATATCTACCTCGGTAGTGAAGAGGATTTAGTGTCAGTAAAGACCTTAAACCTGTCGC
CACAAACGCGGATCAGTGATGACAGCCATTATGGCTTTCACTATCAAGCGCCGCAGGGGGATTTCCAACTGGCCATGCCC
AAGGAATGTTGTGATTTGATCCCGCACGATACCACGGTTGAATTGCTGGCCGACTATATGGCGACCACCTTAGTGGCAAA
AGTGCCTTCAAGCCAATTTACTGTGATTGCCTACGAAGGCGTGGGGAAAGGCGCCATCGTAAGTAAAGGCAATTAA

Upstream 100 bases:

>100_bases
GTTTGGGTAAGCTTGGTGTAAGACCAAGTGAGCGTGCTCGGCCATCGCTAAGTGGCGCAATCCCTATTAAGGCGGACTGT
TTTTCTGCCGAGGAGAGTCA

Downstream 100 bases:

>100_bases
CCCGTCGATTTTTTATAACGCCCTAATCTTTAGGGCGTTATTGTTTGAATAAGGATTTTTGAGAAGATGCTAAACGCTTT
ACCAAATGCGCTACCTAAGT

Product: isocitrate dehydrogenase (NADP(+))

Products: NA

Alternate protein names: 6-Pyruvoyl-Tetrahydropterin Synthase

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVVLEGGLDEQNMVLDFARVKRTIKQTIDAVADHRLLVPTAYSGVRWQQQG
DRVWMDFDSALGEIHLACPSQAFALVPSEQIDIPSVNAFLQKALRETLPDNVEGISLTLRHEILNSPYYHYSHGLRKHDG
NCQRIAHGHRSPVQVFENGIPAPKWDEYWAKRWHDIYLGSEEDLVSVKTLNLSPQTRISDDSHYGFHYQAPQGDFQLAMP
KECCDLIPHDTTVELLADYMATTLVAKVPSSQFTVIAYEGVGKGAIVSKGN

Sequences:

>Translated_291_residues
MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVVLEGGLDEQNMVLDFARVKRTIKQTIDAVADHRLLVPTAYSGVRWQQQG
DRVWMDFDSALGEIHLACPSQAFALVPSEQIDIPSVNAFLQKALRETLPDNVEGISLTLRHEILNSPYYHYSHGLRKHDG
NCQRIAHGHRSPVQVFENGIPAPKWDEYWAKRWHDIYLGSEEDLVSVKTLNLSPQTRISDDSHYGFHYQAPQGDFQLAMP
KECCDLIPHDTTVELLADYMATTLVAKVPSSQFTVIAYEGVGKGAIVSKGN
>Mature_291_residues
MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVVLEGGLDEQNMVLDFARVKRTIKQTIDAVADHRLLVPTAYSGVRWQQQG
DRVWMDFDSALGEIHLACPSQAFALVPSEQIDIPSVNAFLQKALRETLPDNVEGISLTLRHEILNSPYYHYSHGLRKHDG
NCQRIAHGHRSPVQVFENGIPAPKWDEYWAKRWHDIYLGSEEDLVSVKTLNLSPQTRISDDSHYGFHYQAPQGDFQLAMP
KECCDLIPHDTTVELLADYMATTLVAKVPSSQFTVIAYEGVGKGAIVSKGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32754; Mature: 32754

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVVLEGGLDEQNMVLDFARVKRTIKQTIDAV
CEEEECHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
ADHRLLVPTAYSGVRWQQQGDRVWMDFDSALGEIHLACPSQAFALVPSEQIDIPSVNAFL
HCCEEEEECCCCCCEECCCCCEEEEEHHCCCCEEEEECCCCEEEECCCCCCCCCHHHHHH
QKALRETLPDNVEGISLTLRHEILNSPYYHYSHGLRKHDGNCQRIAHGHRSPVQVFENGI
HHHHHHHCCCCCCCEEEEEEHHHHCCCCHHHHCCCCCCCCCHHHHHCCCCCHHHHHHCCC
PAPKWDEYWAKRWHDIYLGSEEDLVSVKTLNLSPQTRISDDSHYGFHYQAPQGDFQLAMP
CCCCHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEECC
KECCDLIPHDTTVELLADYMATTLVAKVPSSQFTVIAYEGVGKGAIVSKGN
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCC
>Mature Secondary Structure
MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVVLEGGLDEQNMVLDFARVKRTIKQTIDAV
CEEEECHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
ADHRLLVPTAYSGVRWQQQGDRVWMDFDSALGEIHLACPSQAFALVPSEQIDIPSVNAFL
HCCEEEEECCCCCCEECCCCCEEEEEHHCCCCEEEEECCCCEEEECCCCCCCCCHHHHHH
QKALRETLPDNVEGISLTLRHEILNSPYYHYSHGLRKHDGNCQRIAHGHRSPVQVFENGI
HHHHHHHCCCCCCCEEEEEEHHHHCCCCHHHHCCCCCCCCCHHHHHCCCCCHHHHHHCCC
PAPKWDEYWAKRWHDIYLGSEEDLVSVKTLNLSPQTRISDDSHYGFHYQAPQGDFQLAMP
CCCCHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEECC
KECCDLIPHDTTVELLADYMATTLVAKVPSSQFTVIAYEGVGKGAIVSKGN
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA